FC923139
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923139 vs. ExPASy Swiss-Prot
Match: RAB8_DISOM (Ras-related protein Rab-8 OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 7.936e-42 Identity = 83/188 (44.15%), Postives = 124/188 (65.96%), Query Frame = 3 Query: 126 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAF----TEVLTQIYRVVSRKALEIGDDPAALP 677 YDYLFK++LIGDSGVGK+ LL RF+ + F+ STIG++F R++ D K +K QIWDTAGQER+R IT+AYYRGA+G + VYD+T +F+N++ W++ + +H S++ M++GNK D+ R VS E A F+ETSA S+NVE AF +++T++ + ++ +L+ D P Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTVELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMKVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNEKRQVSKERGEKLAIDYGIKFLETSAKSSINVEEAFITLARDIMTKLNKKMNENSLQEAVDKLKSP 192
BLAST of FC923139 vs. ExPASy Swiss-Prot
Match: YPTV1_VOLCA (GTP-binding protein yptV1 OS=Volvox carteri GN=YPTV1 PE=3 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.354e-41 Identity = 85/166 (51.20%), Postives = 115/166 (69.28%), Query Frame = 3 Query: 123 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQI 620 +YDYLFK++LIGDSGVGKS LL RF + ++ STIGV+F R++ D K++K QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F NV++WL E+ + N+ +LVGNK+DL + V + A AFA+ F+ETSA + NVE AF + +I Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLAEIDRYASENVNKLLVGNKSDLTGKKVVDYQAAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEI 169
BLAST of FC923139 vs. ExPASy Swiss-Prot
Match: YPTC1_CHLRE (GTP-binding protein YPTC1 OS=Chlamydomonas reinhardtii GN=YPTC1 PE=3 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.354e-41 Identity = 89/188 (47.34%), Postives = 122/188 (64.89%), Query Frame = 3 Query: 123 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQI-YRVVSRKALEIGDDPAALPRD 683 +YDYLFK++LIGDSGVGKS LL RF + ++ STIGV+F R++ D K++K QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F NV++WL E+ + N+ +LVGNK+DL + V A AFA+ F+ETSA + NVE AF + +I R+ S+ P P++ Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKSDLTSKKVVEYSVAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPIPTKAGGPVVRPQE 191
BLAST of FC923139 vs. ExPASy Swiss-Prot
Match: RB1BV_BETVU (Ras-related protein RAB1BV OS=Beta vulgaris GN=RAB1BV PE=2 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.354e-41 Identity = 87/171 (50.88%), Postives = 111/171 (64.91%), Query Frame = 3 Query: 111 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL-RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQI 620 RA DYDYL K++LIGDSGVGKS LL RF+ F+ +TIG++F R+I D K +K QIWDTAGQER+R IT+AYYRGA+G LLVYDVT +F N+ W++ + H N+ +LVGNKAD+ RAV T A A+ F ETSA ++NVE F + I Sbjct: 7 RARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI 177
BLAST of FC923139 vs. ExPASy Swiss-Prot
Match: RAB8A_RAT (Ras-related protein Rab-8A OS=Rattus norvegicus GN=Rab8a PE=2 SV=2) HSP 1 Score: 169.474 bits (428), Expect = 1.768e-41 Identity = 82/172 (47.67%), Postives = 116/172 (67.44%), Query Frame = 3 Query: 126 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK 641 YDYLFK++LIGDSGVGK+ +L RF+ + F+ STIG++F R+I D K +K QIWDTAGQER+R IT+AYYRGA+G +LVYD+T +F+N+ W++ + +H +++ M++GNK D+ R VS E A FMETSA ++NVENAF + I + +K Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKK 176
BLAST of FC923139 vs. ExPASy Swiss-Prot
Match: RAB8A_MOUSE (Ras-related protein Rab-8A OS=Mus musculus GN=Rab8a PE=1 SV=2) HSP 1 Score: 169.474 bits (428), Expect = 1.768e-41 Identity = 82/172 (47.67%), Postives = 116/172 (67.44%), Query Frame = 3 Query: 126 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK 641 YDYLFK++LIGDSGVGK+ +L RF+ + F+ STIG++F R+I D K +K QIWDTAGQER+R IT+AYYRGA+G +LVYD+T +F+N+ W++ + +H +++ M++GNK D+ R VS E A FMETSA ++NVENAF + I + +K Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKK 176
BLAST of FC923139 vs. ExPASy Swiss-Prot
Match: RAB8A_MACFA (Ras-related protein Rab-8A OS=Macaca fascicularis GN=RAB8A PE=2 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.768e-41 Identity = 82/172 (47.67%), Postives = 116/172 (67.44%), Query Frame = 3 Query: 126 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK 641 YDYLFK++LIGDSGVGK+ +L RF+ + F+ STIG++F R+I D K +K QIWDTAGQER+R IT+AYYRGA+G +LVYD+T +F+N+ W++ + +H +++ M++GNK D+ R VS E A FMETSA ++NVENAF + I + +K Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKK 176
BLAST of FC923139 vs. ExPASy Swiss-Prot
Match: RAB8A_HUMAN (Ras-related protein Rab-8A OS=Homo sapiens GN=RAB8A PE=1 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.768e-41 Identity = 82/172 (47.67%), Postives = 116/172 (67.44%), Query Frame = 3 Query: 126 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK 641 YDYLFK++LIGDSGVGK+ +L RF+ + F+ STIG++F R+I D K +K QIWDTAGQER+R IT+AYYRGA+G +LVYD+T +F+N+ W++ + +H +++ M++GNK D+ R VS E A FMETSA ++NVENAF + I + +K Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKK 176
BLAST of FC923139 vs. ExPASy Swiss-Prot
Match: RAB8A_CHICK (Ras-related protein Rab-8A OS=Gallus gallus GN=RAB8A PE=2 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.768e-41 Identity = 82/172 (47.67%), Postives = 113/172 (65.70%), Query Frame = 3 Query: 126 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK 641 YDYLFK++LIGDSGVGK+ L RF+ + F+ STIG++F R+I D K +K QIWDTAGQER+R IT+AYYRGA+G +LVYD+T +FEN+ W++ + +H ++ M++GNK D R VS E A FMETSA ++N+ENAF + I + +K Sbjct: 5 YDYLFKLLLIGDSGVGKTCALFRFSEDAFNATFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIRNWVRNIEEHASPDVEKMILGNKCDANDKRQVSREQGEKLAASFGIKFMETSAKANINIENAFFTLARDIKAKMDKK 176
BLAST of FC923139 vs. ExPASy Swiss-Prot
Match: RAB8A_CANFA (Ras-related protein Rab-8A OS=Canis familiaris GN=RAB8A PE=2 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.768e-41 Identity = 82/172 (47.67%), Postives = 116/172 (67.44%), Query Frame = 3 Query: 126 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK 641 YDYLFK++LIGDSGVGK+ +L RF+ + F+ STIG++F R+I D K +K QIWDTAGQER+R IT+AYYRGA+G +LVYD+T +F+N+ W++ + +H +++ M++GNK D+ R VS E A FMETSA ++NVENAF + I + +K Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKK 176 The following BLAST results are available for this feature:
BLAST of FC923139 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923139 ID=FC923139; Name=FC923139; organism=Citrus clementina; type=EST; length=749bpback to top |