FC923149

Overview
NameFC923149
Unique NameFC923149
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length746
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923149 vs. ExPASy Swiss-Prot
Match: PHNA_PSEAE (Anthranilate synthase component 1 OS=Pseudomonas aeruginosa GN=phnA PE=4 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 2.466e-19
Identity = 61/214 (28.50%), Postives = 104/214 (48.60%), Query Frame = 1
Query:   49 EQNLHAPTVSRNKSAFISEVSRGDYVNNVENCLKYIKDGESYELCLTTQLRKRIGEIDSLGLYLHLREKNPAPYAAWLSFSKEDLCICCSSPERFLRLDKNDL-LEAKPIKGTIARGSTP------EEDEQLKLQLQYSEKDQAENLMIVDLLRNDLGRVCEPGSVHVPNLMNVESYATVHTMVSTICGKKHSNVSAVYCVRAAFPGGSMTGAP 669
            E+   +P        +  ++    +   VE    +++ G+ +++  +          D    Y  L  +NP+PY  +L     D C+  +SPE  L+ D     +E  PI GT  RG         E D +L+ +L+   K+ AE++M+VDL RNDL RVC  G+  V +++ V+ Y+ V  +VS + G+ H  + A++  RA    G++ GAP
Sbjct:  224 EEASESPVAGVRAGNYQVDLDDASFARQVERLQAHVRAGDVFQIVPSRSFSMPCA--DPWRAYRQLCLRNPSPYRFFLDAG--DFCLFGASPESALKYDAESREVELYPIAGTRPRGRDARGAIDAELDNRLEAELRLDAKEIAEHMMLVDLARNDLARVCRSGTRQVRDMLKVDRYSHVMHLVSRVAGELHGELDALHAYRACLNMGTLVGAP 433          
BLAST of FC923149 vs. ExPASy Swiss-Prot
Match: TRPE_BUCDN (Anthranilate synthase component 1 OS=Buchnera aphidicola subsp. Diuraphis noxia GN=trpE PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.206e-19
Identity = 61/201 (30.35%), Postives = 106/201 (52.74%), Query Frame = 1
Query:   88 SAFISEVSRGDYVNNVENCLKYIKDGESYELCLTTQLRKRIGEIDSLGLYLHLREKNPAPYAAWLSFSKEDLCICCSSPERFLRLDKNDL-LEAKPIKGTIARGSTPEE------DEQLKLQLQYSEKDQAENLMIVDLLRNDLGRVCEPGSVHVPNLMNVESYATVHTMVSTICGKKHSNVSAVYCVRAAFPGGSMTGAP 669
            S   + +S   Y + ++     I+ GE +++  + +        + L  Y  L++ NP+PY  ++    +D  +  +SPE  L+ D     +E  PI GT  RG   +       D +++L+++ + K+ AE+LM+VDL RNDL R+CEPGS +V +L+ V+ Y  V  +VS + G     + A++   A    G++TGAP
Sbjct:  236 SMLTANMSDEQYCSIIKKLQILIRKGEIFQVVPSRKFFLPCS--NPLSAYQKLKKSNPSPYMFFMQ--DKDFTLFGASPESSLKYDDTTRQVELYPIAGTRPRGRNMDGTLNLDLDSRIELEMRTNHKELAEHLMLVDLARNDLARICEPGSRYVSDLVRVDKYPHVMHLVSRVVGTLKPELDALHAYAACMNMGTLTGAP 432          
BLAST of FC923149 vs. ExPASy Swiss-Prot
Match: TRPE_VIBCH (Anthranilate synthase component 1 OS=Vibrio cholerae GN=trpE PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 9.371e-19
Identity = 56/197 (28.43%), Postives = 109/197 (55.33%), Query Frame = 1
Query:  100 SEVSRGDYVNNVENCLKYIKDGESYELCLTTQLRKRIGEIDSLGLYLHLREKNPAPYAAWLSFSKEDLCICCSSPERFLRLDKN-DLLEAKPIKGTIARGSTPEE------DEQLKLQLQYSEKDQAENLMIVDLLRNDLGRVCEPGSVHVPNLMNVESYATVHTMVSTICGKKHSNVSAVYCVRAAFPGGSMTGAP 669
            + +S   + + V +  +Y+  G+ +++      R R+     L  Y  L++ NP+PY  ++    E   +  +SPE  L+ + + + +E  PI GT  RG   +       D +++L+L+  +K+ AE++M+VDL RND+ R+ + G+ HV +L+ V+ Y+ V  +VS + G+   ++ A++  +A    G++TGAP
Sbjct:  243 TNISDAAFCDIVRDLKQYVVKGDVFQV--VPSRRFRLPCPSPLAAYQRLKQSNPSPYMFYMQ--DERFTLFGASPESALKYEMHTNQVEIYPIAGTRRRGKRADGSIDFDLDSRIELELRTDKKENAEHMMLVDLARNDVARISQAGTRHVADLLQVDRYSHVMHLVSRVVGQLREDLDALHAYQACMNMGTLTGAP 435          
BLAST of FC923149 vs. ExPASy Swiss-Prot
Match: TRPE_SERMA (Anthranilate synthase component 1 OS=Serratia marcescens GN=trpE PE=1 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.598e-18
Identity = 53/155 (34.19%), Postives = 90/155 (58.06%), Query Frame = 1
Query:  226 LGLYLHLREKNPAPYAAWLSFSKEDLCICCSSPERFLRLDK-NDLLEAKPIKGTIARGSTPEE------DEQLKLQLQYSEKDQAENLMIVDLLRNDLGRVCEPGSVHVPNLMNVESYATVHTMVSTICGKKHSNVSAVYCVRAAFPGGSMTGAP 669
            LG Y  L++ NP+PY  ++    +D  +  +SPE  L+ D  N  +E  PI GT  RG   +       D +++L+++   K+ AE+LM+VDL RNDL R+C+ GS +V +L  V+ Y+ V  +VS + G   +++  ++  +A    G+++GAP
Sbjct:  277 LGPYQTLKDNNPSPYMFFMQ--DDDFTLFGASPESALKYDAGNRQIEIYPIAGTRPRGRRADGSLDLDLDSRIELEMRTDHKELAEHLMLVDLARNDLARICQAGSRYVADLTKVDRYSFVMHLVSRVVGTLRADLDVLHAYQACMNMGTLSGAP 429          
BLAST of FC923149 vs. ExPASy Swiss-Prot
Match: TRPE_VIBPA (Anthranilate synthase component 1 OS=Vibrio parahaemolyticus GN=trpE PE=3 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 2.088e-18
Identity = 51/155 (32.90%), Postives = 92/155 (59.35%), Query Frame = 1
Query:  226 LGLYLHLREKNPAPYAAWLSFSKEDLCICCSSPERFLRLDKN-DLLEAKPIKGTIARGSTP------EEDEQLKLQLQYSEKDQAENLMIVDLLRNDLGRVCEPGSVHVPNLMNVESYATVHTMVSTICGKKHSNVSAVYCVRAAFPGGSMTGAP 669
            L  Y  L++ NP+PY  ++    E   +  +SPE  L+ + + + +E  PI GT  RG  P      + D +++L+L+  +K+ AE++M+VDL RND+ R+ + G+ HV +L+ V+ Y+ V  +VS + G+   ++ A++  +A    G++TGAP
Sbjct:  298 LAAYKELKQSNPSPYMFYMQ--DELFTLFGASPESALKYETDTNQIEIYPIAGTRRRGKRPNGEIDFDLDSRIELELRSDKKENAEHMMLVDLARNDVARISQAGTRHVADLLKVDRYSHVMHLVSRVVGQLRDDLDALHAYQACMNMGTLTGAP 450          
BLAST of FC923149 vs. ExPASy Swiss-Prot
Match: TRPE_ECOLI (Anthranilate synthase component 1 OS=Escherichia coli (strain K12) GN=trpE PE=1 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 2.088e-18
Identity = 53/155 (34.19%), Postives = 88/155 (56.77%), Query Frame = 1
Query:  226 LGLYLHLREKNPAPYAAWLSFSKEDLCICCSSPERFLRLDKNDL-LEAKPIKGTIARGSTPEE------DEQLKLQLQYSEKDQAENLMIVDLLRNDLGRVCEPGSVHVPNLMNVESYATVHTMVSTICGKKHSNVSAVYCVRAAFPGGSMTGAP 669
            L  Y  L++ NP+PY  ++     D  +  +SPE  L+ D     +E  PI GT  RG   +       D +++L+++   K+ +E+LM+VDL RNDL R+C PGS +V +L  V+ Y+ V  +VS + G+   ++ A++  RA    G+++GAP
Sbjct:  278 LAAYYVLKKSNPSPYMFFMQ--DNDFTLFGASPESSLKYDATSRQIEIYPIAGTRPRGRRADGSLDRDLDSRIELEMRTDHKELSEHLMLVDLARNDLARICTPGSRYVADLTKVDRYSYVMHLVSRVVGELRHDLDALHAYRACMNMGTLSGAP 430          
BLAST of FC923149 vs. ExPASy Swiss-Prot
Match: TRPE_SALTY (Anthranilate synthase component 1 OS=Salmonella typhimurium GN=trpE PE=1 SV=3)

HSP 1 Score: 91.6633 bits (226), Expect = 4.651e-18
Identity = 53/155 (34.19%), Postives = 88/155 (56.77%), Query Frame = 1
Query:  226 LGLYLHLREKNPAPYAAWLSFSKEDLCICCSSPERFLRLDK-NDLLEAKPIKGTIARGSTPEE------DEQLKLQLQYSEKDQAENLMIVDLLRNDLGRVCEPGSVHVPNLMNVESYATVHTMVSTICGKKHSNVSAVYCVRAAFPGGSMTGAP 669
            L  Y  L++ NP+PY  ++     D  +  +SPE  L+ D  +  +E  PI GT  RG   +       D +++L ++   K+ +E+LM+VDL RNDL R+C PGS +V +L  V+ Y+ V  +VS + G+   ++ A++  RA    G+++GAP
Sbjct:  278 LAAYYVLKKSNPSPYMFFMQ--DNDFTLFGASPESSLKYDAASRQIEIYPIAGTRPRGRRADGTLDRDLDSRIELDMRTDHKELSEHLMLVDLARNDLARICTPGSRYVADLTKVDRYSYVMHLVSRVVGELRHDLDALHAYRACMNMGTLSGAP 430          
BLAST of FC923149 vs. ExPASy Swiss-Prot
Match: TRPE_LEPBI (Anthranilate synthase component 1 OS=Leptospira biflexa GN=trpE PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.767e-17
Identity = 67/214 (31.31%), Postives = 115/214 (53.74%), Query Frame = 1
Query:   40 QLEEQNLHAP--TVSRNKSAFISEVSRGDYVNNVENCLKYIKDGESYELCLTTQLRKRIGEIDS--LGLYLHLREKNPAPYAAWLSFSKEDLCICCSSPERFLRLDKNDLLEAKPIKGTIARGSTPEEDEQLKLQLQYSEKDQAENLMIVDLLRNDLGRVCEPGSVHVPNLMNVESYATVHTMVSTICGKKHSNVSAVYCVRAAFPGGSMTGAP 669
            QL+++N   P  TVS  K+    EV +      VE  L+ +K G +++  +  +    I ++D   L +Y  LRE NP+P+  +++   E + I  +SP    RL + ++ E+ P+ GT  RG   +ED  L  +L    K+ AE+ M++DL RND+GRV + G+V V    +V+ ++ V  + S + G   S       + ++FP G+++GAP
Sbjct:  171 QLKKENSQKPKATVSLVKAGLSKEVHK----QMVEEALEEVKAGNTFQCQIGFE---EIYQVDGNPLAIYETLREINPSPHMYYVNL--ELVTILGASPSSLFRLRQGEM-ESFPLAGTTKRGVDAKEDTLLARKLLTDPKEIAEHNMLIDLHRNDVGRVAKFGTVKVRRRFDVKRFSHVQHISSEVVGILSSKEDMFSGLASSFPRGTLSGAP 374          
BLAST of FC923149 vs. ExPASy Swiss-Prot
Match: TRPE_AZOBR (Anthranilate synthase OS=Azospirillum brasilense GN=trpE(G) PE=4 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.308e-17
Identity = 62/190 (32.63%), Postives = 95/190 (50.00%), Query Frame = 1
Query:  115 GDYVNNVENCLKYIKDGESYELCLTTQLRKRIGEIDSLGLYLHLREKNPAPYAAWLSFSKEDLCICCSSPERFLRLDKNDLLEAKPIKGTIARGSTPEEDEQLKLQLQYSEKDQAENLMIVDLLRNDLGRVCEPGSVHVPNLMNVESYATVHTMVSTICGKKHSNVSAVYCVRAAFPGGSMTGAPS*GRW 684
            GDY   VE+     + G+ +E+       +   +  S  ++  LR  NPAPY A+++  + +  +  +SPE ++R+     +E  PI GT+ARG+    D    L+L  S KD AE  M  D+ RND  RVCEPGSV V     +E Y+ +   V  + G+  S + A+          ++TGAP   RW
Sbjct:  250 GDYQRVVESAKAAFRRGDLFEVVPGQTFAEPCADAPS-SVFRRLRAANPAPYEAFVNLGRGEFLVA-ASPEMYVRV-AGGRVETCPISGTVARGADALGDAAQVLRLLTSAKDAAELTMCTDVDRNDKARVCEPGSVRVIGRRMIELYSRLIHTVDHVEGRLRSGMDALDAFLTHSWAVTVTGAPK--RW 434          
BLAST of FC923149 vs. ExPASy Swiss-Prot
Match: TRPE_BUCSC (Anthranilate synthase component 1 OS=Buchnera aphidicola subsp. Schlechtendalia chinensis GN=trpE PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 8.771e-17
Identity = 64/215 (29.77%), Postives = 117/215 (54.42%), Query Frame = 1
Query:   52 QNLHAPTVSRNKSAFISEVSRGD--YVNNVENCLKYIKDGESYELCLTTQLRKRIGEIDSLGLYLHLREKNPAPYAAWLSFSKEDLCICCSSPERFLRLDK-NDLLEAKPIKGTIAR-----GSTPEE-DEQLKLQLQYSEKDQAENLMIVDLLRNDLGRVCEPGSVHVPNLMNVESYATVHTMVSTICGKKHSNVSAVYCVRAAFPGGSMTGAP 669
            QN + P  S +    I + +R D  Y   ++   K I  GE +++  + +    +   +SL  Y  L++ NP+PY  ++  S  +  +  +SPE  L+ D  +  +E  PI GT  R     GS   + D +++L+++ + K+ +E+LM+VDL RNDL ++C+PG+ +V +L  V+ Y+ V  +VS + GK   ++   +  +A    G+++GAP
Sbjct:  220 QNFY-PLESTSLKKMILKCNRTDREYEKIIKEMKKSIMIGEIFQVVPSRKFY--LPCTNSLAAYDVLKKNNPSPYMFFMQDS--NFTLFGASPESSLKYDTLSRKIEIYPIAGTRPRARKIDGSIDLDLDSRIELEMRTNHKELSEHLMLVDLARNDLAKICDPGTRYVADLTQVDKYSHVMHLVSRVVGKLRLDLDVFHAYQACMNMGTLSGAP 429          
The following BLAST results are available for this feature:
BLAST of FC923149 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 75
Match NameE-valueIdentityDescription
PHNA_PSEAE2.466e-1928.50Anthranilate synthase component 1 OS=Pseudomonas a... [more]
TRPE_BUCDN4.206e-1930.35Anthranilate synthase component 1 OS=Buchnera aphi... [more]
TRPE_VIBCH9.371e-1928.43Anthranilate synthase component 1 OS=Vibrio choler... [more]
TRPE_SERMA1.598e-1834.19Anthranilate synthase component 1 OS=Serratia marc... [more]
TRPE_VIBPA2.088e-1832.90Anthranilate synthase component 1 OS=Vibrio paraha... [more]
TRPE_ECOLI2.088e-1834.19Anthranilate synthase component 1 OS=Escherichia c... [more]
TRPE_SALTY4.651e-1834.19Anthranilate synthase component 1 OS=Salmonella ty... [more]
TRPE_LEPBI1.767e-1731.31Anthranilate synthase component 1 OS=Leptospira bi... [more]
TRPE_AZOBR2.308e-1732.63Anthranilate synthase OS=Azospirillum brasilense G... [more]
TRPE_BUCSC8.771e-1729.77Anthranilate synthase component 1 OS=Buchnera aphi... [more]

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Properties
Property NameValue
Genbank descriptionC31701F04EF StrClemenN Citrus clementina cDNA clone C31701F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923149 ID=FC923149; Name=FC923149; organism=Citrus clementina; type=EST; length=746bp
AGAACAGAAGCTTATTGGCTTAAGAGCTTCTTCACAAGGCAGTTGGAGGA
GCAGAATTTACATGCTCCAACAGTTTCTCGAAATAAATCAGCCTTTATTT
CTGAGGTATCAAGAGGGGACTACGTAAACAATGTTGAGAACTGTCTGAAA
TACATAAAAGATGGAGAAAGCTATGAGTTATGTCTTACAACCCAGCTACG
AAAAAGAATTGGGGAAATAGATTCTTTGGGGCTTTACCTTCACCTTAGAG
AAAAAAATCCAGCACCATATGCTGCCTGGCTTAGTTTTTCTAAGGAGGAT
TTATGCATTTGTTGTTCTTCTCCTGAGAGGTTTCTACGATTGGATAAGAA
TGACTTATTAGAAGCAAAACCCATCAAGGGTACCATAGCTCGTGGATCCA
CACCAGAAGAAGATGAACAGCTCAAATTGCAACTGCAGTATAGTGAAAAG
GATCAGGCTGAAAATTTGATGATAGTGGATCTTCTAAGGAATGACCTTGG
TCGTGTCTGTGAGCCGGGATCTGTACATGTCCCAAATCTCATGAATGTGG
AATCATATGCAACAGTTCACACCATGGTGAGTACAATCTGTGGGAAAAAG
CATTCAAATGTTAGTGCAGTTTATTGTGTCAGAGCAGCATTCCCAGGTGG
TTCAATGACTGGTGCACCAAGTTGAGGTCGATGGGAATTCTGAGTCTATT
GAGAGTGTTCTCGGGGTACTACTCTGGCTCATTGGGTATTCTCATA
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