FC923152

Overview
NameFC923152
Unique NameFC923152
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length716
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923152 vs. ExPASy Swiss-Prot
Match: PHT19_ORYSJ (Probable inorganic phosphate transporter 1-9 OS=Oryza sativa subsp. japonica GN=PHT1-9 PE=2 SV=2)

HSP 1 Score: 233.032 bits (593), Expect = 1.196e-60
Identity = 119/193 (61.66%), Postives = 148/193 (76.68%), Query Frame = 1
Query:  142 QLTVLNALDVAKTQLYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYY----HVDGAKK-PGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIVSGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGIVALIVSSAFDH 705
            ++ VL ALD A+TQ YHF AIVIAGMG FTD+YDLFCIS V K+ GR+YY     VDG+   PG  PP V +A  GVAL G +AG + FG LGD++GR++VYG  L+LMV SS+ SGLS  ++ +  +A+LCFFRF LG G+GGDYPLSATIMSE+AN++TRGAFIAAVF+MQGFGIL    V + V++AFDH
Sbjct:    4 RIRVLAALDQARTQYYHFKAIVIAGMGLFTDSYDLFCISPVMKIFGRVYYAPSGSVDGSGSGPGVTPPAVVSATVGVALLGAVAGNVVFGALGDRVGRRRVYGACLLLMVCSSVGSGLSVCRTRRCALASLCFFRFLLGVGVGGDYPLSATIMSEFANRRTRGAFIAAVFSMQGFGILVSSAVTMAVAAAFDH 196          
BLAST of FC923152 vs. ExPASy Swiss-Prot
Match: PHT19_ARATH (Probable inorganic phosphate transporter 1-9 OS=Arabidopsis thaliana GN=PHT1-9 PE=2 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 2.671e-52
Identity = 107/187 (57.22%), Postives = 138/187 (73.80%), Query Frame = 1
Query:  142 QLTVLNALDVAKTQLYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIVSGLSFGKSAKG-VIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGIVALIVSSAF 699
            +L++L+ALD A+ Q YHF AI++AGMG FTDAYDLFCI+ + K++ +IYYH D     GT   + S A+   AL GT  GQL FG+LGD++GR+KVYG++L++MV SS   G S   + +  V+ +L FFRF LG GIGGDYPLSATIMSE+ANK+TRGAFIAAVF+MQG GIL    V ++V  AF
Sbjct:    3 ELSLLSALDAARIQWYHFKAIIVAGMGLFTDAYDLFCIAPIMKMISQIYYHKDSI---GTALLSTSYAI---ALLGTALGQLIFGYLGDRVGRRKVYGLSLLIMVFSSFGCGFSVCTTRRSCVMVSLGFFRFVLGLGIGGDYPLSATIMSEFANKRTRGAFIAAVFSMQGLGILMSSAVTMVVCLAF 183          
BLAST of FC923152 vs. ExPASy Swiss-Prot
Match: PHT18_ARATH (Probable inorganic phosphate transporter 1-8 OS=Arabidopsis thaliana GN=PHT1-8 PE=2 SV=2)

HSP 1 Score: 201.445 bits (511), Expect = 3.856e-51
Identity = 103/186 (55.38%), Postives = 136/186 (73.12%), Query Frame = 1
Query:  145 LTVLNALDVAKTQLYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIVSGLSFGKSAKG-VIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGIVALIVSSAF 699
            + VL++LDVA+TQ YHF AI++AGMG FTDAYDLFCI+ V K++  +YY+ D      ++   V +    +AL GT  GQL FG+LGD++GR++VYG+ LI+M++SS   G S   + +  V+ +L FFRF+LG GIGGDYPLSATIMSE+ANK+TRGAFIAAVF+MQG GIL    V + V  AF
Sbjct:    3 IKVLSSLDVARTQWYHFKAIIVAGMGLFTDAYDLFCIAPVMKMISHVYYNGD------SINTAVLSTSYAIALLGTATGQLVFGYLGDRVGRRRVYGLCLIIMILSSFGCGFSVCTTRRSCVMVSLGFFRFFLGLGIGGDYPLSATIMSEFANKRTRGAFIAAVFSMQGLGILVSSAVTMAVCVAF 182          
BLAST of FC923152 vs. ExPASy Swiss-Prot
Match: PHO84_YEAST (Inorganic phosphate transporter PHO84 OS=Saccharomyces cerevisiae GN=PHO84 PE=1 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 8.932e-32
Identity = 71/166 (42.77%), Postives = 104/166 (62.65%), Query Frame = 1
Query:  202 IVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIVSGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGIVALIVSSAF 699
            I IAG+GF TD+YD+F I+L   ++  +Y+H       G++P      +      GT+ GQ  FG L D +GRK++YG+ LI+M++ +I+        A   +A L F+R  +G GIGGDYPLS+ I SE+A  K RGA + AVFA Q +G +SGGI+ALI+ +A+
Sbjct:   66 ISIAGVGFLTDSYDIFAINLGITMMSYVYWH-------GSMPGPSQTLLKVSTSVGTVIGQFGFGTLADIVGRKRIYGMELIIMIVCTILQTTVAHSPAINFVAVLTFYRIVMGIGIGGDYPLSSIITSEFATTKWRGAIMGAVFANQAWGQISGGIIALILVAAY 224          
BLAST of FC923152 vs. ExPASy Swiss-Prot
Match: YBN1_SCHPO (Putative inorganic phosphate transporter C8E4.01c OS=Schizosaccharomyces pombe GN=SPBC8E4.01c PE=1 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 1.290e-30
Identity = 71/176 (40.34%), Postives = 107/176 (60.80%), Query Frame = 1
Query:  193 FTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYH--VDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIVSGLSFGKSAKGVIATLCFFRFW---LGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGIVALIVSSAFDH 705
            F  +++AG+GFF D+YDLF I+LVT +   +Y+     G    G  P  +   VN  A  G + GQL FG++GD  GRK VYG  +++++I++++  ++  KS    ++ + +   W   LG GIGGDYP+SA I SE +  K RG  I+ +FA QGFG L+G IV +I+   F+H
Sbjct:   45 FKLMMLAGVGFFLDSYDLFIINLVTPIFEYLYWGGIEKGPTGKGHYPSGIRGLVNASANIGNIFGQLLFGFMGDFFGRKFVYGKEMVIVIIATVLV-IAMPKSIHSPLSKMMWVFCWRWLLGVGIGGDYPMSAAITSERSKIKRRGTLISLIFAFQGFGTLAGAIVTIILLGCFEH 219          
BLAST of FC923152 vs. ExPASy Swiss-Prot
Match: YHD1_SCHPO (Putative inorganic phosphate transporter C1683.01 OS=Schizosaccharomyces pombe GN=SPBC1683.01 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.200e-30
Identity = 71/176 (40.34%), Postives = 106/176 (60.23%), Query Frame = 1
Query:  193 FTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYH--VDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIVSGLSFGKSAKGVIATLCFFRFW---LGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGIVALIVSSAFDH 705
            F  +++AG+GFF D+YDLF I+LVT +   +Y+     G    G  P  +   VN  +  G + GQL FG++GD  GRK VYG  +I+++I++I+  ++  KS    ++ + +   W   LG GIGGDYP+SA I SE +    RG  I+ +FA QGFG L+G IV +I+   F+H
Sbjct:   45 FRLMMLAGVGFFLDSYDLFIINLVTPIFEYLYWGGIEKGPNGKGHYPSGIRGLVNAASNIGNIFGQLMFGFMGDFFGRKFVYGKEMIIVIIATILL-IAMPKSIHSPLSKMMWVFCWRWLLGVGIGGDYPMSAAITSERSKLNRRGTLISLIFAFQGFGTLAGAIVTIILLGCFEH 219          
BLAST of FC923152 vs. ExPASy Swiss-Prot
Match: YAEC_SCHPO (Putative inorganic phosphate transporter C23D3.12 OS=Schizosaccharomyces pombe GN=SPAC23D3.12 PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.991e-28
Identity = 69/173 (39.88%), Postives = 104/173 (60.12%), Query Frame = 1
Query:  193 FTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIVSGLSFGKSAKGVIATLCFFRFW---LGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGIVALIVSSAFD 702
            F  +  AG GFF D+YDLF I+LV+ +   +Y+     KKP   P  +   VN  A  G + GQ+ FG++GD  GRK VYG  +I+++I++++  ++  KS    +  + +   W   LG GIGGDYP+SATI SE +    RG  ++ VF+ QGFG L+G IV +I+ + F+
Sbjct:   43 FKLMGFAGAGFFLDSYDLFIINLVSPIYEYLYWGGLEGKKPH-YPSGIHGLVNAAANIGNVFGQILFGFMGDFFGRKFVYGKEMIVVIIATVLV-IALPKSIPTPLGKMMWIFAWRWLLGLGIGGDYPMSATITSERSLLSRRGTLLSIVFSFQGFGTLAGAIVTIILLACFE 213          
BLAST of FC923152 vs. ExPASy Swiss-Prot
Match: YCX2_SCHPO (Probable metabolite transporter C2H8.02 OS=Schizosaccharomyces pombe GN=SPCC2H8.02 PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.249e-25
Identity = 66/169 (39.05%), Postives = 99/169 (58.58%), Query Frame = 1
Query:  202 IVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIVSGLSFGK--SAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGIVALIVSSAFD 702
            + IAG GF  D+YDLF I+LV+ +L  +Y+   G       P  +   VN     G + GQL FG+LGD  GRK VYG  +++++I++I+      +  +    +  L  FR  LG GIGGDYP+SA+I SE +    RGA +A +F+ QG+G L+G +  LI+ + F+
Sbjct:   42 LAIAGTGFLLDSYDLFIINLVSPILAYLYW--GGLTGHQDYPSGIRGVVNAATNIGNIMGQLLFGFLGDFFGRKFVYGKEMMVVIIATILIICLPDRIPTPTAKMMWLFAFRVMLGIGIGGDYPMSASITSEQSLINRRGALLAWIFSNQGWGTLAGCVATLIILACFE 208          
BLAST of FC923152 vs. ExPASy Swiss-Prot
Match: YHM9_SCHPO (Probable metabolite transport protein C1271.09 OS=Schizosaccharomyces pombe GN=SPBC1271.09 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.060e-16
Identity = 60/187 (32.09%), Postives = 92/187 (49.20%), Query Frame = 1
Query:  178 TQLYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNG-VALCGTLAGQLFFGWLGDKLGRKK-VYGITLILMVISSIVSGL-SFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRG----AFIAAVFAMQGFGILSGGIVALIVSSAF-DHQFR 714
            +Q  HF  + +AG+   +D Y    I  V  +L ++Y        P     N S    G +A  GT+ GQL FGW  D+ GRK  +   T+IL+V +++ +G   +  S  G+++ L  +RF+LG GIG +YP  +   SE +N+   G    AFI        FG + G +V  I+   F +H  R
Sbjct:   71 SQWKHFLNVAVAGVALMSDGYCSNSIGTVITILRKLY--------PEETTHNKSLQDIGMIAYVGTIVGQLSFGWYSDRFGRKNGMITATIILIVSTALCTGAYGYKGSINGMLSALIAYRFFLGIGIGAEYPCGSVAASESSNELKSGLRHAAFIVVTDGAIDFGFVVGALVPYILVCIFGEHHLR 249          
BLAST of FC923152 vs. ExPASy Swiss-Prot
Match: BENK_ACIAD (Benzoate transport protein OS=Acinetobacter sp. (strain ADP1) GN=benK PE=3 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 2.444e-13
Identity = 53/189 (28.04%), Postives = 84/189 (44.44%), Query Frame = 1
Query:  142 QLTVLNALDVAKTQLYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKL-----GRKKVYGITLILMVISSIVSGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGIVALIVSS 693
            ++ V   +D +K   +H+  I+++ +    D YDL    +   LL           K   + P  +  +  +AL G + G L FG + DKL      RKKV  + +IL  + +++ G S              FRF  G GIGG  P    ++SEYA KK +  F+  +F+    G   GG+ A  + S
Sbjct:    4 EINVNQMIDDSKLTPFHWRVIILSTLIIIFDGYDLVIYGVALPLL----------MKEWAIDPVTAGFIGSIALFGMMFGALIFGTIADKLEHLGVSRKKVIAVCIILFSLCTVLCGFS------ETTTQFSIFRFLAGVGIGGVMPNVIALVSEYAPKKFKSFFVTLMFS----GYAIGGMTAAFLGS 172          
The following BLAST results are available for this feature:
BLAST of FC923152 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
PHT19_ORYSJ1.196e-6061.66Probable inorganic phosphate transporter 1-9 OS=Or... [more]
PHT19_ARATH2.671e-5257.22Probable inorganic phosphate transporter 1-9 OS=Ar... [more]
PHT18_ARATH3.856e-5155.38Probable inorganic phosphate transporter 1-8 OS=Ar... [more]
PHO84_YEAST8.932e-3242.77Inorganic phosphate transporter PHO84 OS=Saccharom... [more]
YBN1_SCHPO1.290e-3040.34Putative inorganic phosphate transporter C8E4.01c ... [more]
YHD1_SCHPO2.200e-3040.34Putative inorganic phosphate transporter C1683.01 ... [more]
YAEC_SCHPO5.991e-2839.88Putative inorganic phosphate transporter C23D3.12 ... [more]
YCX2_SCHPO1.249e-2539.05Probable metabolite transporter C2H8.02 OS=Schizos... [more]
YHM9_SCHPO1.060e-1632.09Probable metabolite transport protein C1271.09 OS=... [more]
BENK_ACIAD2.444e-1328.04Benzoate transport protein OS=Acinetobacter sp. (s... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31701F07EF StrClemenN Citrus clementina cDNA clone C31701F07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923152 ID=FC923152; Name=FC923152; organism=Citrus clementina; type=EST; length=716bp
GGAGACTATTCTGCCCTTTCACTCACTTATTAAATAGCAGGCCAACACAA
CCAAATTCTCACCATCCCCCTTCCTTCCTTCGCTGCAAGTACAGGAAAGA
AGGCATAGTATCTAGCATTCTAGCTAGCCATGGCTGGAGATCAACTGACA
GTGCTTAATGCACTTGATGTAGCAAAGACTCAATTGTACCATTTCACAGC
AATTGTAATTGCTGGAATGGGATTCTTCACAGATGCATACGACTTGTTTT
GCATCTCCTTGGTCACGAAGTTACTCGGTCGCATCTACTACCACGTCGAT
GGTGCAAAAAAGCCCGGTACATTGCCTCCCAACGTGTCAGCTGCTGTAAA
CGGCGTCGCGTTGTGTGGTACTTTAGCCGGCCAGCTCTTCTTCGGATGGC
TTGGCGACAAATTAGGCCGCAAAAAAGTTTACGGGATAACACTAATCCTC
ATGGTCATCAGCTCAATTGTCTCCGGACTTTCCTTCGGAAAATCCGCAAA
GGGTGTCATTGCAACTCTTTGCTTTTTCAGGTTTTGGCTTGGTTTCGGTA
TTGGTGGTGACTATCCGCTATCAGCTACAATTATGTCTGAATACGCAAAC
AAGAAGACTCGCGGTGCTTTCATTGCTGCGGTGTTCGCTATGCAAGGATT
TGGGATTTTATCTGGAGGGATTGTGGCTCTAATAGTTTCATCAGCGTTTG
ATCATCAATTCAGGCC
back to top