FC923156

Overview
NameFC923156
Unique NameFC923156
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length532
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923156 vs. ExPASy Swiss-Prot
Match: DFRA_SOLLC (Dihydroflavonol-4-reductase OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.075e-22
Identity = 65/154 (42.21%), Postives = 97/154 (62.99%), Query Frame = 3
Query:   36 LVSLPGATKLNVRVYEANILDNEAISRAIEGCKGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEA-AKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSHKI--W-YSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPF 485
            L+ LP A   N+ +++A++    +   AI+GC+GVFH+A+P   +  KDPE E++ P V+G L+++E+ AK   V+R+V TSS  ++    +  Q    DETSW+DLDF  + K+  W Y +SK LAEKAA E A KN  D ++I P   +GPF
Sbjct:   60 LLELPKADT-NLTLWKADLAVEGSFDEAIQGCQGVFHVATPMDFES-KDPENEVIKPTVRGMLSIIESCAKANTVKRLVFTSSAGTLDVQED--QKLFYDETSWSDLDFIYAKKMTGWMYFVSKILAEKAAMEEARKNNIDFISIIPPLVVGPF 209          
BLAST of FC923156 vs. ExPASy Swiss-Prot
Match: BAN_ARATH (Leucoanthocyanidin reductase OS=Arabidopsis thaliana GN=BAN PE=1 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 6.037e-22
Identity = 52/142 (36.62%), Postives = 92/142 (64.79%), Query Frame = 3
Query:   66 NVRVYEANILDNEAISRAIEGCKGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAA-KKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSHKIW---YSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLG 479
            ++++++A++ D ++   +  GC+ +FH+A+P      +DPEK+++ PA+QG +NVL++  K   V+RV+ TSS +++  N     G V++E +WTD++F    K +   Y +SK LAEK AWEFA++N  ++V + PA   G
Sbjct:   61 DLKIFKADLTDEDSFESSFSGCEYIFHVATPINFKS-EDPEKDMIKPAIQGVINVLKSCLKSKSVKRVIYTSSAAAVSINNLSGTGIVMNEENWTDVEFLTEEKPFNWGYPISKVLAEKTAWEFAKENKINLVTVIPALIAG 201          
BLAST of FC923156 vs. ExPASy Swiss-Prot
Match: DFRA_PETHY (Dihydroflavonol-4-reductase OS=Petunia hybrida GN=DFRA PE=2 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 1.345e-21
Identity = 64/157 (40.76%), Postives = 97/157 (61.78%), Query Frame = 3
Query:   36 LVSLPGATKLNVRVYEANILDNEAISRAIEGCKGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEA-AKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSHKI--W-YSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQP 494
            L+ LP A   N+ +++A++    +   AI+GC+GVFH+A+P   +  KDPE E++ P V+G L+++E+ AK   V+R+V TSS  ++  +    Q    D+TSW+DLDF  + K+  W Y  SK LAEKAA E A+K   D ++I P   +GPF  P
Sbjct:   58 LLELPKADT-NLTLWKADLTVEGSFDEAIQGCQGVFHVATPMDFES-KDPENEVIKPTVRGMLSIIESCAKANTVKRLVFTSSAGTL--DVQEQQKLFYDQTSWSDLDFIYAKKMTGWMYFASKILAEKAAMEEAKKKNIDFISIIPPLVVGPFITP 210          
BLAST of FC923156 vs. ExPASy Swiss-Prot
Match: DFRA_ANTMA (Dihydroflavonol-4-reductase OS=Antirrhinum majus GN=DFRA PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 1.818e-18
Identity = 58/157 (36.94%), Postives = 92/157 (58.60%), Query Frame = 3
Query:   36 LVSLPGATKLNVRVYEANILDNEAISRAIEGCKGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFG-VRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSHKI--W-YSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQP 494
            L+ LP A   N+ +++A++    +   AI+GC+GVFHLA+    D   DPE E++ P + G LN++++  +   V++ + T+S  ++  N    Q  V DET  +D+DF  S K+  W Y +SK LAEKA  E A++N  D ++I P   +GPF  P
Sbjct:   60 LIELPKADT-NLTLWKADMTVEGSFDEAIQGCEGVFHLATSMEFDSV-DPENEVIKPTIDGMLNIIKSCVQAKTVKKFIFTTSGGTV--NVEEHQKPVYDETDSSDMDFINSKKMTGWMYFVSKILAEKAGMEAAKENNIDFISIIPPLVVGPFIMP 212          
BLAST of FC923156 vs. ExPASy Swiss-Prot
Match: ALD2_SPOSA (Aldehyde reductase 2 OS=Sporobolomyces salmonicolor PE=1 SV=3)

HSP 1 Score: 70.4774 bits (171), Expect = 5.664e-12
Identity = 50/129 (38.76%), Postives = 73/129 (56.59%), Query Frame = 3
Query:   87 NILDNEAISRAIEGCKGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKF-GVRRVVLTSS-ISSIVPNPNWPQGKVIDETSWT--DLDFCKS-------HKIW-YSMSKTLAEKAAWEFAEKN 437
            ++L   A    I+G  GV H+AS  +  +  D   E++ PA+ GTLN L AA     V+R VLTSS +S+++P PN  +G  +DE SW    +D  K+         +W Y+ SKT AE AAW+F ++N
Sbjct:   71 DMLKQGAYDEVIKGAAGVAHIASVVSFSNKYD---EVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPN-VEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDEN 195          
BLAST of FC923156 vs. ExPASy Swiss-Prot
Match: YGD9_YEAST (Putative uncharacterized oxidoreductase YGL039W OS=Saccharomyces cerevisiae GN=YGL039W PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 7.397e-12
Identity = 53/149 (35.57%), Postives = 81/149 (54.36%), Query Frame = 3
Query:  132 KGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFG---VRRVVLTSSISSIV-PNPNWPQGKVIDETSWT--DLDFCKSHKI-WYSMSKTLAEKAAWEFAEKNGTDV----VAIHPATSLGP--FPQPY---VNASGAVLQRL 530
            K V H+ASP   +   D EK+LLIPAV GT ++LEA K +    V +VV+TSS++++  P        V++E SW     + C+++ +  Y  SK  AEK AW+F E+N + +      I+P    GP  F       +N+S A++  L
Sbjct:   81 KVVLHIASPVHFNTT-DFEKDLLIPAVNGTKSILEAIKNYAADTVEKVVITSSVAALASPGDMKDTSFVVNEESWNKDTWESCQANAVSAYCGSKKFAEKTAWDFLEENQSSIKFTLSTINPGFVFGPQLFADSLRNGINSSSAIIANL 228          
BLAST of FC923156 vs. ExPASy Swiss-Prot
Match: YGP7_YEAST (Putative uncharacterized oxidoreductase YGL157W OS=Saccharomyces cerevisiae GN=YGL157W PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.152e-11
Identity = 55/155 (35.48%), Postives = 81/155 (52.26%), Query Frame = 3
Query:   60 KLNVRVYEANILDN---EAISRAIEGCKGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFG---VRRVVLTSSISSIVPNPNWPQGK-VIDETSWT--DLDFCKSHKI-WYSMSKTLAEKAAWEFAEKNGTDV----VAIHPATSLGP 482
            KL++ + E     N   E   +  +  K V H ASP   +     EK+LL PAV GT ++LEA KK+    V +V++TSS +++V   +  +G  VI E SW     D C+++ +  Y  SK  AEK AWEF ++N + V      I+P    GP
Sbjct:   53 KLSMEIVEDIAAPNAFDEVFKKHGKEIKIVLHTASPFHFETTNF-EKDLLTPAVNGTKSILEAIKKYAADTVEKVIVTSSTAALVTPTDMNKGDLVITEESWNKDTWDSCQANAVAAYCGSKKFAEKTAWEFLKENKSSVKFTLSTINPGFVFGP 206          
BLAST of FC923156 vs. ExPASy Swiss-Prot
Match: YD541_YEAST (Putative uncharacterized oxidoreductase YDR541C OS=Saccharomyces cerevisiae GN=YDR541C PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.811e-11
Identity = 48/126 (38.10%), Postives = 69/126 (54.76%), Query Frame = 3
Query:  138 VFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFG---VRRVVLTSSISSIVPNPNWPQGKVI-DETSWTDL--DFCKSHKI-WYSMSKTLAEKAAWEFAEKNGTDV----VAIHPATSLGP 482
            V H ASP   D   + EK+LLIPA++GT N+L + KK+    V RVV+TSS ++I+         V+  E SW +   + C+   I  Y  SK  AEKAAWEF ++N   +      ++P+   GP
Sbjct:   80 VLHTASPFHYDTT-EYEKDLLIPALEGTKNILNSIKKYAADTVERVVVTSSCTAIITLAKMDDPSVVFTEESWNEATWESCQIDGINAYFASKKFAEKAAWEFTKENEDHIKFKLTTVNPSLLFGP 204          
BLAST of FC923156 vs. ExPASy Swiss-Prot
Match: GRE2_YEAST (NADPH-dependent methylglyoxal reductase GRE2 OS=Saccharomyces cerevisiae GN=GRE2 PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 8.179e-11
Identity = 51/129 (39.53%), Postives = 68/129 (52.71%), Query Frame = 3
Query:  132 KGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKF---GVRRVVLTSSISSI--VPNPNWPQGKVIDETSWTDL--DFCKSHKI-WYSMSKTLAEKAAWEFAEKNGTDV----VAIHPATSLGP 482
            K V H ASP   D   D E++LLIPAV G   +L + KK+    V RVVLTSS +++  +   N  +    +E SW     + C+S  +  Y  SK  AEKAAWEF E+N   V     A++P    GP
Sbjct:   76 KIVLHTASPFCFDIT-DSERDLLIPAVNGVKGILHSIKKYAADSVERVVLTSSYAAVFDMAKEN-DKSLTFNEESWNPATWESCQSDPVNAYCGSKKFAEKAAWEFLEENRDSVKFELTAVNPVYVFGP 202          
The following BLAST results are available for this feature:
BLAST of FC923156 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
DFRA_SOLLC2.075e-2242.21Dihydroflavonol-4-reductase OS=Solanum lycopersicu... [more]
BAN_ARATH6.037e-2236.62Leucoanthocyanidin reductase OS=Arabidopsis thalia... [more]
DFRA_PETHY1.345e-2140.76Dihydroflavonol-4-reductase OS=Petunia hybrida GN=... [more]
DFRA_ANTMA1.818e-1836.94Dihydroflavonol-4-reductase OS=Antirrhinum majus G... [more]
ALD2_SPOSA5.664e-1238.76Aldehyde reductase 2 OS=Sporobolomyces salmonicolo... [more]
YGD9_YEAST7.397e-1235.57Putative uncharacterized oxidoreductase YGL039W OS... [more]
YGP7_YEAST2.152e-1135.48Putative uncharacterized oxidoreductase YGL157W OS... [more]
YD541_YEAST2.811e-1138.10Putative uncharacterized oxidoreductase YDR541C OS... [more]
GRE2_YEAST8.179e-1139.53NADPH-dependent methylglyoxal reductase GRE2 OS=Sa... [more]

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Properties
Property NameValue
Genbank descriptionC31701F11EF StrClemenN Citrus clementina cDNA clone C31701F11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923156 ID=FC923156; Name=FC923156; organism=Citrus clementina; type=EST; length=532bp
CGTTGCTTGCTTTAACGGGGCTGACTCATAACAGCTTGGTCAGCCTCCCA
GGCGCCACCAAGCTCAACGTCCGTGTTTACGAGGCCAATATCTTAGACAA
CGAAGCAATTTCCAGGGCCATCGAGGGTTGCAAGGGGGTCTTCCATCTTG
CCTCTCCTAACACCCTGGATGATCCCAAGGACCCCGAAAAGGAGCTGCTC
ATTCCTGCTGTTCAAGGCACCCTCAATGTCTTAGAGGCTGCCAAGAAGTT
TGGTGTCAGGCGTGTGGTGCTCACCAGCTCCATTTCTTCCATTGTGCCTA
ATCCCAATTGGCCTCAAGGCAAGGTCATTGATGAAACTTCTTGGACCGAC
CTTGACTTTTGCAAGTCTCACAAGATATGGTATTCAATGTCAAAGACACT
AGCAGAAAAAGCAGCATGGGAATTTGCAGAGAAGAATGGAACGGATGTGG
TGGCAATCCATCCAGCCACATCTCTTGGGCCATTTCCGCAGCCTTACGTG
AACGCGAGCGGAGCTGTGCTGCAGCGTTTGTT
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