FC923149

Overview
NameFC923149
Unique NameFC923149
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length746
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923149 vs. ExPASy Swiss-Prot
Match: TRPE2_HALMA (Anthranilate synthase component 1 2 OS=Haloarcula marismortui GN=trpE2 PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.988e-29
Identity = 72/186 (38.71%), Postives = 110/186 (59.14%), Query Frame = 1
Query:  112 RGDYVNNVENCLKYIKDGESYELCLTTQLRKRIGEIDSLGLYLHLREKNPAPYAAWLSFSKEDLCICCSSPERFLRLDKNDLLEAKPIKGTIARGSTPEEDEQLKLQLQYSEKDQAENLMIVDLLRNDLGRVCEPGSVHVPNLMNVESYATVHTMVSTICGKKHSNVSAVYCVRAAFPGGSMTGAP 669
            R +Y + VE   +Y+  G+ Y+  ++ + R+  G++D LG Y  LR  NP+PY   L +  +DL I  +SPE  + +   D + + PI GT  RG++P ED +L  ++    K++AE+ M+VDL RND+ RV E GSV VP  MNV  Y+ V  + ST+ G+   +  A    RA FP G+++GAP
Sbjct:  249 RDEYEDAVERAKEYVLSGDIYQGVIS-RTRELYGDVDPLGFYEALRAVNPSPYMYLLGY--DDLTIVGASPETLVSV-AGDHVVSNPIAGTCPRGNSPVEDRRLAGEMLADGKERAEHTMLVDLARNDVRRVAEAGSVRVPEFMNVLKYSHVQHIESTVTGRLAEDKDAFDAARATFPAGTLSGAP 430          
BLAST of FC923149 vs. ExPASy Swiss-Prot
Match: TRPE_CLOTM (Anthranilate synthase component 1 OS=Clostridium thermocellum GN=trpE PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.305e-28
Identity = 74/197 (37.56%), Postives = 119/197 (60.41%), Query Frame = 1
Query:   79 RNKSAFISEVSRGDYVNNVENCLKYIKDGESYELCLTTQLRKRIGEIDSLGLYLHLREKNPAPYAAWLSFSKEDLCICCSSPERFLRLDKNDLLEAKPIKGTIARGSTPEEDEQLKLQLQYSEKDQAENLMIVDLLRNDLGRVCEPGSVHVPNLMNVESYATVHTMVSTICGKKHSNVSAVYCVRAAFPGGSMTGAP 669
            +N+ A  S +S+ D+  NV    +YI+DG+ +++ L+ +L     E +   +Y  LR  NP+PY  +L F      I  SSPE  +R++ N ++E  PI GT  RG T EEDE L+ +L   EK+ AE++M+VDL RND+GRV + G+V V NLM++E Y+ V  +V+ + G+   + +    + +  P G+++GAP
Sbjct:  215 KNELAVTSNISKEDFCRNVLKAKQYIRDGDIFQVVLSQRLCVETNE-NPFNIYRALRVINPSPYMYYLKFG--GYRIIGSSPEMLVRVE-NGIVETCPIAGTRKRGRTKEEDEALEKELLSDEKEIAEHVMLVDLGRNDIGRVSKFGTVAVKNLMHIERYSHVMHVVTNVQGEIREDKTPFDALMSILPAGTLSGAP 407          
BLAST of FC923149 vs. ExPASy Swiss-Prot
Match: TRE2_SYNY3 (Anthranilate synthase component I-like protein OS=Synechocystis sp. (strain PCC 6803) GN=trpE2 PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.305e-28
Identity = 79/217 (36.41%), Postives = 127/217 (58.53%), Query Frame = 1
Query:   28 FFTRQLEEQ--NLHAPTVSRNKSAFISEVSRGDYVNNVENCLKYIKDGESYELCLTTQ-LRKRIGEIDSLGLYLHLREKNPAPYAAWLSFSKEDLCICCSSPERFLRLDKNDLLEAKPIKGTIARGSTPEEDEQLKLQLQYSEKDQAENLMIVDLLRNDLGRVCEPGSVHVPNLMNVESYATVHTMVSTICGKKHSNVSAVYCVRAAFPGGSMTGAP 669
            FF  QL ++  ++ +P V      + ++  +  Y   V    +YIK G+ ++  LT + + K   +++S  +Y HL+  NP+P+A++      D+  C  SPER ++L+ N + + +PI GT ARG    EDEQL  +L  + K+ AE++M+VDL RNDLGRVC  G+V V  L+ +E Y+ V  +VS + G    + + V  V+A FPGG++TG P
Sbjct:  191 FFQTQLADKINSVSSPQVPPLNLTYTTD--QDQYETMVNQAKQYIKAGDIFQANLTLRFIAKTEQKLNSWQVYQHLQTINPSPFASYWRSPWGDVVSC--SPERLVKLEGN-VAQTRPIAGTRARGKNLAEDEQLLQELLVNTKELAEHIMLVDLERNDLGRVCTWGTVEVDELLAIERYSHVSHLVSNVKGILQPDKTGVDLVKALFPGGTITGCP 402          
BLAST of FC923149 vs. ExPASy Swiss-Prot
Match: TRPE_BACSU (Anthranilate synthase component 1 OS=Bacillus subtilis GN=trpE PE=3 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 8.456e-28
Identity = 79/202 (39.11%), Postives = 115/202 (56.93%), Query Frame = 1
Query:   70 TVSRN--KSAFISEVSRGDYVNNVENCLKYIKDGESYELCLTTQLRKRIGEIDSLGLYLHLREKNPAPYAAWLSFSKEDLCICCSSPERFLRLDKNDLLEAKPIKGTIARGSTPEEDEQLKLQLQYSEKDQAENLMIVDLLRNDLGRVCEPGSVHVPNLMNVESYATVHTMVSTICGKKHSNVSAVYCVRAAFPGGSMTGAP 669
            TVS N  KSAF+++V         E    YIK G+ ++  L+ +    I + D+  LY  LR  NP+PY  ++     +  I  SSPER + +    L E  PI GT  RG+   EDE+LK++L   EK++AE+ M+VDL RND+GRV E GSV VP    + S++ V  ++S + G+    V  V  + +AFP G++TGAP
Sbjct:  224 TVSSNYEKSAFMADV---------EKIKSYIKAGDIFQGVLSQKFEVPI-KADAFELYRVLRIVNPSPYMYYMKLLDRE--IVGSSPERLIHVQDGHL-EIHPIAGTRKRGADKAEDERLKVELMKDEKEKAEHYMLVDLARNDIGRVAEYGSVSVPEFTKIVSFSHVMHIISVVTGRLKKGVHPVDALMSAFPAGTLTGAP 412          
BLAST of FC923149 vs. ExPASy Swiss-Prot
Match: TRPE_HALVO (Anthranilate synthase component 1 OS=Halobacterium volcanii GN=trpE PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.104e-27
Identity = 72/187 (38.50%), Postives = 109/187 (58.29%), Query Frame = 1
Query:  109 SRGDYVNNVENCLKYIKDGESYELCLTTQLRKRIGEIDSLGLYLHLREKNPAPYAAWLSFSKEDLCICCSSPERFLRLDKNDLLEAKPIKGTIARGSTPEEDEQLKLQLQYSEKDQAENLMIVDLLRNDLGRVCEPGSVHVPNLMNVESYATVHTMVSTICGKKHSNVSAVYCVRAAFPGGSMTGAP 669
            SR +Y   V    ++++DG+ Y+  ++ + RK  G++D +GLY  LRE NP+PY   L     D  +  +SPE  + + + D +   PI GT  RGS P ED +L  +L    K++AE+ M+VDL RND+ RV  PGSV V + M++  Y+ V  + ST+ G   ++  A    RA FP G++TGAP
Sbjct:  245 SREEYEAAVRKTKEHVRDGDIYQGVIS-RTRKLRGQVDPVGLYASLREVNPSPYMFLLRHG--DRRVVGASPETLVSV-RGDRVVVNPIAGTCQRGSGPVEDRRLAGELLADAKERAEHTMLVDLGRNDVRRVSTPGSVRVEDFMSIIKYSHVQHIESTVSGTLDADADAFDATRATFPAGTLTGAP 427          
BLAST of FC923149 vs. ExPASy Swiss-Prot
Match: TRPE_METTH (Anthranilate synthase component 1 OS=Methanobacterium thermoautotrophicum GN=trpE PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.442e-27
Identity = 72/187 (38.50%), Postives = 106/187 (56.68%), Query Frame = 1
Query:  109 SRGDYVNNVENCLKYIKDGESYELCLTTQLRKRIGEIDSLGLYLHLREKNPAPYAAWLSFSKEDLCICCSSPERFLRLDKNDLLEAKPIKGTIARGSTPEEDEQLKLQLQYSEKDQAENLMIVDLLRNDLGRVCEPGSVHVPNLMNVESYATVHTMVSTICGKKHSNVSAVYCVRAAFPGGSMTGAP 669
            SR  Y+  VE   + I +GE ++  L+     R+   D L LY  LR  NP+PY   L     +  I  SSPE  +R++   + E  PI GT  RG TP EDE++  +L   EK+ AE+LM+VDL RNDLGR+ E G+V VP  M +  ++ V  ++S + G+    + A+  + A FP G+++GAP
Sbjct:  185 SRRRYLGMVEEARERIAEGEIFQAVLSNATDYRLRG-DRLALYEALRRVNPSPYMYHLKLGSRE--ITGSSPEMLVRVEDKQI-ETFPIAGTRPRGKTPHEDERIAAELLSDEKELAEHLMLVDLARNDLGRISEFGTVQVPEYMTIRRFSHVQHILSHVTGRLRKGMDALDALGAVFPAGTVSGAP 367          
BLAST of FC923149 vs. ExPASy Swiss-Prot
Match: TRPE_BACPU (Anthranilate synthase component 1 OS=Bacillus pumilus GN=trpE PE=3 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 1.884e-27
Identity = 73/190 (38.42%), Postives = 109/190 (57.37%), Query Frame = 1
Query:  100 SEVSRGDYVNNVENCLKYIKDGESYELCLTTQLRKRIGEIDSLGLYLHLREKNPAPYAAWLSFSKEDLCICCSSPERFLRLDKNDLLEAKPIKGTIARGSTPEEDEQLKLQLQYSEKDQAENLMIVDLLRNDLGRVCEPGSVHVPNLMNVESYATVHTMVSTICGKKHSNVSAVYCVRAAFPGGSMTGAP 669
            S   +  ++ +VE   +YI+ G+ ++  L+ +    +  + S  LY  LR  NP+PY  ++     DL    SSPER +   KN  LE  PI GT  RG+T EED +L  +L   EK++AE+ M+VDL RND+GRV E GSV VP    V +++ V  ++S + GK   +   V  + +AFP G++TGAP
Sbjct:  225 STYEKAQFLKDVEKIKEYIRAGDIFQGVLSQRFDIPVS-VSSFELYRVLRIVNPSPYMYFMKLKDRDLV--GSSPERLIHA-KNGHLEIHPIAGTRKRGTTREEDAELARELLEDEKEKAEHYMLVDLARNDVGRVAEYGSVSVPTFTKVVNFSHVMHIISIVTGKLKRDTHPVDALMSAFPAGTLTGAP 410          
BLAST of FC923149 vs. ExPASy Swiss-Prot
Match: TRPE_THEMA (Anthranilate synthase component 1 OS=Thermotoga maritima GN=trpE PE=3 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 5.481e-27
Identity = 75/199 (37.69%), Postives = 112/199 (56.28%), Query Frame = 1
Query:   85 KSAFISE----VSRGDYVNNVENCLKYIKDGESYELCLTTQLRKRIGEIDSLGLYLHLREKNPAPYAAWLSFSKEDLCICCSSPERFLRLDKNDLLEAKPIKGTIARGSTPEEDEQLKLQLQYSEKDQAENLMIVDLLRNDLGRVCEPGSVHVPNLMNVESYATVHTMVSTICGKKHSNVSAVYCVRAAFPGGSMTGAP 669
            K+ F++E      R  +   VE   KYI +G+ +++ L+     +   +D   +Y  LR  NP+PY  +L F   D  +  SSPE   +++  D    KPI GT  RG T EED +L+ +L   EK+ AE++M+VDL RNDLGRVC+ G+V V   M +E Y+ V  +VS + G+   +  AV    A FP G+++GAP
Sbjct:  171 KNVFVTEPESNFEREQFYKVVEKAKKYIVEGDIFQVVLSQAFTFKT-TLDPFYIYRALRMINPSPYMFYLKFG--DTVVLGSSPETMAKVE-GDKATVKPIAGTRPRGRTVEEDLKLERELLNDEKEIAEHVMLVDLGRNDLGRVCKEGTVRVEKKMVIERYSHVMHIVSQVSGELKDDKDAVDVFEATFPAGTVSGAP 365          
BLAST of FC923149 vs. ExPASy Swiss-Prot
Match: TRPE_BACCA (Anthranilate synthase component 1 OS=Bacillus caldotenax GN=trpE PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.221e-26
Identity = 73/213 (34.27%), Postives = 123/213 (57.75%), Query Frame = 1
Query:   40 QLEEQNLHAPTVSRNKSAFISEVSRGD---YVNNVENCLKYIKDGESYELCLTTQLRKRIGEIDSLGLYLHLREKNPAPYAAWLSFSKEDLCICCSSPERFLRLDKNDLLEAKPIKGTIARGSTPEEDEQLKLQLQYSEKDQAENLMIVDLLRNDLGRVCEPGSVHVPNLMNVESYATVHTMVSTICGKKHSNVSAVYCVRAAFPGGSMTGAP 669
            Q E+  L A + S   ++F   VS  D   ++ +VE   +YI  G+ ++  L+ +    + +     +Y  LR  NP+PY  +  F  + + I  SSPE+ +++ +  + E  PI GT  RG +PEEDE+L  +L +  K++AE+ M+VDL RND+GRV + G+V VP L+ +  ++ V  ++S + G+   NV  +  + AAFP G+++GAP
Sbjct:  205 QAEQPLLPAESESGRTASFAKAVSNYDKKQFLRDVEAVKRYIAAGDVFQAVLSQRFCVPV-QAGGFAIYRLLRYINPSPYMFY--FQLDGVEIVGSSPEKLIQVHRRRV-EIDPIAGTRRRGRSPEEDERLADELYHDPKERAEHYMLVDLARNDIGRVAKYGTVEVPVLLQIGKFSHVMHLISKVVGELDDNVHPIDALLAAFPAGTVSGAP 413          
BLAST of FC923149 vs. ExPASy Swiss-Prot
Match: PABS_SCHPO (Putative aminodeoxychorismate synthase OS=Schizosaccharomyces pombe GN=SPBP8B7.29 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.221e-26
Identity = 72/184 (39.13%), Postives = 110/184 (59.78%), Query Frame = 1
Query:  121 YVNNVENCLKYIKDGESYELCLT-TQLRKRIGEIDSLGLYLHLREKNPAPYAAWLSFSKEDLCICCSSPERFLRLDKNDLLEAKPIKGTIARGSTPEEDEQLKLQLQYSEKDQAENLMIVDLLRNDLGRVCEPGSVHVPNLMNVESYATVHTMVSTICGKKHSNVSAVYCVRAAFPGGSMTGAP 669
            Y  +V+ C +++  G+SYE+CLT T       E+    +Y+  R  NPA +A ++  +   L +CCS PERFL+  ++D     PIKGT+ R      +E  K  L  +EKD  E  MI+DL+RNDL ++ +  SVHVP L +VE ++ V++++S I G+  S ++A   +  +FP GSMTGAP
Sbjct:  447 YCESVKACQEHLLAGDSYEMCLTDTTFVSAPPELSDFEMYMRARSLNPATFAGFVRLNHFTL-LCCS-PERFLQF-RDDRCLFSPIKGTLKREGHMSLEEARKKLL--NEKDMGELNMIIDLIRNDLHQLAKKNSVHVPELYSVEEHSNVYSLLSNIYGRIESPITAWDVLSKSFPPGSMTGAP 625          
The following BLAST results are available for this feature:
BLAST of FC923149 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 75
Match NameE-valueIdentityDescription
TRPE2_HALMA9.988e-2938.71Anthranilate synthase component 1 2 OS=Haloarcula ... [more]
TRPE_CLOTM1.305e-2837.56Anthranilate synthase component 1 OS=Clostridium t... [more]
TRE2_SYNY31.305e-2836.41Anthranilate synthase component I-like protein OS=... [more]
TRPE_BACSU8.456e-2839.11Anthranilate synthase component 1 OS=Bacillus subt... [more]
TRPE_HALVO1.104e-2738.50Anthranilate synthase component 1 OS=Halobacterium... [more]
TRPE_METTH1.442e-2738.50Anthranilate synthase component 1 OS=Methanobacter... [more]
TRPE_BACPU1.884e-2738.42Anthranilate synthase component 1 OS=Bacillus pumi... [more]
TRPE_THEMA5.481e-2737.69Anthranilate synthase component 1 OS=Thermotoga ma... [more]
TRPE_BACCA1.221e-2634.27Anthranilate synthase component 1 OS=Bacillus cald... [more]
PABS_SCHPO1.221e-2639.13Putative aminodeoxychorismate synthase OS=Schizosa... [more]

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Properties
Property NameValue
Genbank descriptionC31701F04EF StrClemenN Citrus clementina cDNA clone C31701F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923149 ID=FC923149; Name=FC923149; organism=Citrus clementina; type=EST; length=746bp
AGAACAGAAGCTTATTGGCTTAAGAGCTTCTTCACAAGGCAGTTGGAGGA
GCAGAATTTACATGCTCCAACAGTTTCTCGAAATAAATCAGCCTTTATTT
CTGAGGTATCAAGAGGGGACTACGTAAACAATGTTGAGAACTGTCTGAAA
TACATAAAAGATGGAGAAAGCTATGAGTTATGTCTTACAACCCAGCTACG
AAAAAGAATTGGGGAAATAGATTCTTTGGGGCTTTACCTTCACCTTAGAG
AAAAAAATCCAGCACCATATGCTGCCTGGCTTAGTTTTTCTAAGGAGGAT
TTATGCATTTGTTGTTCTTCTCCTGAGAGGTTTCTACGATTGGATAAGAA
TGACTTATTAGAAGCAAAACCCATCAAGGGTACCATAGCTCGTGGATCCA
CACCAGAAGAAGATGAACAGCTCAAATTGCAACTGCAGTATAGTGAAAAG
GATCAGGCTGAAAATTTGATGATAGTGGATCTTCTAAGGAATGACCTTGG
TCGTGTCTGTGAGCCGGGATCTGTACATGTCCCAAATCTCATGAATGTGG
AATCATATGCAACAGTTCACACCATGGTGAGTACAATCTGTGGGAAAAAG
CATTCAAATGTTAGTGCAGTTTATTGTGTCAGAGCAGCATTCCCAGGTGG
TTCAATGACTGGTGCACCAAGTTGAGGTCGATGGGAATTCTGAGTCTATT
GAGAGTGTTCTCGGGGTACTACTCTGGCTCATTGGGTATTCTCATA
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