FC923148

Overview
NameFC923148
Unique NameFC923148
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length679
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923148 vs. ExPASy Swiss-Prot
Match: OS81_SOLCO (Osmotin-like protein OSML81 OS=Solanum commersonii PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.264e-24
Identity = 64/166 (38.55%), Postives = 89/166 (53.61%), Query Frame = 2
Query:  179 STTFTMINKCDHTVWPGILSNADSPALSTTGFPLEKGETKTLNAPASWGGC-MWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPVLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGSVACKSACEAF 673
            + T  + N C +TVW      A +P     G  L KG+T  +NAP       +W RT C+ ++ G+ +C TGDCGG L+C+G G  PP TLAE+ LD +   DF+D+SLVDG+N+P+   P       C +  C  ++N  CP  LKV   GG     C + C  F
Sbjct:   21 AATIEVRNNCPYTVWA-----ASTPIGG--GRRLNKGQTWVINAPRGTKMARIWGRTGCNFNAAGRGSCQTGDCGGVLQCTGWGK-PPNTLAEYALDQFSNLDFWDISLVDGFNIPMTFAPTKPSAGKCHAIHCTANINGECPRALKV--PGG-----CNNPCTTF 171          
BLAST of FC923148 vs. ExPASy Swiss-Prot
Match: THM1_THADA (Thaumatin-1 OS=Thaumatococcus daniellii PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.156e-24
Identity = 66/165 (40.00%), Postives = 88/165 (53.33%), Query Frame = 2
Query:  185 TFTMINKCDHTVWPGILSNADSPALSTTGFPLEKGETKTLNA-PASWGGCMWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPVLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGSVACKSACEAFR 676
            TF ++N+C +TVW    S  D+ AL   G  L  GE+ T+N  P + GG +WART C  D +G   C TGDCGG L C   G  PP TLAEF L+ Y G+D+ D+S + G+N+P+   P       C    C  D+   CP++LK    G      C  AC  F+
Sbjct:    2 TFEIVNRCSYTVWAAA-SKGDA-ALDAGGRQLNSGESWTINVEPGTNGGKIWARTDCYFDDSGSGICKTGDCGGLLRCKRFG-RPPTTLAEFSLNQY-GKDYIDISNIKGFNVPMNFSP---TTRGCRGVRCAADIVGQCPAKLKAPGGG------CNDACTVFQ 153          
BLAST of FC923148 vs. ExPASy Swiss-Prot
Match: OSL3_ARATH (Osmotin-like protein OSM34 OS=Arabidopsis thaliana GN=OSM34 PE=2 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 2.816e-24
Identity = 66/171 (38.60%), Postives = 93/171 (54.39%), Query Frame = 2
Query:  167 SCVTSTTFTMINKCDHTVWPGILSNADSPALSTTGFPLEKGETKTLNAPASWGGC-MWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPVLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGSVACKSACEAFR 676
            S  T+ TF ++N+C +TVW      A SP     G  L+ G++  L+  A      +W RT C+ DS+G+  C TGDC G L+C+G G  PP TLAE+ L+ +   DFYD+SLVDG+N+P+   P      NC    C  D+N  CP+ L+    GG     C + C  F+
Sbjct:   18 STATAATFEILNQCSYTVWA-----AASPG---GGRRLDAGQSWRLDVAAGTKMARIWGRTNCNFDSSGRGRCQTGDCSGGLQCTGWG-QPPNTLAEYALNQFNNLDFYDISLVDGFNIPMEFSPTSS---NCHRILCTADINGQCPNVLR--APGG-----CNNPCTVFQ 169          
BLAST of FC923148 vs. ExPASy Swiss-Prot
Match: TLP_ACTDE (Thaumatin-like protein OS=Actinidia deliciosa GN=tlp PE=1 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 6.273e-24
Identity = 64/173 (36.99%), Postives = 89/173 (51.45%), Query Frame = 2
Query:  164 FSCVTSTTFTMINKCDHTVWPGILSNADSPALSTTGFPLEKGETKTLNAPASWGGC-MWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPVLVVPQGGDGPNCT-STGCVVDLNAACPSELKVMTDGGSGSVACKSACEAFR 676
            F+C    TF +IN C  TVW        + A+   G  L++G+   +N  A   G  +W RT C+ D  G+  C TGDC G L+C   G  PP TLAE+ L+ +   DF+D+SLVDG+N+ +   P  G    CT    C  D+N  CP+EL+    GG     C + C  F+
Sbjct:   19 FTCARGATFNIINNCPFTVW--------AAAVPGGGKRLDRGQNWIINPGAGTKGARVWPRTGCNFDGAGRGKCQTGDCNGLLQCQAFGQ-PPNTLAEYALNQFNNLDFFDISLVDGFNVAMEFSPTSG---GCTRGIKCTADINGQCPNELR--APGG-----CNNPCTVFK 172          
BLAST of FC923148 vs. ExPASy Swiss-Prot
Match: PRR1_TOBAC (Pathogenesis-related protein R major form OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.193e-24
Identity = 69/173 (39.88%), Postives = 94/173 (54.34%), Query Frame = 2
Query:  164 FSCVT-STTFTMINKCDHTVWPGILSNADSPALSTTGFPLEKGETKTLNA-PASWGGCMWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPVLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGSVACKSACEAFR 676
            F  VT + TF ++NKC +TVW      A SP     G  L+ G++ ++N  P +    +W RT C+ D +G+  C TGDC G LEC G G A P TLAEF L+    QDF D+SLVDG+N+P+   P  G    C +  C   +N  CP++LK  T GG     C + C   +
Sbjct:   19 FVAVTHAATFDIVNKCTYTVWA-----AASPG---GGRRLDSGQSWSINVNPGTVQARIWGRTNCNFDGSGRGNCETGDCNGMLECQGYGKA-PNTLAEFALN-QPNQDFVDISLVDGFNIPMEFSPTNG---GCRNLRCTAPINEQCPAQLK--TQGG-----CNNPCTVIK 171          
BLAST of FC923148 vs. ExPASy Swiss-Prot
Match: PRR2_TOBAC (Pathogenesis-related protein R minor form OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.397e-23
Identity = 68/173 (39.31%), Postives = 93/173 (53.76%), Query Frame = 2
Query:  164 FSCVT-STTFTMINKCDHTVWPGILSNADSPALSTTGFPLEKGETKTLNA-PASWGGCMWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPVLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGSVACKSACEAFR 676
            F  VT + TF ++N+C +TVW      A SP     G  L  G++ ++N  P +    +W RT C+ D +G+  C TGDC G LEC G G  PP TLAEF L+    QDF D+SLVDG+N+P+   P  G    C +  C   +N  CP++LK  T GG     C + C   +
Sbjct:   19 FVAVTHAATFDIVNQCTYTVWA-----AASPG---GGRQLNSGQSWSINVNPGTVQARIWGRTNCNFDGSGRGNCETGDCNGMLECQGYG-KPPNTLAEFALN-QPNQDFVDISLVDGFNIPMEFSPTNG---GCRNLRCTAPINEQCPAQLK--TQGG-----CNNPCTVIK 171          
BLAST of FC923148 vs. ExPASy Swiss-Prot
Match: PR1C_HORVU (Pathogenesis-related protein 1C OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.545e-22
Identity = 58/135 (42.96%), Postives = 77/135 (57.04%), Query Frame = 2
Query:  176 TSTTFTMINKCDHTVWPGILSNADSPALSTTGFPLEKGETKTLNAPA-SWGGCMWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPVLVVPQGGDGPNCTSTGC 577
            ++ TF + N C  T+WP  +           GF L  G+T ++N PA +  G +WART CS +  G  +C TGDCGG+L CS SG  PPATLAEF + G   QDFYD+S++DG+NL +      GD   C    C
Sbjct:   19 SAATFNIKNNCGSTIWPAGIPVGG-------GFELGSGQTSSINVPAGTQAGRIWARTGCSFNG-GSGSCQTGDCGGQLSCSLSGR-PPATLAEFTIGGGSTQDFYDISVIDGFNLAMDFSCSTGDALQCRDPSC 144          
BLAST of FC923148 vs. ExPASy Swiss-Prot
Match: PR1A_HORVU (Pathogenesis-related protein 1A/1B OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.545e-22
Identity = 58/135 (42.96%), Postives = 77/135 (57.04%), Query Frame = 2
Query:  176 TSTTFTMINKCDHTVWPGILSNADSPALSTTGFPLEKGETKTLNAPA-SWGGCMWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPVLVVPQGGDGPNCTSTGC 577
            ++ TF + N C  T+WP  +           GF L  G+T ++N PA +  G +WART CS +  G  +C TGDCGG+L CS SG  PPATLAEF + G   QDFYD+S++DG+NL +      GD   C    C
Sbjct:   19 SAATFNIKNNCGSTIWPAGIPVGG-------GFELGSGQTSSINVPAGTQAGRIWARTGCSFNG-GSGSCQTGDCGGQLSCSLSGQ-PPATLAEFTIGGGSTQDFYDISVIDGFNLAMDFSCSTGDALQCRDPSC 144          
BLAST of FC923148 vs. ExPASy Swiss-Prot
Match: TLP_WHEAT (Thaumatin-like protein PWIR2 OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.442e-22
Identity = 57/135 (42.22%), Postives = 77/135 (57.04%), Query Frame = 2
Query:  176 TSTTFTMINKCDHTVWPGILSNADSPALSTTGFPLEKGETKTLNAPA-SWGGCMWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPVLVVPQGGDGPNCTSTGC 577
            ++ TF + N C  T+WP  +           GF L  G+T ++N PA +  G +WART CS +  G  +C TGDCGG+L CS SG  PPATLAE+ + G   QDFYD+S++DG+NL +      GD   C    C
Sbjct:   19 SAATFNIKNNCGFTIWPAGIPVGG-------GFALGSGQTSSINVPAGTQAGRIWARTGCSFNG-GSGSCQTGDCGGQLSCSLSGR-PPATLAEYTIGGGSTQDFYDISVIDGFNLAMDFSCSTGDALQCRDPSC 144          
BLAST of FC923148 vs. ExPASy Swiss-Prot
Match: OS35_SOLCO (Osmotin-like protein OSML15 OS=Solanum commersonii PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.001e-21
Identity = 62/166 (37.35%), Postives = 85/166 (51.20%), Query Frame = 2
Query:  179 STTFTMINKCDHTVWPGILSNADSPALSTTGFPLEKGETKTLNAPASWGGC-MWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPVLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGSVACKSACEAF 673
            S  F + N C +TVW      A +P     G  LE+G++    AP       +W RT C+ D  G+  C TGDCGG LEC G G  PP TLAE+ L+ +   DF+D+S++DG+N+P+   P       C    CV ++N  CP  L+V   GG     C + C  F
Sbjct:   22 SGVFEVHNNCPYTVWA-----AATPIGG--GRRLERGQSWWFWAPPGTKMARIWGRTNCNFDGAGRGWCQTGDCGGVLECKGWGK-PPNTLAEYALNQFSNLDFWDISVIDGFNIPMSFGPTNPGPGKCHPIQCVANINGECPGSLRV--PGG-----CNNPCTTF 172          
The following BLAST results are available for this feature:
BLAST of FC923148 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
OS81_SOLCO1.264e-2438.55Osmotin-like protein OSML81 OS=Solanum commersonii... [more]
THM1_THADA2.156e-2440.00Thaumatin-1 OS=Thaumatococcus daniellii PE=1 SV=1[more]
OSL3_ARATH2.816e-2438.60Osmotin-like protein OSM34 OS=Arabidopsis thaliana... [more]
TLP_ACTDE6.273e-2436.99Thaumatin-like protein OS=Actinidia deliciosa GN=t... [more]
PRR1_TOBAC8.193e-2439.88Pathogenesis-related protein R major form OS=Nicot... [more]
PRR2_TOBAC1.397e-2339.31Pathogenesis-related protein R minor form OS=Nicot... [more]
PR1C_HORVU1.545e-2242.96Pathogenesis-related protein 1C OS=Hordeum vulgare... [more]
PR1A_HORVU1.545e-2242.96Pathogenesis-related protein 1A/1B OS=Hordeum vulg... [more]
TLP_WHEAT3.442e-2242.22Thaumatin-like protein PWIR2 OS=Triticum aestivum ... [more]
OS35_SOLCO1.001e-2137.35Osmotin-like protein OSML15 OS=Solanum commersonii... [more]

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Properties
Property NameValue
Genbank descriptionC31701F03EF StrClemenN Citrus clementina cDNA clone C31701F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923148 ID=FC923148; Name=FC923148; organism=Citrus clementina; type=EST; length=679bp
GACTCTGCTTCCTACCTTCTCCCTCTTCTTCATTGACCTTTTTCTCTTTT
CTTTTTTTTCTTTTTTTTTTTTTATATTTTTAACATTCAGCAGCCACCAG
CCGCCAGCTCCTCCGATGGCCGCCTCTCAACTAACACTTTTACTTTTAAT
CACTCATTTAACATTTTCCTGTGTGACATCCACCACCTTCACAATGATCA
ACAAATGCGACCACACAGTATGGCCCGGCATTCTCTCTAACGCCGACTCT
CCCGCACTCTCCACCACCGGCTTCCCCCTTGAAAAGGGAGAGACCAAGAC
CCTCAACGCACCCGCTTCGTGGGGCGGCTGCATGTGGGCCAGAACACTCT
GCTCCCAGGACTCCACCGGTAAGTTCACCTGCGTCACAGGTGATTGCGGC
GGCAAGCTGGAATGCTCCGGCAGTGGTGCTGCCCCACCCGCCACTCTTGC
TGAGTTCAAGCTCGATGGCTATGGTGGCCAAGACTTCTATGATGTCAGTT
TGGTCGACGGCTACAACCTCCCCGTGCTTGTCGTTCCTCAGGGTGGTGAC
GGACCCAATTGTACAAGCACGGGATGCGTTGTCGACTTGAACGCCGCGTG
TCCTTCGGAGCTTAAGGTTATGACCGACGGTGGCAGCGGAAGTGTTGCTT
GCAAGAGCGCGTGCGAAGCCTTTAGGCAG
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