FC923131

Overview
NameFC923131
Unique NameFC923131
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length736
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923131 vs. ExPASy Swiss-Prot
Match: DNAJ_CHRVO (Chaperone protein dnaJ OS=Chromobacterium violaceum GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.090e-11
Identity = 34/66 (51.52%), Postives = 49/66 (74.24%), Query Frame = 3
Query:   90 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPPLLGKAKVKFQEIQEAYSVLSDERKRTLYD 287
            YY VLGV+  +S ++I++AYRKLAM++HPDR     P   +A+ KF+E++EAY +LSD +KR  YD
Sbjct:    6 YYDVLGVNRDASDDDIKKAYRKLAMKYHPDR----NPDSKEAEDKFKEVKEAYEILSDSQKRGAYD 67          
BLAST of FC923131 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLFF (Chaperone protein dnaJ OS=Chlamydophila felis (strain Fe/C-56) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.090e-11
Identity = 35/66 (53.03%), Postives = 48/66 (72.73%), Query Frame = 3
Query:   90 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPPLLGKAKVKFQEIQEAYSVLSDERKRTLYD 287
            YY VLGVS  +S EEI++AYRKLA+++HPD+     P   +A+ +F+E+ EAY VLSD +KR  YD
Sbjct:    3 YYDVLGVSKTASPEEIKKAYRKLAVKYHPDK----NPGDAEAEKRFKEVSEAYEVLSDAQKRESYD 64          
BLAST of FC923131 vs. ExPASy Swiss-Prot
Match: DNAJ_BORPD (Chaperone protein dnaJ OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.090e-11
Identity = 35/66 (53.03%), Postives = 48/66 (72.73%), Query Frame = 3
Query:   90 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPPLLGKAKVKFQEIQEAYSVLSDERKRTLYD 287
            YY VLGV+ +++ +E+++AYRKLAM+ HPDR     P    A+ KF+EI+EAY VL DE+KR  YD
Sbjct:    6 YYEVLGVAKNATDDELKKAYRKLAMKHHPDR----NPDNKDAEEKFKEIKEAYEVLGDEQKRAAYD 67          
BLAST of FC923131 vs. ExPASy Swiss-Prot
Match: YAY1_SCHPO (Uncharacterized J domain-containing protein C4H3.01 OS=Schizosaccharomyces pombe GN=SPAC4H3.01 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.342e-11
Identity = 44/123 (35.77%), Postives = 62/123 (50.41%), Query Frame = 3
Query:   78 VQPSYYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPPLLGKAKVKFQEIQEAYSVLSDERKRTLYDAGLYDPXXXXXXGFSDFVQEMLSLMAEARKEEKSYSMEELQTMFMEMAQEFEQ 446
            V   YY +LG+S  ++  +I++AYRKLA+++HPD   K P     A  KFQ+I EAY VL DE+ R+ YD            GF+D      +L   A   E    +  ++ MF E     EQ
Sbjct:    5 VDTEYYDLLGISTDATAVDIKKAYRKLAVKYHPD---KNPDDPQGASEKFQKISEAYQVLGDEKLRSQYDQ-FGKEKAVPEQGFTDAYDFFTNLFGGAPFREWVGELSFVKEMFREEDSAVEQ 123          
BLAST of FC923131 vs. ExPASy Swiss-Prot
Match: DNJB5_MOUSE (DnaJ homolog subfamily B member 5 OS=Mus musculus GN=Dnajb5 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.342e-11
Identity = 33/66 (50.00%), Postives = 49/66 (74.24%), Query Frame = 3
Query:   90 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPPLLGKAKVKFQEIQEAYSVLSDERKRTLYD 287
            YY +LG+   ++ +EI++AYRK+A+++HPD+  K P     A+ KF+EI EAY VLSD +KR+LYD
Sbjct:    5 YYKILGIPSGANEDEIKKAYRKMALKYHPDK-NKEP----NAEEKFKEIAEAYDVLSDPKKRSLYD 65          
BLAST of FC923131 vs. ExPASy Swiss-Prot
Match: DNJB3_HUMAN (DnaJ homolog subfamily B member 3 OS=Homo sapiens GN=DNAJB3 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.342e-11
Identity = 33/66 (50.00%), Postives = 46/66 (69.70%), Query Frame = 3
Query:   90 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPPLLGKAKVKFQEIQEAYSVLSDERKRTLYD 287
            YY VL V   +S E I++AYRKLA++WHPD   K P    +A+ +F+++ EAY VLSD +KR +YD
Sbjct:    4 YYEVLDVPRQASSEAIKKAYRKLALKWHPD---KNPENKEEAERRFKQVAEAYEVLSDAKKRDIYD 66          
BLAST of FC923131 vs. ExPASy Swiss-Prot
Match: DNAJ_THEVO (Chaperone protein dnaJ OS=Thermoplasma volcanium GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.342e-11
Identity = 33/66 (50.00%), Postives = 46/66 (69.70%), Query Frame = 3
Query:   90 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPPLLGKAKVKFQEIQEAYSVLSDERKRTLYD 287
            YY +LGV  ++S E+I++A+R+LA +WHPD     P    +A+ KF+EI EAY VLSD  KR +YD
Sbjct:    5 YYKILGVDRNASEEDIKKAFRELAKKWHPD---LHPDNKAEAEEKFKEISEAYEVLSDPEKRRIYD 67          
BLAST of FC923131 vs. ExPASy Swiss-Prot
Match: DNAJ_LEGPN (Chaperone protein dnaJ OS=Legionella pneumophila GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.342e-11
Identity = 40/90 (44.44%), Postives = 56/90 (62.22%), Query Frame = 3
Query:   81 QPSYYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPPLLGKAKVKFQEIQEAYSVLSDERKRTLYD----AGLYDPXXXXXXGFSDF 338
            Q  YY +L VS ++S  EI++AYR+LAM++HPDR     P    A+ KF+EIQ+AY++LSD++KR  YD    AG+         GF  F
Sbjct:    3 QRDYYELLEVSRNASDAEIKKAYRRLAMKYHPDR----NPGDTSAEEKFKEIQKAYNILSDKQKRAAYDQFGHAGVDPSMGGGPGGFGGF 88          
BLAST of FC923131 vs. ExPASy Swiss-Prot
Match: DNAJ_LEGPL (Chaperone protein dnaJ OS=Legionella pneumophila (strain Lens) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.342e-11
Identity = 40/90 (44.44%), Postives = 56/90 (62.22%), Query Frame = 3
Query:   81 QPSYYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPPLLGKAKVKFQEIQEAYSVLSDERKRTLYD----AGLYDPXXXXXXGFSDF 338
            Q  YY +L VS ++S  EI++AYR+LAM++HPDR     P    A+ KF+EIQ+AY++LSD++KR  YD    AG+         GF  F
Sbjct:    3 QRDYYELLEVSRNASDAEIKKAYRRLAMKYHPDR----NPGDTSAEEKFKEIQKAYNILSDKQKRAAYDQFGHAGVDPSMGGGPGGFGGF 88          
BLAST of FC923131 vs. ExPASy Swiss-Prot
Match: DNAJ_LEGPH (Chaperone protein dnaJ OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.342e-11
Identity = 40/90 (44.44%), Postives = 56/90 (62.22%), Query Frame = 3
Query:   81 QPSYYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPPLLGKAKVKFQEIQEAYSVLSDERKRTLYD----AGLYDPXXXXXXGFSDF 338
            Q  YY +L VS ++S  EI++AYR+LAM++HPDR     P    A+ KF+EIQ+AY++LSD++KR  YD    AG+         GF  F
Sbjct:    3 QRDYYELLEVSRNASDAEIKKAYRRLAMKYHPDR----NPGDTSAEEKFKEIQKAYNILSDKQKRAAYDQFGHAGVDPSMGGGPGGFGGF 88          
The following BLAST results are available for this feature:
BLAST of FC923131 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
DNAJ_CHRVO4.090e-1151.52Chaperone protein dnaJ OS=Chromobacterium violaceu... [more]
DNAJ_CHLFF4.090e-1153.03Chaperone protein dnaJ OS=Chlamydophila felis (str... [more]
DNAJ_BORPD4.090e-1153.03Chaperone protein dnaJ OS=Bordetella petrii (strai... [more]
YAY1_SCHPO5.342e-1135.77Uncharacterized J domain-containing protein C4H3.0... [more]
DNJB5_MOUSE5.342e-1150.00DnaJ homolog subfamily B member 5 OS=Mus musculus ... [more]
DNJB3_HUMAN5.342e-1150.00DnaJ homolog subfamily B member 3 OS=Homo sapiens ... [more]
DNAJ_THEVO5.342e-1150.00Chaperone protein dnaJ OS=Thermoplasma volcanium G... [more]
DNAJ_LEGPN5.342e-1144.44Chaperone protein dnaJ OS=Legionella pneumophila G... [more]
DNAJ_LEGPL5.342e-1144.44Chaperone protein dnaJ OS=Legionella pneumophila (... [more]
DNAJ_LEGPH5.342e-1144.44Chaperone protein dnaJ OS=Legionella pneumophila s... [more]

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Properties
Property NameValue
Genbank descriptionC31701D09EF StrClemenN Citrus clementina cDNA clone C31701D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923131 ID=FC923131; Name=FC923131; organism=Citrus clementina; type=EST; length=736bp
GATTCATAACCGCCACGCTTTTGATGTTTGAAGCTGAACACAAATTATGA
AATATGGAGGCAGAGAGTGAAAGGAAAGTGCAGCCATCTTATTACAGCGT
TCTGGGTGTGAGTGTGCACTCTTCTGTTGAAGAAATAAGGCGCGCTTATC
GCAAGCTTGCTATGCAATGGCATCCTGATCGGTGGACAAAGACTCCACCT
TTGTTGGGTAAAGCCAAGGTTAAATTCCAGGAAATTCAAGAAGCCTATTC
TGTTTTGTCAGATGAGAGGAAGAGGACACTATATGATGCTGGGTTATATG
ACCCTGAAGAAGAAGAGGAAGAGGGATTTTCAGATTTTGTGCAAGAAATG
CTGTCTCTAATGGCTGAGGCGAGGAAAGAGGAAAAAAGCTACAGCATGGA
GGAGCTGCAAACAATGTTCATGGAAATGGCACAAGAATTTGAGCAGTCCT
CGTGGTTCTGCGGATACCCAGTTGCTGATGATTCCTGCTCCTTGGAGAGT
ACACAGTGGAATACGAATTTAATAGACAATAATAGAAACGCACAATTTGG
TGCTTTTCCAGGGTGGCAGTTCTATGGAGCAAGTGGTTTTTGCAGATAAA
AGAATCCATTTGGATTCAAGCAGTGGATGCAAGATTTGAACATGAAAACG
AGCAGTGCGCCTCTGATTTTTGCTCTGATTGTTTTTGGTGTGGAGACATC
ACATTTTGTGGGAACGTCTTTGCTCTGATGTCCTCT
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