FC923131

Overview
NameFC923131
Unique NameFC923131
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length736
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923131 vs. ExPASy Swiss-Prot
Match: DNAJ_THEMA (Chaperone protein dnaJ OS=Thermotoga maritima GN=dnaJ PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.661e-12
Identity = 35/72 (48.61%), Postives = 50/72 (69.44%), Query Frame = 3
Query:   72 RKVQPSYYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPPLLGKAKVKFQEIQEAYSVLSDERKRTLYD 287
            +K +  YY +LGV   ++ EEI+RAY++L  +WHPDR    P    +A+ +F+EIQEAY VLSD +KR +YD
Sbjct:    2 KKEKKDYYEILGVPRDATQEEIKRAYKRLVKEWHPDR---HPENRKEAEQRFKEIQEAYEVLSDPQKRAMYD 70          
BLAST of FC923131 vs. ExPASy Swiss-Prot
Match: DNAJ_THENN (Chaperone protein dnaJ OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.169e-12
Identity = 34/72 (47.22%), Postives = 51/72 (70.83%), Query Frame = 3
Query:   72 RKVQPSYYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPPLLGKAKVKFQEIQEAYSVLSDERKRTLYD 287
            ++ +  YY +LGV  +++ EEIR+AY++L  +WHPDR    P    +A+ +F+EIQEAY VLSD +KR +YD
Sbjct:    2 KREKKDYYEILGVPRNATQEEIRKAYKRLVKEWHPDR---HPENRKEAEQRFKEIQEAYEVLSDPQKRAMYD 70          
BLAST of FC923131 vs. ExPASy Swiss-Prot
Match: DNAJ_METSS (Chaperone protein dnaJ OS=Methylovorus sp. (strain SS1 / DSM 11726) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.169e-12
Identity = 37/66 (56.06%), Postives = 48/66 (72.73%), Query Frame = 3
Query:   90 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPPLLGKAKVKFQEIQEAYSVLSDERKRTLYD 287
            YY VLGV+  +S EEI+++YRKLAM++HPDR    P    KA+  F+E +EAY VLSDE+KR  YD
Sbjct:    6 YYEVLGVNRDASDEEIKKSYRKLAMKYHPDRNPDNP----KAEESFKEAKEAYEVLSDEQKRAAYD 67          
BLAST of FC923131 vs. ExPASy Swiss-Prot
Match: DNAJ_METMA (Chaperone protein dnaJ OS=Methanosarcina mazei GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.169e-12
Identity = 38/66 (57.58%), Postives = 48/66 (72.73%), Query Frame = 3
Query:   90 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPPLLGKAKVKFQEIQEAYSVLSDERKRTLYD 287
            YY +LG+S  SSVE+I++ YRKLA+Q+HPDR  K P     A+ KF+EI EAY+VLSD  KR  YD
Sbjct:    7 YYEILGLSKDSSVEDIKKTYRKLALQYHPDR-NKEP----GAEEKFKEISEAYAVLSDAEKRAQYD 67          
BLAST of FC923131 vs. ExPASy Swiss-Prot
Match: DNJC7_DICDI (DnaJ homolog subfamily C member 7 homolog OS=Dictyostelium discoideum GN=dnajc7 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.833e-12
Identity = 36/89 (40.45%), Postives = 57/89 (64.04%), Query Frame = 3
Query:   30 EAEHKL*NMEAESERKVQPSYYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTP-PLLGKAKVKFQEIQEAYSVLSDERKRTLYDAG 293
            E +  +   +   ++ ++  YY +LGVS  +   EI++AYRKLA+Q+HPD+  + P     +A+  F++I EAYSVLSDE+K+  YD G
Sbjct:  342 ELQRNIKEAKIAHKKSLRKDYYKILGVSKEAGETEIKKAYRKLALQYHPDKNNQLPEEEKAQAEKMFKDIGEAYSVLSDEKKKRQYDMG 430          
BLAST of FC923131 vs. ExPASy Swiss-Prot
Match: DNJB7_MOUSE (DnaJ homolog subfamily B member 7 OS=Mus musculus GN=Dnajb7 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.833e-12
Identity = 35/66 (53.03%), Postives = 48/66 (72.73%), Query Frame = 3
Query:   90 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPPLLGKAKVKFQEIQEAYSVLSDERKRTLYD 287
            YY VLGV  ++S E+I+RAYRK+A++WHPD   K P    +A+ KF+E+ EAY VLS+  KR +YD
Sbjct:    4 YYEVLGVQRYASPEDIKRAYRKVALKWHPD---KNPENKEEAERKFKEVAEAYEVLSNVEKRDIYD 66          
BLAST of FC923131 vs. ExPASy Swiss-Prot
Match: DNAJ2_THET8 (Chaperone protein dnaJ 2 OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=dnaJ2 PE=3 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.833e-12
Identity = 43/99 (43.43%), Postives = 60/99 (60.61%), Query Frame = 3
Query:   90 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPPLLGKAKVKFQEIQEAYSVLSDERKRTLYDA------------GLYDPXXXXXXGFSDFVQEM 350
            YY++LGV  +++ EEI+RAY++LA Q+HPD   K+P    +A+ KF+EI EAY+VLSD  KR +YD             G YD        FS+F QE+
Sbjct:    7 YYAILGVPRNATQEEIKRAYKRLARQYHPD-VNKSP----EAEEKFKEINEAYAVLSDPEKRRIYDTYGTTEAPPPPPPGGYDFSGFDVEDFSEFFQEL 100          
BLAST of FC923131 vs. ExPASy Swiss-Prot
Match: DNJB3_MOUSE (DnaJ homolog subfamily B member 3 OS=Mus musculus GN=Dnajb3 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.699e-12
Identity = 35/66 (53.03%), Postives = 47/66 (71.21%), Query Frame = 3
Query:   90 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPPLLGKAKVKFQEIQEAYSVLSDERKRTLYD 287
            YY VLGV   +S E IR+AYRKLA++WHPD   K P    +A+ +F+++ +AY VLSD RKR +YD
Sbjct:    4 YYEVLGVPRQASAEAIRKAYRKLALKWHPD---KNPEHKEEAERRFKQVAQAYEVLSDVRKREVYD 66          
BLAST of FC923131 vs. ExPASy Swiss-Prot
Match: DNJB3_MACFU (DnaJ homolog subfamily B member 3 OS=Macaca fuscata fuscata GN=DNAJB3 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.699e-12
Identity = 34/67 (50.75%), Postives = 48/67 (71.64%), Query Frame = 3
Query:   87 SYYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPPLLGKAKVKFQEIQEAYSVLSDERKRTLYD 287
            +YY VLGV V    E+I++AYRKLA++WHPD   K P    +A+ +F+++ EAY VLSD +KR +YD
Sbjct:    3 NYYEVLGVQVQRFPEDIKKAYRKLALKWHPD---KNPDNKEEAERRFKQVAEAYEVLSDAKKRDVYD 66          
BLAST of FC923131 vs. ExPASy Swiss-Prot
Match: DNAJ_THEP1 (Chaperone protein dnaJ OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.699e-12
Identity = 34/72 (47.22%), Postives = 50/72 (69.44%), Query Frame = 3
Query:   72 RKVQPSYYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPPLLGKAKVKFQEIQEAYSVLSDERKRTLYD 287
            ++ +  YY +LGV   ++ EEI+RAY++L  +WHPDR    P    +A+ +F+EIQEAY VLSD +KR +YD
Sbjct:    2 KREKKDYYEILGVPRDATQEEIKRAYKRLVKEWHPDR---HPENRKEAEQRFKEIQEAYEVLSDPQKRAMYD 70          
The following BLAST results are available for this feature:
BLAST of FC923131 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
DNAJ_THEMA1.661e-1248.61Chaperone protein dnaJ OS=Thermotoga maritima GN=d... [more]
DNAJ_THENN2.169e-1247.22Chaperone protein dnaJ OS=Thermotoga neapolitana (... [more]
DNAJ_METSS2.169e-1256.06Chaperone protein dnaJ OS=Methylovorus sp. (strain... [more]
DNAJ_METMA2.169e-1257.58Chaperone protein dnaJ OS=Methanosarcina mazei GN=... [more]
DNJC7_DICDI2.833e-1240.45DnaJ homolog subfamily C member 7 homolog OS=Dicty... [more]
DNJB7_MOUSE2.833e-1253.03DnaJ homolog subfamily B member 7 OS=Mus musculus ... [more]
DNAJ2_THET82.833e-1243.43Chaperone protein dnaJ 2 OS=Thermus thermophilus (... [more]
DNJB3_MOUSE3.699e-1253.03DnaJ homolog subfamily B member 3 OS=Mus musculus ... [more]
DNJB3_MACFU3.699e-1250.75DnaJ homolog subfamily B member 3 OS=Macaca fuscat... [more]
DNAJ_THEP13.699e-1247.22Chaperone protein dnaJ OS=Thermotoga petrophila (s... [more]

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Properties
Property NameValue
Genbank descriptionC31701D09EF StrClemenN Citrus clementina cDNA clone C31701D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923131 ID=FC923131; Name=FC923131; organism=Citrus clementina; type=EST; length=736bp
GATTCATAACCGCCACGCTTTTGATGTTTGAAGCTGAACACAAATTATGA
AATATGGAGGCAGAGAGTGAAAGGAAAGTGCAGCCATCTTATTACAGCGT
TCTGGGTGTGAGTGTGCACTCTTCTGTTGAAGAAATAAGGCGCGCTTATC
GCAAGCTTGCTATGCAATGGCATCCTGATCGGTGGACAAAGACTCCACCT
TTGTTGGGTAAAGCCAAGGTTAAATTCCAGGAAATTCAAGAAGCCTATTC
TGTTTTGTCAGATGAGAGGAAGAGGACACTATATGATGCTGGGTTATATG
ACCCTGAAGAAGAAGAGGAAGAGGGATTTTCAGATTTTGTGCAAGAAATG
CTGTCTCTAATGGCTGAGGCGAGGAAAGAGGAAAAAAGCTACAGCATGGA
GGAGCTGCAAACAATGTTCATGGAAATGGCACAAGAATTTGAGCAGTCCT
CGTGGTTCTGCGGATACCCAGTTGCTGATGATTCCTGCTCCTTGGAGAGT
ACACAGTGGAATACGAATTTAATAGACAATAATAGAAACGCACAATTTGG
TGCTTTTCCAGGGTGGCAGTTCTATGGAGCAAGTGGTTTTTGCAGATAAA
AGAATCCATTTGGATTCAAGCAGTGGATGCAAGATTTGAACATGAAAACG
AGCAGTGCGCCTCTGATTTTTGCTCTGATTGTTTTTGGTGTGGAGACATC
ACATTTTGTGGGAACGTCTTTGCTCTGATGTCCTCT
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