FC923131

Overview
NameFC923131
Unique NameFC923131
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length736
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923131 vs. ExPASy Swiss-Prot
Match: DNAJ_LEGPC (Chaperone protein dnaJ OS=Legionella pneumophila (strain Corby) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.342e-11
Identity = 40/90 (44.44%), Postives = 56/90 (62.22%), Query Frame = 3
Query:   81 QPSYYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPPLLGKAKVKFQEIQEAYSVLSDERKRTLYD----AGLYDPXXXXXXGFSDF 338
            Q  YY +L VS ++S  EI++AYR+LAM++HPDR     P    A+ KF+EIQ+AY++LSD++KR  YD    AG+         GF  F
Sbjct:    3 QRDYYELLEVSRNASDAEIKKAYRRLAMKYHPDR----NPGDTSAEEKFKEIQKAYNILSDKQKRAAYDQFGHAGVDPSMGGGPGGFGGF 88          
BLAST of FC923131 vs. ExPASy Swiss-Prot
Match: DNAJ_LEGPA (Chaperone protein dnaJ OS=Legionella pneumophila (strain Paris) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.342e-11
Identity = 40/90 (44.44%), Postives = 56/90 (62.22%), Query Frame = 3
Query:   81 QPSYYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPPLLGKAKVKFQEIQEAYSVLSDERKRTLYD----AGLYDPXXXXXXGFSDF 338
            Q  YY +L VS ++S  EI++AYR+LAM++HPDR     P    A+ KF+EIQ+AY++LSD++KR  YD    AG+         GF  F
Sbjct:    3 QRDYYELLEVSRNASDAEIKKAYRRLAMKYHPDR----NPGDTSAEEKFKEIQKAYNILSDKQKRAAYDQFGHAGVDPSMGGGPGGFGGF 88          
BLAST of FC923131 vs. ExPASy Swiss-Prot
Match: DNAJ_ECOBW (Chaperone protein dnaJ OS=Escherichia coli (strain K12 / BW2952) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.342e-11
Identity = 34/70 (48.57%), Postives = 48/70 (68.57%), Query Frame = 3
Query:   78 VQPSYYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPPLLGKAKVKFQEIQEAYSVLSDERKRTLYD 287
            V+  YY +LGVS  +   EIR+AY++LAM++HPDR         +A+ KF+EI+EAY VL+D +KR  YD
Sbjct:    2 VKQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDK----EAEAKFKEIKEAYEVLTDSQKRAAYD 67          
BLAST of FC923131 vs. ExPASy Swiss-Prot
Match: DNAJ_BORA1 (Chaperone protein dnaJ OS=Bordetella avium (strain 197N) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.342e-11
Identity = 34/66 (51.52%), Postives = 48/66 (72.73%), Query Frame = 3
Query:   90 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPPLLGKAKVKFQEIQEAYSVLSDERKRTLYD 287
            YY VLGV+  ++ +E+++AYRKLAM++HPDR     P   +A+ KF+E +EAY VL DE+KR  YD
Sbjct:    6 YYEVLGVAKDAADDELKKAYRKLAMKYHPDR----NPGNKEAEEKFKEAKEAYEVLGDEQKRAAYD 67          
BLAST of FC923131 vs. ExPASy Swiss-Prot
Match: DNJA1_PONAB (DnaJ homolog subfamily A member 1 OS=Pongo abelii GN=DNAJA1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.977e-11
Identity = 34/71 (47.89%), Postives = 51/71 (71.83%), Query Frame = 3
Query:   81 QPSYYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPPLLGKAKVKFQEIQEAYSVLSDERKRTLYDAG 293
            + +YY VLGV  +++ EE+++AYRKLA+++HPD+     P  G+   KF++I +AY VLSD +KR LYD G
Sbjct:    4 ETTYYDVLGVKPNATQEELKKAYRKLALKYHPDK----NPNEGE---KFKQISQAYEVLSDAKKRELYDKG 67          
BLAST of FC923131 vs. ExPASy Swiss-Prot
Match: DNJA1_HUMAN (DnaJ homolog subfamily A member 1 OS=Homo sapiens GN=DNAJA1 PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 6.977e-11
Identity = 34/71 (47.89%), Postives = 51/71 (71.83%), Query Frame = 3
Query:   81 QPSYYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPPLLGKAKVKFQEIQEAYSVLSDERKRTLYDAG 293
            + +YY VLGV  +++ EE+++AYRKLA+++HPD+     P  G+   KF++I +AY VLSD +KR LYD G
Sbjct:    4 ETTYYDVLGVKPNATQEELKKAYRKLALKYHPDK----NPNEGE---KFKQISQAYEVLSDAKKRELYDKG 67          
BLAST of FC923131 vs. ExPASy Swiss-Prot
Match: DNJA1_BOVIN (DnaJ homolog subfamily A member 1 OS=Bos taurus GN=DNAJA1 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 6.977e-11
Identity = 34/71 (47.89%), Postives = 51/71 (71.83%), Query Frame = 3
Query:   81 QPSYYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPPLLGKAKVKFQEIQEAYSVLSDERKRTLYDAG 293
            + +YY VLGV  +++ EE+++AYRKLA+++HPD+     P  G+   KF++I +AY VLSD +KR LYD G
Sbjct:    4 ETTYYDVLGVKPNATQEELKKAYRKLALKYHPDK----NPNEGE---KFKQISQAYEVLSDAKKRELYDKG 67          
BLAST of FC923131 vs. ExPASy Swiss-Prot
Match: DNAJ_SACD2 (Chaperone protein dnaJ OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.977e-11
Identity = 34/66 (51.52%), Postives = 46/66 (69.70%), Query Frame = 3
Query:   90 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPPLLGKAKVKFQEIQEAYSVLSDERKRTLYD 287
            YY VLGVS   S +E+++AYRK+AM++HPDR +  P     ++ KF+E  EAY VLSD +KR  YD
Sbjct:    6 YYEVLGVSKDVSPQELKKAYRKVAMKYHPDRNSDDP----NSEDKFKEASEAYEVLSDAQKRAAYD 67          
BLAST of FC923131 vs. ExPASy Swiss-Prot
Match: DNAJ_RHOCS (Chaperone protein dnaJ OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.977e-11
Identity = 34/66 (51.52%), Postives = 45/66 (68.18%), Query Frame = 3
Query:   90 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPPLLGKAKVKFQEIQEAYSVLSDERKRTLYD 287
            YY VLGV   +S +++++AYRKLAMQ+HPDR          A+ KF+EI EAY VL D++KR  YD
Sbjct:    6 YYEVLGVQKGASADDLKKAYRKLAMQYHPDRNQGDK----AAEQKFKEISEAYDVLKDDQKRAAYD 67          
BLAST of FC923131 vs. ExPASy Swiss-Prot
Match: DNAJ_RALEJ (Chaperone protein dnaJ OS=Ralstonia eutropha (strain JMP134) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.977e-11
Identity = 33/66 (50.00%), Postives = 48/66 (72.73%), Query Frame = 3
Query:   90 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPPLLGKAKVKFQEIQEAYSVLSDERKRTLYD 287
            YY VLGV  ++S +EI++AYRKLAM++HPDR     P   +++ KF+E++EAY +LSD  K+  YD
Sbjct:    6 YYEVLGVGKNASDDEIKKAYRKLAMKYHPDR----NPDSKESEEKFKEVKEAYEMLSDAEKKAAYD 67          
The following BLAST results are available for this feature:
BLAST of FC923131 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
DNAJ_LEGPC5.342e-1144.44Chaperone protein dnaJ OS=Legionella pneumophila (... [more]
DNAJ_LEGPA5.342e-1144.44Chaperone protein dnaJ OS=Legionella pneumophila (... [more]
DNAJ_ECOBW5.342e-1148.57Chaperone protein dnaJ OS=Escherichia coli (strain... [more]
DNAJ_BORA15.342e-1151.52Chaperone protein dnaJ OS=Bordetella avium (strain... [more]
DNJA1_PONAB6.977e-1147.89DnaJ homolog subfamily A member 1 OS=Pongo abelii ... [more]
DNJA1_HUMAN6.977e-1147.89DnaJ homolog subfamily A member 1 OS=Homo sapiens ... [more]
DNJA1_BOVIN6.977e-1147.89DnaJ homolog subfamily A member 1 OS=Bos taurus GN... [more]
DNAJ_SACD26.977e-1151.52Chaperone protein dnaJ OS=Saccharophagus degradans... [more]
DNAJ_RHOCS6.977e-1151.52Chaperone protein dnaJ OS=Rhodospirillum centenum ... [more]
DNAJ_RALEJ6.977e-1150.00Chaperone protein dnaJ OS=Ralstonia eutropha (stra... [more]

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Properties
Property NameValue
Genbank descriptionC31701D09EF StrClemenN Citrus clementina cDNA clone C31701D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923131 ID=FC923131; Name=FC923131; organism=Citrus clementina; type=EST; length=736bp
GATTCATAACCGCCACGCTTTTGATGTTTGAAGCTGAACACAAATTATGA
AATATGGAGGCAGAGAGTGAAAGGAAAGTGCAGCCATCTTATTACAGCGT
TCTGGGTGTGAGTGTGCACTCTTCTGTTGAAGAAATAAGGCGCGCTTATC
GCAAGCTTGCTATGCAATGGCATCCTGATCGGTGGACAAAGACTCCACCT
TTGTTGGGTAAAGCCAAGGTTAAATTCCAGGAAATTCAAGAAGCCTATTC
TGTTTTGTCAGATGAGAGGAAGAGGACACTATATGATGCTGGGTTATATG
ACCCTGAAGAAGAAGAGGAAGAGGGATTTTCAGATTTTGTGCAAGAAATG
CTGTCTCTAATGGCTGAGGCGAGGAAAGAGGAAAAAAGCTACAGCATGGA
GGAGCTGCAAACAATGTTCATGGAAATGGCACAAGAATTTGAGCAGTCCT
CGTGGTTCTGCGGATACCCAGTTGCTGATGATTCCTGCTCCTTGGAGAGT
ACACAGTGGAATACGAATTTAATAGACAATAATAGAAACGCACAATTTGG
TGCTTTTCCAGGGTGGCAGTTCTATGGAGCAAGTGGTTTTTGCAGATAAA
AGAATCCATTTGGATTCAAGCAGTGGATGCAAGATTTGAACATGAAAACG
AGCAGTGCGCCTCTGATTTTTGCTCTGATTGTTTTTGGTGTGGAGACATC
ACATTTTGTGGGAACGTCTTTGCTCTGATGTCCTCT
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