FC923131

Overview
NameFC923131
Unique NameFC923131
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length736
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923131 vs. ExPASy Swiss-Prot
Match: DNJB2_HUMAN (DnaJ homolog subfamily B member 2 OS=Homo sapiens GN=DNAJB2 PE=2 SV=3)

HSP 1 Score: 68.9366 bits (167), Expect = 3.132e-11
Identity = 33/67 (49.25%), Postives = 46/67 (68.66%), Query Frame = 3
Query:   87 SYYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPPLLGKAKVKFQEIQEAYSVLSDERKRTLYD 287
            SYY +L V   +S ++I++AYR+ A+QWHPD   K P     A+ KF+E+ EAY VLSD+ KR +YD
Sbjct:    3 SYYEILDVPRSASADDIKKAYRRKALQWHPD---KNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYD 66          
BLAST of FC923131 vs. ExPASy Swiss-Prot
Match: DNAJ_ANATD (Chaperone protein dnaJ OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.132e-11
Identity = 36/66 (54.55%), Postives = 46/66 (69.70%), Query Frame = 3
Query:   90 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPPLLGKAKVKFQEIQEAYSVLSDERKRTLYD 287
            YY +LGV  +++ EEI+RAYR+LA Q+HPD      P   +A+ KF+EI EAY VLSD  KR LYD
Sbjct:    7 YYEILGVPRNATEEEIKRAYRRLAKQYHPD----ANPGNKEAEEKFKEINEAYEVLSDPEKRKLYD 68          
BLAST of FC923131 vs. ExPASy Swiss-Prot
Match: DNAJ_AGGAC (Chaperone protein dnaJ OS=Aggregatibacter actinomycetemcomitans GN=dnaJ PE=3 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 3.132e-11
Identity = 36/66 (54.55%), Postives = 48/66 (72.73%), Query Frame = 3
Query:   90 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPPLLGKAKVKFQEIQEAYSVLSDERKRTLYD 287
            YY +LG+S  +  +EI+RAY+KLAMQ+HPDR TK      + + KF+EIQEAY VL+D+ KR  YD
Sbjct:    6 YYELLGISRSADEKEIKRAYKKLAMQYHPDR-TKGDK---EKEEKFKEIQEAYEVLNDKEKRAAYD 67          
BLAST of FC923131 vs. ExPASy Swiss-Prot
Match: DNAJ_ROSS1 (Chaperone protein dnaJ OS=Roseiflexus sp. (strain RS-1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.090e-11
Identity = 36/70 (51.43%), Postives = 49/70 (70.00%), Query Frame = 3
Query:   78 VQPSYYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPPLLGKAKVKFQEIQEAYSVLSDERKRTLYD 287
            V+  YY VLGV  ++S +EI++A+R+LA Q+HPD   K P     A+ KF+EI EAY VLSD  KR++YD
Sbjct:    3 VKRDYYEVLGVQRNASQDEIKKAFRRLARQYHPD-VNKAP----DAEAKFKEINEAYEVLSDPEKRSMYD 67          
BLAST of FC923131 vs. ExPASy Swiss-Prot
Match: DNAJ_ROSCS (Chaperone protein dnaJ OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.090e-11
Identity = 36/70 (51.43%), Postives = 49/70 (70.00%), Query Frame = 3
Query:   78 VQPSYYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPPLLGKAKVKFQEIQEAYSVLSDERKRTLYD 287
            V+  YY VLGV  ++S +EI++A+R+LA Q+HPD   K P     A+ KF+EI EAY VLSD  KR++YD
Sbjct:    3 VKRDYYEVLGVQRNASQDEIKKAFRRLARQYHPD-VNKAP----DAEAKFKEINEAYEVLSDPEKRSMYD 67          
BLAST of FC923131 vs. ExPASy Swiss-Prot
Match: DNAJ_PASMU (Chaperone protein dnaJ OS=Pasteurella multocida GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.090e-11
Identity = 36/66 (54.55%), Postives = 46/66 (69.70%), Query Frame = 3
Query:   90 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPPLLGKAKVKFQEIQEAYSVLSDERKRTLYD 287
            YY VLGV   +  +EI+RAY+KLAM++HPDR      L    + KF+EIQEAY VLSD++KR  YD
Sbjct:    6 YYDVLGVERGADEKEIKRAYKKLAMKYHPDRTQGNKEL----EEKFKEIQEAYEVLSDKQKRANYD 67          
BLAST of FC923131 vs. ExPASy Swiss-Prot
Match: DNAJ_HYDTH (Chaperone protein dnaJ OS=Hydrogenobacter thermophilus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.090e-11
Identity = 36/88 (40.91%), Postives = 51/88 (57.95%), Query Frame = 3
Query:   90 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPPLLGKAKVKFQEIQEAYSVLSDERKRTLYDAGLYDPXXXXXXGFSDFVQEML 353
            YY +LGVS  ++ EEI++AYR+LA ++HPD           A  KF+EI EAY +LSDE +R  YD  L          F +++Q+ L
Sbjct:    6 YYQILGVSKDATAEEIKKAYRRLAKEYHPDISADE-----NASEKFKEINEAYHILSDEERRKEYDRILKSGDEKSYRDFMEYIQDFL 88          
BLAST of FC923131 vs. ExPASy Swiss-Prot
Match: DNAJ_DESVV (Chaperone protein dnaJ OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.090e-11
Identity = 36/69 (52.17%), Postives = 46/69 (66.67%), Query Frame = 3
Query:   81 QPSYYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPPLLGKAKVKFQEIQEAYSVLSDERKRTLYD 287
            Q  YY VLGV+  +S ++I+RAYRKLA+Q+HPDR    P    +A+ KF+E  EAY VL D  KR  YD
Sbjct:    3 QRDYYEVLGVARDASEDDIKRAYRKLALQYHPDRNPDDP----EAEQKFKEAAEAYDVLRDGEKRARYD 67          
BLAST of FC923131 vs. ExPASy Swiss-Prot
Match: DNAJ_DESVH (Chaperone protein dnaJ OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.090e-11
Identity = 36/69 (52.17%), Postives = 46/69 (66.67%), Query Frame = 3
Query:   81 QPSYYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPPLLGKAKVKFQEIQEAYSVLSDERKRTLYD 287
            Q  YY VLGV+  +S ++I+RAYRKLA+Q+HPDR    P    +A+ KF+E  EAY VL D  KR  YD
Sbjct:    3 QRDYYEVLGVARDASEDDIKRAYRKLALQYHPDRNPDDP----EAEQKFKEAAEAYDVLRDGEKRARYD 67          
BLAST of FC923131 vs. ExPASy Swiss-Prot
Match: DNAJ_DESDG (Chaperone protein dnaJ OS=Desulfovibrio desulfuricans (strain G20) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.090e-11
Identity = 41/88 (46.59%), Postives = 51/88 (57.95%), Query Frame = 3
Query:   81 QPSYYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPPLLGKAKVKFQEIQEAYSVLSDERKRTLYD----AGLYDPXXXXXXGFS 332
            Q  YY VLGVS  ++ +EI+RAYRK AM++HPDR    P    +A+ KF+E  EAY VL D  KR  YD    AG+         GFS
Sbjct:    3 QRDYYEVLGVSRDAADDEIKRAYRKKAMEFHPDRNPDNP----EAEAKFKEAAEAYDVLRDAEKRARYDRFGHAGVNGNGYGGGGGFS 86          
The following BLAST results are available for this feature:
BLAST of FC923131 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
DNJB2_HUMAN3.132e-1149.25DnaJ homolog subfamily B member 2 OS=Homo sapiens ... [more]
DNAJ_ANATD3.132e-1154.55Chaperone protein dnaJ OS=Anaerocellum thermophilu... [more]
DNAJ_AGGAC3.132e-1154.55Chaperone protein dnaJ OS=Aggregatibacter actinomy... [more]
DNAJ_ROSS14.090e-1151.43Chaperone protein dnaJ OS=Roseiflexus sp. (strain ... [more]
DNAJ_ROSCS4.090e-1151.43Chaperone protein dnaJ OS=Roseiflexus castenholzii... [more]
DNAJ_PASMU4.090e-1154.55Chaperone protein dnaJ OS=Pasteurella multocida GN... [more]
DNAJ_HYDTH4.090e-1140.91Chaperone protein dnaJ OS=Hydrogenobacter thermoph... [more]
DNAJ_DESVV4.090e-1152.17Chaperone protein dnaJ OS=Desulfovibrio vulgaris s... [more]
DNAJ_DESVH4.090e-1152.17Chaperone protein dnaJ OS=Desulfovibrio vulgaris (... [more]
DNAJ_DESDG4.090e-1146.59Chaperone protein dnaJ OS=Desulfovibrio desulfuric... [more]

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Properties
Property NameValue
Genbank descriptionC31701D09EF StrClemenN Citrus clementina cDNA clone C31701D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923131 ID=FC923131; Name=FC923131; organism=Citrus clementina; type=EST; length=736bp
GATTCATAACCGCCACGCTTTTGATGTTTGAAGCTGAACACAAATTATGA
AATATGGAGGCAGAGAGTGAAAGGAAAGTGCAGCCATCTTATTACAGCGT
TCTGGGTGTGAGTGTGCACTCTTCTGTTGAAGAAATAAGGCGCGCTTATC
GCAAGCTTGCTATGCAATGGCATCCTGATCGGTGGACAAAGACTCCACCT
TTGTTGGGTAAAGCCAAGGTTAAATTCCAGGAAATTCAAGAAGCCTATTC
TGTTTTGTCAGATGAGAGGAAGAGGACACTATATGATGCTGGGTTATATG
ACCCTGAAGAAGAAGAGGAAGAGGGATTTTCAGATTTTGTGCAAGAAATG
CTGTCTCTAATGGCTGAGGCGAGGAAAGAGGAAAAAAGCTACAGCATGGA
GGAGCTGCAAACAATGTTCATGGAAATGGCACAAGAATTTGAGCAGTCCT
CGTGGTTCTGCGGATACCCAGTTGCTGATGATTCCTGCTCCTTGGAGAGT
ACACAGTGGAATACGAATTTAATAGACAATAATAGAAACGCACAATTTGG
TGCTTTTCCAGGGTGGCAGTTCTATGGAGCAAGTGGTTTTTGCAGATAAA
AGAATCCATTTGGATTCAAGCAGTGGATGCAAGATTTGAACATGAAAACG
AGCAGTGCGCCTCTGATTTTTGCTCTGATTGTTTTTGGTGTGGAGACATC
ACATTTTGTGGGAACGTCTTTGCTCTGATGTCCTCT
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