FC923149

Overview
NameFC923149
Unique NameFC923149
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length746
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923149 vs. ExPASy Swiss-Prot
Match: TRPE_NEIMB (Anthranilate synthase component 1 OS=Neisseria meningitidis serogroup B GN=trpE PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.545e-21
Identity = 64/191 (33.51%), Postives = 103/191 (53.93%), Query Frame = 1
Query:   97 ISEVSRGDYVNNVENCLKYIKDGESYELCLTTQLRKRIGEIDSLGLYLHLREKNPAPYAAWLSFSKEDLCICCSSPERFLRLDKNDLLEAKPIKGTIARGSTPEEDEQLKLQLQYSEKDQAENLMIVDLLRNDLGRVCEPGSVHVPNLMNVESYATVHTMVSTICGKKHSNVSAVYCVRAAFPGGSMTGAP 669
            +SE     +   V     YI  G+  ++  + ++     +   L LY  LR  NP+PY  +  F   D  I  SSPE  +R ++ND++  +PI GT  RG TP ED   +  L    K+ AE++M++DL RND+GR+ + G V V + M +E Y+ V  +VS + G+    ++ +  + A FP G+++GAP
Sbjct:  216 VSEFGEEPFKACVNKIKDYIFAGDCMQVVPSQRMSMEFTD-SPLALYRALRTLNPSPYLFYYDFG--DFHIVGSSPEILVRRERNDVI-VRPIAGTRLRGKTPAEDLANEQDLLSDAKEIAEHVMLIDLGRNDVGRISKTGEVKVTDKMVIEKYSHVMHIVSNVEGRLKDGMTNMDILAATFPAGTLSGAP 402          
BLAST of FC923149 vs. ExPASy Swiss-Prot
Match: TRPE_HAEIN (Anthranilate synthase component 1 OS=Haemophilus influenzae GN=trpE PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.545e-21
Identity = 59/157 (37.58%), Postives = 93/157 (59.24%), Query Frame = 1
Query:  220 DSLGLYLHLREKNPAPYAAWLSFSKEDLCICCSSPERFLRL-DKNDLLEAKPIKGTIARGST------PEEDEQLKLQLQYSEKDQAENLMIVDLLRNDLGRVCEPGSVHVPNLMNVESYATVHTMVSTICGKKHSNVSAVYCVRAAFPGGSMTGAP 669
            ++L  Y  L++ NP+PY  +++   ED  +  +SPE  L+   +N  LE  PI G+  RG        PE D +L+L+L+   K+QAE+LM+VDL RND+ RVC+ G+  V  LM V+ Y+ +  +VS + GK    + A++  +A    G++TGAP
Sbjct:  276 NTLASYAQLKQNNPSPYMFYMN--DEDFILFGASPESALKYAPENRQLEIYPIAGSRPRGFDAHGNIDPELDARLELELRLDHKEQAEHLMLVDLARNDIARVCQSGTRKVAELMQVDRYSHIMHLVSRVVGKLRPELDALHAYQACMNMGTLTGAP 430          
BLAST of FC923149 vs. ExPASy Swiss-Prot
Match: TRPE_BUCAP (Anthranilate synthase component 1 OS=Buchnera aphidicola subsp. Schizaphis graminum GN=trpE PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.017e-21
Identity = 65/218 (29.82%), Postives = 116/218 (53.21%), Query Frame = 1
Query:   37 RQLEEQNLHAPTVSRNKSAFISEVSRGDYVNNVENCLKYIKDGESYELCLTTQLRKRIGEIDSLGLYLHLREKNPAPYAAWLSFSKEDLCICCSSPERFLRLD-KNDLLEAKPIKGTIARGSTPEE------DEQLKLQLQYSEKDQAENLMIVDLLRNDLGRVCEPGSVHVPNLMNVESYATVHTMVSTICGKKHSNVSAVYCVRAAFPGGSMTGAP 669
            R+L E+    P          S ++  +Y   ++   K I+ GE +++  + +        + L  Y  L++ NP+PY  ++    +D  +  +SPE  L+ D K   +E  PI GT  RG T +       D +++L+++ + K+ AE+LM+VDL RNDL R+C+PGS +V +L+ V+ Y+ V  +VS + G+    + A++   +    G++TGAP
Sbjct:  217 RKLNEKLKLIPKTKIKDINLTSNMNNFEYGTIIKKLQKLIQKGEIFQVVPSRKFYLPCP--NPLSAYQKLKKSNPSPYMFFMQ--DQDFTLFGASPESSLKYDEKTRKIELYPIAGTRPRGKTEDGNLDLDLDSRIELEMRTNHKELAEHLMLVDLARNDLARICKPGSRYVSDLVRVDRYSHVMHLVSRVIGELREGLDALHAYASCMNMGTLTGAP 430          
BLAST of FC923149 vs. ExPASy Swiss-Prot
Match: TRPE_BUCRP (Anthranilate synthase component 1 OS=Buchnera aphidicola subsp. Rhopalosiphum padi GN=trpE PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.441e-21
Identity = 66/224 (29.46%), Postives = 121/224 (54.02%), Query Frame = 1
Query:   22 KSFFTRQLEEQNLHA-PTVSRNKSAFISEVSRGDYVNNVENCLKYIKDGESYELCLTTQLRKRIGEIDSLGLYLHLREKNPAPYAAWLSFSKEDLCICCSSPERFLRLD-KNDLLEAKPIKGTIARGSTPEE------DEQLKLQLQYSEKDQAENLMIVDLLRNDLGRVCEPGSVHVPNLMNVESYATVHTMVSTICGKKHSNVSAVYCVRAAFPGGSMTGAP 669
            +S   +Q   Q L++ P +        S ++  +Y + ++   K I+ GE +++  + +        + L  Y  L++ NP+PY  ++    +D  +  +SPE  L+ D K   +E  PI GT  RG T +       D +++L+++ + K+ AE+LM+VDL RNDL R+C+PGS +V +L+ V+ Y+ V  +VS + G+    + A++   +    G++TGAP
Sbjct:  210 RSVEIKQKLNQKLNSIPKIKIKDINLTSNMNNFEYGSIIKKLQKLIQKGEIFQVVPSRKFYLPCP--NPLSAYQKLKKSNPSPYMFFMQ--DQDFTLFGASPESSLKYDEKTRKIELYPIAGTRPRGRTKDGNLDLDLDSRIELEMRTNHKELAEHLMLVDLARNDLARICKPGSRYVSDLVRVDRYSHVMHLVSRVIGELREGLDALHAYASCMNMGTLTGAP 429          
BLAST of FC923149 vs. ExPASy Swiss-Prot
Match: TRPE_ACICA (Anthranilate synthase component 1 OS=Acinetobacter calcoaceticus GN=trpE PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.441e-21
Identity = 66/196 (33.67%), Postives = 107/196 (54.59%), Query Frame = 1
Query:   94 FISEVSRGDYVNNVENCLKYIKDGESYELCLTTQLRKRIGEIDSLGLYLHLREKNPAPYAAWLS----FSKEDLCICCSSPERFLRLDKNDLLEAKPIKGTIARGSTPEEDEQLKLQLQYSEKDQAENLMIVDLLRNDLGRVCEPGSVHVPNLMNVESYATVHTMVSTICGKKHSNVSAVYCVRAAFPGGSMTGAP 669
            F S   +  ++ +VE   +YI+ G+  ++    ++     + D L +Y  LR  NP+PY   +            I  SSPE   RL+ + +   +P+ GT  RG T EED  L+ +L   EK+ AE+LM++DL RND+GRV + G V V + M +E Y+ V  +VS + G+   ++ A+   +A FP G+++GAP
Sbjct:  215 FESLTGKEKFLESVETVKEYIRAGDVMQVVPGHRMVSDF-DGDPLQVYRALRHLNPSPYLFLVQGHTLTDNTPFHIVGSSPEILSRLE-DGIATVRPLAGTRPRGKTKEEDLALEQELLADEKEIAEHLMLIDLGRNDVGRVSKIGKVQVTDRMVIERYSHVMHIVSNVQGEVRDDIDALDVFKATFPAGTLSGAP 408          
BLAST of FC923149 vs. ExPASy Swiss-Prot
Match: TRPE_NEIGO (Anthranilate synthase component 1 OS=Neisseria gonorrhoeae GN=trpE PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.494e-21
Identity = 64/191 (33.51%), Postives = 104/191 (54.45%), Query Frame = 1
Query:   97 ISEVSRGDYVNNVENCLKYIKDGESYELCLTTQLRKRIGEIDSLGLYLHLREKNPAPYAAWLSFSKEDLCICCSSPERFLRLDKNDLLEAKPIKGTIARGSTPEEDEQLKLQLQYSEKDQAENLMIVDLLRNDLGRVCEPGSVHVPNLMNVESYATVHTMVSTICGKKHSNVSAVYCVRAAFPGGSMTGAP 669
            +SE     +   V+    YI  G+  ++  + ++     + + L LY  LR  NP+PY  +  F   D  I  SSPE  +R +++D++  +PI GT  RG TP ED   +  L    K+ AE++M++DL RND+GR+ + G V V + M +E Y+ V  +VS + G     V+ +  + A FP G+++GAP
Sbjct:  216 VSEFGEEPFKACVDKIKDYIFAGDCMQVVPSQRMSMEFTD-NPLALYRALRTLNPSPYLFYYDFG--DFHIVGSSPEILVRRERDDVI-VRPIAGTRLRGKTPAEDLANEQDLLSDAKEIAEHVMLIDLGRNDVGRISKTGEVKVTDKMVIEKYSHVMHIVSNVEGCLKEGVTNMDILAATFPAGTLSGAP 402          
BLAST of FC923149 vs. ExPASy Swiss-Prot
Match: TRPE_NEIG1 (Anthranilate synthase component 1 OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=trpE PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.494e-21
Identity = 64/191 (33.51%), Postives = 104/191 (54.45%), Query Frame = 1
Query:   97 ISEVSRGDYVNNVENCLKYIKDGESYELCLTTQLRKRIGEIDSLGLYLHLREKNPAPYAAWLSFSKEDLCICCSSPERFLRLDKNDLLEAKPIKGTIARGSTPEEDEQLKLQLQYSEKDQAENLMIVDLLRNDLGRVCEPGSVHVPNLMNVESYATVHTMVSTICGKKHSNVSAVYCVRAAFPGGSMTGAP 669
            +SE     +   V+    YI  G+  ++  + ++     + + L LY  LR  NP+PY  +  F   D  I  SSPE  +R +++D++  +PI GT  RG TP ED   +  L    K+ AE++M++DL RND+GR+ + G V V + M +E Y+ V  +VS + G     V+ +  + A FP G+++GAP
Sbjct:  216 VSEFGEEPFKACVDKIKDYIFAGDCMQVVPSQRMSMEFTD-NPLALYRALRTLNPSPYLFYYDFG--DFHIVGSSPEILVRRERDDVI-VRPIAGTRLRGKTPAEDLANEQDLLSDAKEIAEHVMLIDLGRNDVGRISKTGEVKVTDKMVIEKYSHVMHIVSNVEGCLKEGVTNMDILAATFPAGTLSGAP 402          
BLAST of FC923149 vs. ExPASy Swiss-Prot
Match: TRPE_NEIMA (Anthranilate synthase component 1 OS=Neisseria meningitidis serogroup A GN=trpE PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.869e-21
Identity = 63/191 (32.98%), Postives = 103/191 (53.93%), Query Frame = 1
Query:   97 ISEVSRGDYVNNVENCLKYIKDGESYELCLTTQLRKRIGEIDSLGLYLHLREKNPAPYAAWLSFSKEDLCICCSSPERFLRLDKNDLLEAKPIKGTIARGSTPEEDEQLKLQLQYSEKDQAENLMIVDLLRNDLGRVCEPGSVHVPNLMNVESYATVHTMVSTICGKKHSNVSAVYCVRAAFPGGSMTGAP 669
            +SE     +   V     YI  G+  ++  + ++     +   L LY  LR  NP+PY  +  F   D  I  SSPE  +R +++D++  +PI GT  RG TP ED   +  L    K+ AE++M++DL RND+GR+ + G V V + M +E Y+ V  +VS + G+    ++ +  + A FP G+++GAP
Sbjct:  216 VSEFGEEPFKACVNKIKDYIFAGDCMQVVPSQRMSMEFTD-SPLALYRALRTLNPSPYLFYYDFG--DFHIVGSSPEILVRRERDDVI-VRPIAGTRLRGKTPAEDLANEQDLLSDAKEIAEHVMLIDLGRNDVGRISKTGEVKVTDKMVIEKYSHVMHIVSNVEGRLKDGMTNMDILAATFPAGTLSGAP 402          
BLAST of FC923149 vs. ExPASy Swiss-Prot
Match: TRPE_BUCBP (Anthranilate synthase component 1 OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=trpE PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.666e-21
Identity = 61/191 (31.94%), Postives = 108/191 (56.54%), Query Frame = 1
Query:  118 DYVNNVENCLKYIKDGESYELCLTTQLRKRIGEIDSLGLYLHLREKNPAPYAAWLSFSKEDLCICCSSPERFLRLDKNDL-LEAKPIKGTIARGSTPEE------DEQLKLQLQYSEKDQAENLMIVDLLRNDLGRVCEPGSVHVPNLMNVESYATVHTMVSTICGKKHSNVSAVYCVRAAFPGGSMTGAP 669
            +Y   + N  K+I  GE +++  + +    +  ++ L  Y  L++ NP+PY  ++   K    +  +SPE  L+ D N   +E  PI GT  RG   +       D +++L+++ + K+ AE+LM+VDL RNDL ++CEPG+ HV +L+ V+ Y+ V  +VS + GK   ++  ++  +A    G++TGAP
Sbjct:  245 EYNKIIVNVKKFILQGEIFQVVPSRKFY--LSCVNPLSSYEVLKKNNPSPYMFFMQDRK--FTLFGASPESALKYDINSRQIEIYPIAGTRPRGRRSDGSLDLDLDNRIELEMRTNNKELAEHLMLVDLARNDLAKICEPGTRHVADLIRVDRYSHVMHLVSRVIGKLRFDLDFLHAYQACMNMGTLTGAP 431          
BLAST of FC923149 vs. ExPASy Swiss-Prot
Match: TRPE_RHOS4 (Anthranilate synthase component 1 OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=trpE PE=3 SV=3)

HSP 1 Score: 99.3673 bits (246), Expect = 2.230e-20
Identity = 62/190 (32.63%), Postives = 103/190 (54.21%), Query Frame = 1
Query:  100 SEVSRGDYVNNVENCLKYIKDGESYELCLTTQLRKRIGEIDSLGLYLHLREKNPAPYAAWLSFSKEDLCICCSSPERFLRLDKNDLLEAKPIKGTIARGSTPEEDEQLKLQLQYSEKDQAENLMIVDLLRNDLGRVCEPGSVHVPNLMNVESYATVHTMVSTICGKKHSNVSAVYCVRAAFPGGSMTGAP 669
            S  +   Y   VE    YI+ G+ +++ + +Q   +   +    LY  LR+ NP+P+  + +F      +  +SPE  +RL   ++   +PI GT  RG+TPEED  L+  L   +K+ AE+LM++DL RND+GRV + G+V       +E Y+ V  +VS + G+      A+  + A  P G+++GAP
Sbjct:  222 SNFTHEGYKAAVEKAKDYIRAGDIFQV-VPSQRWAQDFRLPPFALYRSLRKTNPSPFMFFFNFG--GFQVVGASPEILVRLRDREVT-VRPIAGTRKRGATPEEDRALEADLLSDKKELAEHLMLLDLGRNDVGRVAKIGTVRPTEKFIIERYSHVMHIVSNVVGEIAEGEDALSALLAGLPAGTVSGAP 407          
The following BLAST results are available for this feature:
BLAST of FC923149 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 75
Match NameE-valueIdentityDescription
TRPE_NEIMB1.545e-2133.51Anthranilate synthase component 1 OS=Neisseria men... [more]
TRPE_HAEIN1.545e-2137.58Anthranilate synthase component 1 OS=Haemophilus i... [more]
TRPE_BUCAP2.017e-2129.82Anthranilate synthase component 1 OS=Buchnera aphi... [more]
TRPE_BUCRP3.441e-2129.46Anthranilate synthase component 1 OS=Buchnera aphi... [more]
TRPE_ACICA3.441e-2133.67Anthranilate synthase component 1 OS=Acinetobacter... [more]
TRPE_NEIGO4.494e-2133.51Anthranilate synthase component 1 OS=Neisseria gon... [more]
TRPE_NEIG14.494e-2133.51Anthranilate synthase component 1 OS=Neisseria gon... [more]
TRPE_NEIMA5.869e-2132.98Anthranilate synthase component 1 OS=Neisseria men... [more]
TRPE_BUCBP7.666e-2131.94Anthranilate synthase component 1 OS=Buchnera aphi... [more]
TRPE_RHOS42.230e-2032.63Anthranilate synthase component 1 OS=Rhodobacter s... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31701F04EF StrClemenN Citrus clementina cDNA clone C31701F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923149 ID=FC923149; Name=FC923149; organism=Citrus clementina; type=EST; length=746bp
AGAACAGAAGCTTATTGGCTTAAGAGCTTCTTCACAAGGCAGTTGGAGGA
GCAGAATTTACATGCTCCAACAGTTTCTCGAAATAAATCAGCCTTTATTT
CTGAGGTATCAAGAGGGGACTACGTAAACAATGTTGAGAACTGTCTGAAA
TACATAAAAGATGGAGAAAGCTATGAGTTATGTCTTACAACCCAGCTACG
AAAAAGAATTGGGGAAATAGATTCTTTGGGGCTTTACCTTCACCTTAGAG
AAAAAAATCCAGCACCATATGCTGCCTGGCTTAGTTTTTCTAAGGAGGAT
TTATGCATTTGTTGTTCTTCTCCTGAGAGGTTTCTACGATTGGATAAGAA
TGACTTATTAGAAGCAAAACCCATCAAGGGTACCATAGCTCGTGGATCCA
CACCAGAAGAAGATGAACAGCTCAAATTGCAACTGCAGTATAGTGAAAAG
GATCAGGCTGAAAATTTGATGATAGTGGATCTTCTAAGGAATGACCTTGG
TCGTGTCTGTGAGCCGGGATCTGTACATGTCCCAAATCTCATGAATGTGG
AATCATATGCAACAGTTCACACCATGGTGAGTACAATCTGTGGGAAAAAG
CATTCAAATGTTAGTGCAGTTTATTGTGTCAGAGCAGCATTCCCAGGTGG
TTCAATGACTGGTGCACCAAGTTGAGGTCGATGGGAATTCTGAGTCTATT
GAGAGTGTTCTCGGGGTACTACTCTGGCTCATTGGGTATTCTCATA
back to top