FC923139
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923139 vs. ExPASy Swiss-Prot
Match: RGP1_ORYSJ (Ras-related protein RGP1 OS=Oryza sativa subsp. japonica GN=RGP1 PE=2 SV=2) HSP 1 Score: 258.455 bits (659), Expect = 2.894e-68 Identity = 127/178 (71.35%), Postives = 150/178 (84.27%), Query Frame = 3 Query: 129 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD 662 DY+FKVVLIGDS VGKS LL+RF RNEF+L+SK+TIGVEF TR++ D + VKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F++V RWL+ELR H D NIVIML+GNK+DL LR V TEDA FAEREN FFMETSALES NVENAF VLT+IYR+VS+K L ++ Sbjct: 16 DYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHIDARTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNKSDLGTLRVVPTEDAKEFAERENLFFMETSALESTNVENAFMTVLTEIYRIVSKKNLVANEE 193
BLAST of FC923139 vs. ExPASy Swiss-Prot
Match: RB11A_DICDI (Ras-related protein Rab-11A OS=Dictyostelium discoideum GN=rab11A PE=1 SV=1) HSP 1 Score: 258.07 bits (658), Expect = 3.780e-68 Identity = 124/181 (68.51%), Postives = 154/181 (85.08%), Query Frame = 3 Query: 114 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 656 + ++YDYL+K+VLIGDSGVGKSNLLSRFTRNEFSLE+KSTIGVEFATR+I+ + K +KAQ+WDTAGQERYRAITSAYYRGAVGALLVYD+ + T+++VERW+ ELR++ D NI IMLVGNK+DLRHLR VST++A F+E+ F+ETSAL+S NVE AF +LTQIY ++SR + G Sbjct: 6 SQEEYDYLYKIVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRTIQTEGKTIKAQVWDTAGQERYRAITSAYYRGAVGALLVYDIAKQATYKSVERWILELRENADRNIEIMLVGNKSDLRHLREVSTDEAKEFSEKHKLTFIETSALDSSNVELAFQNILTQIYHIMSRPSHSTG 186
BLAST of FC923139 vs. ExPASy Swiss-Prot
Match: RB11A_LOTJA (Ras-related protein Rab11A OS=Lotus japonicus GN=RAB11A PE=2 SV=1) HSP 1 Score: 250.751 bits (639), Expect = 6.035e-66 Identity = 122/178 (68.54%), Postives = 150/178 (84.27%), Query Frame = 3 Query: 114 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL 647 A+ DY+FKVVLIGDS VGKS +L+RF RNEFSL+SKSTIGVEF TR++ D K VKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ TF+++ RWL+ELR+H D NIVI+L+GNK DL + R V TEDA FAE+E FF+ETSALE+ NVE+AFT VLT+IY +V++K+L Sbjct: 10 ANAKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILIGNKCDLVNQRDVPTEDAKEFAEKEGLFFLETSALEATNVESAFTTVLTEIYNIVNKKSL 187
BLAST of FC923139 vs. ExPASy Swiss-Prot
Match: RB11D_TOBAC (Ras-related protein Rab11D OS=Nicotiana tabacum GN=RAB11D PE=2 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 6.672e-65 Identity = 125/214 (58.41%), Postives = 160/214 (74.77%), Query Frame = 3 Query: 114 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGD-----DPAALPRDRQIMWN*DDVSAVRKSMCS 740 A DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ K VKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ TF+++ RWL+ELR H D NIVIML+GNK DL RAV TEDA FA++E FF+ETSA+E+ N+E+AF VLT+I+ +V++K L D +PA+L + ++ V +K+ CS Sbjct: 8 ASQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLAIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLIGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATNLEDAFLTVLTEIFNIVNKKNLAADDNQSNGNPASLTGKKILVPGPGQVIPEKKACCS 221
BLAST of FC923139 vs. ExPASy Swiss-Prot
Match: YPT31_YEAST (GTP-binding protein YPT31/YPT8 OS=Saccharomyces cerevisiae GN=YPT31 PE=1 SV=3) HSP 1 Score: 243.817 bits (621), Expect = 7.377e-64 Identity = 115/182 (63.19%), Postives = 146/182 (80.22%), Query Frame = 3 Query: 123 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPA 668 DYD LFK+VLIGDSGVGKSNLLSRFT+NEF+++SKSTIGVEFATR++ D K +KAQIWDTAGQERYRAITSAYYRGAVGAL+VYD+++ ++EN WL ELR++ D N+ + L+GNK+DL HLRAV TE++ FA+ F ETSAL S NV+ AF E++ IY+ VS+ +++GD A Sbjct: 9 DYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIGNKSDLAHLRAVPTEESKTFAQENQLLFTETSALNSENVDKAFEELINTIYQKVSKHQMDLGDSSA 190
BLAST of FC923139 vs. ExPASy Swiss-Prot
Match: RB11C_TOBAC (Ras-related protein Rab11C OS=Nicotiana tabacum GN=RAB11C PE=2 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 8.156e-63 Identity = 122/214 (57.01%), Postives = 158/214 (73.83%), Query Frame = 3 Query: 114 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL-----EIGDDPAALPRDRQIMWN*DDVSAVRKSMCS 740 A DY+FKVVLIGDS VGK+ +L+RF RNEFSL+SK+TIGVEF TR++ K VKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ TF+++ RWL+ELR H D NIVIML GNK DL RAV TEDA FA++E FF+ETSA+E+ +E+AF VLT+I+ +V++K L + +PA+L + ++ V +K+ CS Sbjct: 8 ASQKIDYVFKVVLIGDSAVGKTQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLTGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATKLEDAFLTVLTEIFNIVNKKNLAADENQSNSNPASLTGKKILVPGPGQVIPGKKACCS 221
BLAST of FC923139 vs. ExPASy Swiss-Prot
Match: YPT32_YEAST (GTP-binding protein YPT32/YPT11 OS=Saccharomyces cerevisiae GN=YPT32 PE=1 SV=3) HSP 1 Score: 235.343 bits (599), Expect = 2.624e-61 Identity = 112/177 (63.28%), Postives = 144/177 (81.36%), Query Frame = 3 Query: 123 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 653 DYDYLFK+VLIGDSGVGKSNLLSRFT +EF++ESKSTIGVEFATR+I ++K +KAQIWDTAGQERYRAITSAYYRGAVGAL+VYD+++ ++EN WL ELR++ D N+ + L+GNK+DL HLRAV T++A FA F ETSAL S NV+ AF E++ I+++VS+ +++ Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKSDLAHLRAVPTDEAKNFAMENQMLFTETSALNSDNVDKAFRELIVAIFQMVSKHQVDL 185
BLAST of FC923139 vs. ExPASy Swiss-Prot
Match: RAB25_BOVIN (Ras-related protein Rab-25 OS=Bos taurus GN=RAB25 PE=2 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 4.475e-61 Identity = 119/194 (61.34%), Postives = 150/194 (77.32%), Query Frame = 3 Query: 111 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK--------ALEIGDDPA 668 RA++DY+++FKVVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ +KAQIWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL DH ++ IV+MLVGNK+DL R V TE+A FAE F+ETSAL+S NVE AF VL +I+ VS++ A+ +G PA Sbjct: 4 RAEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQSREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQNNARTNAVTLGSGPA 197
BLAST of FC923139 vs. ExPASy Swiss-Prot
Match: RAB25_MOUSE (Ras-related protein Rab-25 OS=Mus musculus GN=Rab25 PE=1 SV=2) HSP 1 Score: 234.187 bits (596), Expect = 5.845e-61 Identity = 116/177 (65.54%), Postives = 143/177 (80.79%), Query Frame = 3 Query: 111 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK 641 R D+DY+++FKVVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ VKAQIWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL DH ++ IV+MLVGNK+DL R V TE+A FAE F+ETSAL+S NVE AF VL +I+ VS++ Sbjct: 4 RTDEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEACMFAENNGLLFLETSALDSTNVELAFQTVLKEIFAKVSKQ 180
BLAST of FC923139 vs. ExPASy Swiss-Prot
Match: RAB25_HUMAN (Ras-related protein Rab-25 OS=Homo sapiens GN=RAB25 PE=1 SV=2) HSP 1 Score: 230.72 bits (587), Expect = 6.462e-60 Identity = 114/175 (65.14%), Postives = 142/175 (81.14%), Query Frame = 3 Query: 117 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK 641 ++DY+++FKVVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ VKAQIWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL DH ++ IV+MLVGNK+DL R V TE+A FAE F+ETSAL+S NVE AF VL +I+ VS++ Sbjct: 6 EEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180 The following BLAST results are available for this feature:
BLAST of FC923139 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC923139 ID=FC923139; Name=FC923139; organism=Citrus clementina; type=EST; length=749bpback to top |