FC923148

Overview
NameFC923148
Unique NameFC923148
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length679
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923148 vs. ExPASy Swiss-Prot
Match: TLPH_ORYSJ (Thaumatin-like protein OS=Oryza sativa subsp. japonica GN=Os11g0706600 PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.120e-34
Identity = 73/160 (45.62%), Postives = 89/160 (55.62%), Query Frame = 2
Query:  194 MINKCDHTVWPGILSNADSPALSTTGFPLEKGETKTLNAPASWGGCMWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKL-DGYGGQDFYDVSLVDGYNLPVLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGSVACKSACEA 670
            M+N C  +VWPG+L  A  P   + GF L  GE   L  PA W G +W R  CS DS G+ +C TGDCGG L C+G+  A PAT+ E  L        FYDVSLVDG+N PV +   GG G  C +  C  D+N  CPS L+V  D       C+SAC A
Sbjct:   33 MVNNCGESVWPGLLGTAGHPTPQSGGFHLGAGEEAALEVPAGWSGRVWPRRGCSFDSRGRGSCATGDCGGVLRCNGAAGATPATVVEMTLGTSASAMHFYDVSLVDGFNAPVSMAAVGG-GVGCGTAACGADVNVCCPSALEV-RDREGRVAGCRSACRA 190          
BLAST of FC923148 vs. ExPASy Swiss-Prot
Match: PRR3_JUNAS (Pathogenesis-related protein OS=Juniperus ashei PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 8.458e-29
Identity = 73/164 (44.51%), Postives = 96/164 (58.54%), Query Frame = 2
Query:  188 FTMINKCDHTVWPGILSNADSPALSTTGFPLEKGETKTLNAPASWGGC-MWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPVLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGSVACKSACEAFR 676
            F + N+C +TVW        +  L   G  L++G+T T+N  A       W RT C+ D++GK +C TGDCGG+L C+ SGA  PATLAE+       QD+YDVSLVDG+N+P+ + P       CT+  C  D+NA CPSELKV  DGG     C SAC  F+
Sbjct:   29 FDIKNQCGYTVW--------AAGLPGGGKRLDQGQTWTVNLAAGTASARFWGRTGCTFDASGKGSCQTGDCGGQLSCTVSGAV-PATLAEYT---QSDQDYYDVSLVDGFNIPLAINPTNA---QCTAPACKADINAVCPSELKV--DGG-----CNSACNVFK 170          
BLAST of FC923148 vs. ExPASy Swiss-Prot
Match: ZEAM_MAIZE (Zeamatin OS=Zea mays GN=Zlp PE=1 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 7.161e-28
Identity = 67/168 (39.88%), Postives = 98/168 (58.33%), Query Frame = 2
Query:  179 STTFTMINKCDHTVWPGILSNADSPALSTTGFPLEKGETKTLNAPASWGGC-MWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPVLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGSVACKSACEAFRQ 679
            +  FT++N+C  TVW   +           G  L +GE+  + APA      +WART C  D++G+ +C TGDCGG L+C+G G A P TLAE+ L  +   DF+D+SL+DG+N+P+  +P GG G +     C VD+NA CP+EL+   DG      C +AC  F++
Sbjct:   21 AAVFTVVNQCPFTVWAASVPVGG-------GRQLNRGESWRITAPAGTTAARIWARTGCKFDASGRGSCRTGDCGGVLQCTGYGRA-PNTLAEYALKQFNNLDFFDISLIDGFNVPMSFLPDGGSGCS-RGPRCAVDVNARCPAELR--QDG-----VCNNACPVFKK 172          
BLAST of FC923148 vs. ExPASy Swiss-Prot
Match: OSMO_TOBAC (Osmotin OS=Nicotiana tabacum GN=AP24 PE=1 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 4.641e-27
Identity = 66/166 (39.76%), Postives = 93/166 (56.02%), Query Frame = 2
Query:  179 STTFTMINKCDHTVWPGILSNADSPALSTTGFPLEKGETKTLNAPASWGGC-MWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPVLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGSVACKSACEAF 673
            + T  + N C +TVW      A +P     G  L++G+T  +NAP       +W RT C+ ++ G+ TC TGDCGG L+C+G G  PP TLAE+ LD + G DF+D+SLVDG+N+P+   P    G  C +  C  ++N  CP EL+V   GG     C + C  F
Sbjct:   21 AATIEVRNNCPYTVWA-----ASTPIGG--GRRLDRGQTWVINAPRGTKMARVWGRTNCNFNAAGRGTCQTGDCGGVLQCTGWGK-PPNTLAEYALDQFSGLDFWDISLVDGFNIPMTFAPTNPSGGKCHAIHCTANINGECPRELRV--PGG-----CNNPCTTF 171          
BLAST of FC923148 vs. ExPASy Swiss-Prot
Match: IAAT_MAIZE (Alpha-amylase/trypsin inhibitor OS=Zea mays PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.034e-26
Identity = 65/165 (39.39%), Postives = 96/165 (58.18%), Query Frame = 2
Query:  188 FTMINKCDHTVWPGILSNADSPALSTTGFPLEKGETKTLNAPASWGGC-MWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPVLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGSVACKSACEAFRQ 679
            FT++N+C  TVW   +           G  L +GE+  + APA      +WART C  D++G+ +C TGDCGG ++C+G G A P TLAE+ L  +   DF+D+S++DG+N+P   +P GG G +     C VD+NA CP+EL+   DG      C +AC  F++
Sbjct:    3 FTVVNQCPFTVWAASVPVGG-------GRQLNRGESWRITAPAGTTAARIWARTGCQFDASGRGSCRTGDCGGVVQCTGYGRA-PNTLAEYALKQFNNLDFFDISILDGFNVPYSFLPDGGSGCS-RGPRCAVDVNARCPAELR--QDG-----VCNNACPVFKK 151          
BLAST of FC923148 vs. ExPASy Swiss-Prot
Match: TPM1_SOLLC (Osmotin-like protein TPM-1 (Fragment) OS=Solanum lycopersicum GN=TPM-1 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.764e-26
Identity = 65/166 (39.16%), Postives = 91/166 (54.82%), Query Frame = 2
Query:  179 STTFTMINKCDHTVWPGILSNADSPALSTTGFPLEKGETKTLNAPASWGGC-MWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPVLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGSVACKSACEAF 673
            + TF + N C +TVW      A +P     G  L++G+T  +NAP       +W RT C+ D  G+ +C TGDCGG L+C+G G  PP TLAE+ LD +   DF+D+SLVDG+N+P+   P    G  C +  C  ++N  CP  L+V   GG     C + C  F
Sbjct:   13 AATFEVRNNCPYTVWA-----ASTPIGG--GRRLDRGQTWVINAPRGTKMARIWGRTNCNFDGDGRGSCQTGDCGGVLQCTGWGK-PPNTLAEYALDQFSNLDFWDISLVDGFNIPMTFAPTNPSGGKCHAIHCTANINGECPGSLRV--PGG-----CNNPCTTF 163          
BLAST of FC923148 vs. ExPASy Swiss-Prot
Match: NP24_SOLLC (Protein NP24 OS=Solanum lycopersicum PE=1 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 3.929e-26
Identity = 69/172 (40.12%), Postives = 93/172 (54.07%), Query Frame = 2
Query:  170 CVTST---TFTMINKCDHTVWPGILSNADSPALSTTGFPLEKGETKTLNAPASWGGC-MWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPVLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGSVACKSACEAF 673
            CVT T   T  + N C +TVW      A +P     G  L +G+T  +NAP       +W RT C+ ++ G+ TC TGDCGG L+C+G G  PP TLAE+ LD +   DF+D+SLVDG+N+P+   P    G  C +  C  ++N  CP  LKV   GG     C + C  F
Sbjct:   15 CVTYTYAATIEVRNNCPYTVWA-----ASTPIGG--GRRLNRGQTWVINAPRGTKMARIWGRTGCNFNAAGRGTCQTGDCGGVLQCTGWGK-PPNTLAEYALDQFSNLDFWDISLVDGFNIPMTFAPTKPSGGKCHAIHCTANINGECPRALKV--PGG-----CNNPCTTF 171          
BLAST of FC923148 vs. ExPASy Swiss-Prot
Match: OS13_SOLCO (Osmotin-like protein OSML13 OS=Solanum commersonii PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 6.702e-26
Identity = 64/166 (38.55%), Postives = 90/166 (54.22%), Query Frame = 2
Query:  179 STTFTMINKCDHTVWPGILSNADSPALSTTGFPLEKGETKTLNAPASWGGC-MWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPVLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGSVACKSACEAF 673
            + T  + N C +TVW      A +P     G  L++G+T  +NAP       +W RT C+ D  G+ +C TGDCGG L+C+G G  PP TLAE+ LD +   DF+D+SLVDG+N+P+   P    G  C +  C  ++N  CP  L+V   GG     C + C  F
Sbjct:   21 AATIEVRNNCPYTVWA-----ASTPIGG--GRRLDRGQTWVINAPRGTKMARIWGRTNCNFDGAGRGSCQTGDCGGVLQCTGWGK-PPNTLAEYALDQFSNLDFWDISLVDGFNIPMTFAPTNPSGGKCHAIHCTANINGECPGSLRV--PGG-----CNNPCTTF 171          
BLAST of FC923148 vs. ExPASy Swiss-Prot
Match: P21_SOYBN (Protein P21 OS=Glycine max PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 8.753e-26
Identity = 66/165 (40.00%), Postives = 91/165 (55.15%), Query Frame = 2
Query:  188 FTMINKCDHTVWPGILSNADSPALSTTGFPLEKGETKTLNAPASWGGC-MWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPVLVVPQGGDGPNCT-STGCVVDLNAACPSELKVMTDGGSGSVACKSACEAFR 676
            F + N+C +TVW   +           G  L  G++ +++ PA   G  +WART C+ D +G+  C TGDCGG L+C   G APP TLAE+ L+G+   DF+D+SLVDG+N+P+   P       CT    C  D+N  CPSELK  T GG     C + C  F+
Sbjct:    3 FEITNRCTYTVWAASVPVGG-------GVQLNPGQSWSVDVPAGTKGARVWARTGCNFDGSGRGGCQTGDCGGVLDCKAYG-APPNTLAEYGLNGFNNLDFFDISLVDGFNVPMDFSPTSN---GCTRGISCTADINGQCPSELK--TQGG-----CNNPCTVFK 149          
BLAST of FC923148 vs. ExPASy Swiss-Prot
Match: THM2_THADA (Thaumatin-2 OS=Thaumatococcus daniellii PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 7.410e-25
Identity = 66/167 (39.52%), Postives = 91/167 (54.49%), Query Frame = 2
Query:  179 STTFTMINKCDHTVWPGILSNADSPALSTTGFPLEKGETKTLNA-PASWGGCMWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPVLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGSVACKSACEAFR 676
            + TF ++N+C +TVW    S  D+ AL   G  L  GE+ T+N  P + GG +WART C  D +G+  C TGDCGG L+C   G  PP TLAEF L+ Y G+D+ D+S + G+N+P+   P       C    C  D+   CP++LK    G      C  AC  F+
Sbjct:   22 AATFEIVNRCSYTVWAAA-SKGDA-ALDAGGRQLNSGESWTINVEPGTKGGKIWARTDCYFDDSGRGICRTGDCGGLLQCKRFG-RPPTTLAEFSLNQY-GKDYIDISNIKGFNVPMDFSP---TTRGCRGVRCAADIVGQCPAKLKAPGGG------CNDACTVFQ 175          
The following BLAST results are available for this feature:
BLAST of FC923148 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
TLPH_ORYSJ5.120e-3445.63Thaumatin-like protein OS=Oryza sativa subsp. japo... [more]
PRR3_JUNAS8.458e-2944.51Pathogenesis-related protein OS=Juniperus ashei PE... [more]
ZEAM_MAIZE7.161e-2839.88Zeamatin OS=Zea mays GN=Zlp PE=1 SV=2[more]
OSMO_TOBAC4.641e-2739.76Osmotin OS=Nicotiana tabacum GN=AP24 PE=1 SV=2[more]
IAAT_MAIZE1.034e-2639.39Alpha-amylase/trypsin inhibitor OS=Zea mays PE=1 S... [more]
TPM1_SOLLC1.764e-2639.16Osmotin-like protein TPM-1 (Fragment) OS=Solanum l... [more]
NP24_SOLLC3.929e-2640.12Protein NP24 OS=Solanum lycopersicum PE=1 SV=2[more]
OS13_SOLCO6.702e-2638.55Osmotin-like protein OSML13 OS=Solanum commersonii... [more]
P21_SOYBN8.753e-2640.00Protein P21 OS=Glycine max PE=1 SV=1[more]
THM2_THADA7.410e-2539.52Thaumatin-2 OS=Thaumatococcus daniellii PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC31701F03EF StrClemenN Citrus clementina cDNA clone C31701F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923148 ID=FC923148; Name=FC923148; organism=Citrus clementina; type=EST; length=679bp
GACTCTGCTTCCTACCTTCTCCCTCTTCTTCATTGACCTTTTTCTCTTTT
CTTTTTTTTCTTTTTTTTTTTTTATATTTTTAACATTCAGCAGCCACCAG
CCGCCAGCTCCTCCGATGGCCGCCTCTCAACTAACACTTTTACTTTTAAT
CACTCATTTAACATTTTCCTGTGTGACATCCACCACCTTCACAATGATCA
ACAAATGCGACCACACAGTATGGCCCGGCATTCTCTCTAACGCCGACTCT
CCCGCACTCTCCACCACCGGCTTCCCCCTTGAAAAGGGAGAGACCAAGAC
CCTCAACGCACCCGCTTCGTGGGGCGGCTGCATGTGGGCCAGAACACTCT
GCTCCCAGGACTCCACCGGTAAGTTCACCTGCGTCACAGGTGATTGCGGC
GGCAAGCTGGAATGCTCCGGCAGTGGTGCTGCCCCACCCGCCACTCTTGC
TGAGTTCAAGCTCGATGGCTATGGTGGCCAAGACTTCTATGATGTCAGTT
TGGTCGACGGCTACAACCTCCCCGTGCTTGTCGTTCCTCAGGGTGGTGAC
GGACCCAATTGTACAAGCACGGGATGCGTTGTCGACTTGAACGCCGCGTG
TCCTTCGGAGCTTAAGGTTATGACCGACGGTGGCAGCGGAAGTGTTGCTT
GCAAGAGCGCGTGCGAAGCCTTTAGGCAG
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