FC923161

Overview
NameFC923161
Unique NameFC923161
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length741
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923161 vs. ExPASy Swiss-Prot
Match: GDL4_ARATH (GDSL esterase/lipase At1g20120 OS=Arabidopsis thaliana GN=At1g20120 PE=2 SV=2)

HSP 1 Score: 209.92 bits (533), Expect = 1.163e-53
Identity = 111/249 (44.58%), Postives = 146/249 (58.63%), Query Frame = 1
Query:    1 TVSAVIVFGDSIVDTGNNNNLKTPAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVGEEGKNRIFERSFFLVVVGSNDINNNYFGSRIRRLQYDISTYTDLLVGHASTFLKEIYGLGARRIGVFGAPTLGCLPSTRTVAGGIKRDCAKE--YTKQRNYSTLNCLQNWIL*TSARRQDCYIDI 741
            T  A+  FGDSI+DTGNN+ + T  K NF PYG +F     TGRF NGK+PSD +A+ +GVK +  AYL P L  EDLLTGV+FASGG GYDPLT            QL  F+EYI+K++  VG+E    I  +   +VV GS+D+ N Y+G  +    YDI TYT  +   A++F  ++Y  GA++IG  G   +GC+P  RT  GG+KR CA E  +  Q   S L+   N +  T       YIDI
Sbjct:   75 TFPAIFAFGDSILDTGNNDYILTLIKANFLPYGMNFPDKVPTGRFCNGKIPSDFIADYIGVKPVVPAYLRPGLTQEDLLTGVSFASGGSGYDPLTP-IVVSAIPMSKQLTYFQEYIEKVKGFVGKEKAEHIISKGLAIVVAGSDDLANTYYGEHLEEFLYDIDTYTSFMASSAASFAMQLYESGAKKIGFIGVSPIGCIPIQRTTRGGLKRKCADELNFAAQLFNSKLSTSLNELAKTMKNTTLVYIDI 322          
BLAST of FC923161 vs. ExPASy Swiss-Prot
Match: APG_ARATH (Anter-specific proline-rich protein APG OS=Arabidopsis thaliana GN=APG PE=2 SV=2)

HSP 1 Score: 209.534 bits (532), Expect = 1.519e-53
Identity = 119/259 (45.95%), Postives = 157/259 (60.62%), Query Frame = 1
Query:    1 TVSAVIVFGDSIVDTGNNNNLKTPAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIV----------GEEGKNRIFERSFFLVVVGSNDINNNYFGSRIRRLQYDISTYTDLLVGHASTFLKEIYGLGARRIGVFGAPTLGCLPSTRTVAGGIKRDCAKE--YTKQRNYSTLNCLQNWIL*TSARRQDCYIDI 741
            T+ AV  FGDS+ DTGNNNNL+T  K N+ PYG DF+   ATGRFSNG V SD LA+ +GVKE+  AYLDP ++P DLLTGV+FASGG GY+P TT          DQL  F++YI+K+  +V          G E  N++  +   +VV GSND+   YFGS  +RL+ DI +YT ++   A++F+ ++YG GARRIGV G P LGC+PS R      K+ C +E  Y  Q   S L  +   +  T       Y+DI
Sbjct:  201 TIPAVFFFGDSVFDTGNNNNLETKIKSNYRPYGMDFKFRVATGRFSNGMVASDYLAKYMGVKEIVPAYLDPKIQPNDLLTGVSFASGGAGYNP-TTSEAANAIPMLDQLTYFQDYIEKVNRLVRQEKSQYKLAGLEKTNQLISKGVAIVVGGSNDLIITYFGSGAQRLKNDIDSYTTIIADSAASFVLQLYGYGARRIGVIGTPPLGCVPSQRLKK---KKICNEELNYASQLFNSKLLLILGQLSKTLPNSTFVYMDI 455          
BLAST of FC923161 vs. ExPASy Swiss-Prot
Match: GDL89_ARATH (GDSL esterase/lipase At5g63170 OS=Arabidopsis thaliana GN=At5g63170 PE=3 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 5.772e-53
Identity = 106/209 (50.72%), Postives = 135/209 (64.59%), Query Frame = 1
Query:    4 VSAVIVFGDSIVDTGNNNNLKTPAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVGEEGKNR-IFERSFFLVVVGSNDINNNYFGSRIRRLQYDISTYTDLLVGHASTFLKEIYGLGARRIGVFGAPTLGCLPSTRTVAGGI 627
            + AVI FGDSI+DTGNNN L T  K NF PYGRDF    ATGRF NG++P+D++AE LG+K +  AY  P L+P D+LTGV+FASGG G DP+T R         DQL  FK YI KL +I G+E K R I   + F++  G+NDI   YF + IR  +Y I +YTDL+V    +F+KE+Y LGAR+  + G   LGCLP      GG+
Sbjct:   26 IPAVIAFGDSILDTGNNNYLMTLTKVNFYPYGRDFVTRRATGRFGNGRIPTDLIAEGLGIKNIVPAYRSPFLEPNDILTGVSFASGGSGLDPMTAR-IQGVIWVPDQLNDFKAYIAKLNSITGDEEKTRSIISNAVFVISAGNNDIAITYFTNPIRNTRYTIFSYTDLMVSWTQSFIKELYNLGARKFAIMGTLPLGCLPGASNALGGL 233          
BLAST of FC923161 vs. ExPASy Swiss-Prot
Match: APG_BRANA (Anther-specific proline-rich protein APG (Fragment) OS=Brassica napus GN=APG PE=2 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 4.967e-50
Identity = 99/209 (47.37%), Postives = 136/209 (65.07%), Query Frame = 1
Query:    1 TVSAVIVFGDSIVDTGNNNNLKTPAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDP------TLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVGEEGKNRIFERSFFLVVVGSNDINNNYFGSRIRRLQYDISTYTDLLVGHASTFLKEIYGLGARRIGVFGAPTLGCLPSTR 609
            T+ AV  FGDSI DTGNNNNL T  KCN+ PYG DF  G ATGRFSNG+V SD +++ LGVKE+  AY+D        L+  DLLTGV+FASGG GY P T+          DQL  F++Y  +++ +VG++   +I  +   +VV GSND+   YFG+  + L+ D+ ++T ++   A++F+ ++YG GARRIGV G P +GC PS R
Sbjct:  122 TIPAVFFFGDSIFDTGNNNNLDTKLKCNYRPYGMDFPMGVATGRFSNGRVASDYISKYLGVKEIVPAYVDKKLQQNNELQQSDLLTGVSFASGGAGYLPQTSE-SWKVTTMLDQLTYFQDYKKRMKKLVGKKKTKKIVSKGAAIVVAGSNDLIYTYFGNGAQHLKNDVDSFTTMMADSAASFVLQLYGYGARRIGVIGTPPIGCTPSQR 329          

HSP 2 Score: 24.2534 bits (51), Expect = 4.967e-50
Identity = 13/28 (46.43%), Postives = 19/28 (67.86%), Query Frame = 3
Query:  627 KERLCXR-IHEAAQLFNSKLSAELDSLN 707
            K+++C   ++ AAQLFNSKL   L  L+
Sbjct:  332 KKKICNEDLNYAAQLFNSKLVIILGQLS 359          
BLAST of FC923161 vs. ExPASy Swiss-Prot
Match: GDL30_ARATH (GDSL esterase/lipase At1g73610 OS=Arabidopsis thaliana GN=At1g73610 PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 2.443e-49
Identity = 103/206 (50.00%), Postives = 128/206 (62.14%), Query Frame = 1
Query:    1 TVSAVIVFGDSIVDTGNNNNLKTPAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVG-EEGKNRIFERSFFLVVVGSNDINNNYFGSRIRRLQYDISTYTDLLVGHASTFLKEIYGLGARRIGVFGAPTLGCLPSTRTV 615
            TVSA+  FGDSI+DTGNNN L + +K NF PYGRDF GG ATGRF NG+V SDI+AE LG+K L  AY DP L   DL TGV FASGG G DP+T R         DQ+  F+ YI +L  +VG +E  N +   + +L+  G+NDI   YF +  RRLQY +  Y D LV      +K +Y +GAR+  V G   LGCLP  R +
Sbjct:   32 TVSALFAFGDSILDTGNNNLLLSVSKVNFYPYGRDFIGGRATGRFGNGRVFSDIIAEGLGLKNLLPAYRDPYLWNNDLTTGVCFASGGSGLDPITAR-TTGSIWVSDQVTDFQNYITRLNGVVGNQEQANAVISNAVYLISAGNNDIAITYFTTGARRLQYTLPAYNDQLVSWTRDLIKSLYDMGARKFAVMGTLPLGCLPGARAL 236          

HSP 2 Score: 25.7942 bits (55), Expect = 2.443e-49
Identity = 12/31 (38.71%), Postives = 20/31 (64.52%), Query Frame = 3
Query:  615 GGRDKERLCXR-IHEAAQLFNSKLSAELDSL 704
            G R   R C   +++ A +FN +LSA++D+L
Sbjct:  232 GARALTRACELFVNQGAAMFNQQLSADIDNL 262          
BLAST of FC923161 vs. ExPASy Swiss-Prot
Match: GDL5_ARATH (GDSL esterase/lipase At1g23500 OS=Arabidopsis thaliana GN=At1g23500 PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 4.150e-49
Identity = 107/213 (50.23%), Postives = 129/213 (60.56%), Query Frame = 1
Query:    4 VSAVIVFGDSIVDTGNNNNLKTPAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVGEEGK-NRIFERSFFLVVVGSNDINNNYFGSRIRRLQYDISTYTDLLVGHASTFLKEIYGLGARRIGVFGAPTLGCLPSTRTVAGGIKRDC 639
            VSA+  FGDSI+DTGNNNNL T +KCNF PYGR+F GG ATGRF NG+V SD++AE L VK+L  AY DP L   DL TGV FASGG G D  T R         DQ++ FKEYI KL  +V ++ K N I   + +L+  G+ND+   Y        QY +STYTDLLV      LK +Y +GAR+  V G   LGCLP  R   G     C
Sbjct:   33 VSALFAFGDSILDTGNNNNLNTLSKCNFFPYGRNFIGGKATGRFGNGRVFSDMIAEGLNVKKLLPAYRDPNLSKNDLPTGVCFASGGSGLDERTAR-SQGVIWVPDQVKDFKEYIMKLNGVVRDKRKVNAIISNAVYLISAGNNDLAITY---PTLMAQYTVSTYTDLLVTWTDNLLKSLYAMGARKFAVLGTLPLGCLPGARHTGGNFGNIC 241          

HSP 2 Score: 25.0238 bits (53), Expect = 4.150e-49
Identity = 10/20 (50.00%), Postives = 17/20 (85.00%), Query Frame = 3
Query:  648 IHEAAQLFNSKLSAELDSLN 707
            I++ A +FN KLSA+L++L+
Sbjct:  245 INQVAAIFNQKLSAKLNNLH 264          
BLAST of FC923161 vs. ExPASy Swiss-Prot
Match: GDL34_ARATH (GDSL esterase/lipase At2g04570 OS=Arabidopsis thaliana GN=At2g04570 PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 5.590e-48
Identity = 97/216 (44.91%), Postives = 128/216 (59.26%), Query Frame = 1
Query:    4 VSAVIVFGDSIVDTGNNNNLKTPAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVGEEGKNRIFERSFFLVVVGSNDINNNYFGSRIRRLQYDISTYTDLLVGHASTFLKEIYGLGARRIGVFGAPTLGCLPSTRTVAGGIKRDCAKEY 651
            + A+IVFGDS VD GNNN + T A+ NF PYGRDF GG  TGRF NGK+ +D ++E LG+K +  AYLDP+    D  TGV FAS   GYD  T+           QL+ +KEY  KL+A  G++      E S +L+ +G+ND   NYF    R  QY +S Y D L G A  F+K+++GLGAR+I + G P +GC+P  R    G   +C   Y
Sbjct:   26 IPAIIVFGDSSVDAGNNNYIPTVARSNFEPYGRDFVGGKPTGRFCNGKIATDFMSEALGLKPIIPAYLDPSYNISDFATGVTFASAATGYDNATS-DVLSVLPLWKQLEYYKEYQTKLKAYQGKDRGTETIESSLYLISIGTNDFLENYFAFPGRSSQYSVSLYQDFLAGIAKEFVKKLHGLGARKISLGGLPPMGCMPLERATNIGTGGECVGRY 240          
BLAST of FC923161 vs. ExPASy Swiss-Prot
Match: GDL48_ARATH (GDSL esterase/lipase At2g42990 OS=Arabidopsis thaliana GN=At2g42990 PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 4.430e-45
Identity = 97/216 (44.91%), Postives = 124/216 (57.41%), Query Frame = 1
Query:    4 VSAVIVFGDSIVDTGNNNNLKTPAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVGEEGKNRIFERSFFLVVVGSNDINNNYFGSRIRRLQYDISTYTDLLVGHASTFLKEIYGLGARRIGVFGAPTLGCLPSTRTVAGGIKRDCAKEY 651
            + A+IVFGDS VD+GNNN + T A+ NF PYGRDF GG ATGRF NG++ SD  +E  G+K    AYLDP+    D  TGV FAS G GYD  +T           +++ FKEY   L A +G     +I   S ++V +G+ND   NY+    RR Q+ IS Y D LV  A  FLK+IY LGAR++   G   +GCLP  R         CA+ Y
Sbjct:   26 IPAIIVFGDSSVDSGNNNFISTMARANFEPYGRDFPGGRATGRFCNGRLSSDFTSEAYGLKPTVPAYLDPSYNISDFATGVCFASAGTGYDN-STADVLGVIPLWKEVEYFKEYQSNLSAYLGHRRAAKIIRESLYIVSIGTNDFLENYYTLPDRRSQFSISQYQDFLVEIAEVFLKDIYRLGARKMSFTGISPMGCLPLERVTNLDDPFSCARSY 240          
BLAST of FC923161 vs. ExPASy Swiss-Prot
Match: GDL72_ARATH (GDSL esterase/lipase At5g03810 OS=Arabidopsis thaliana GN=At5g03810 PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.289e-44
Identity = 101/230 (43.91%), Postives = 132/230 (57.39%), Query Frame = 1
Query:    4 VSAVIVFGDSIVDTGNNNNLKTPAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVGEEGKNRIFERSFFLVVVGSNDINNNYFGSRIRRLQYDISTYTDLLVGHASTFLKEIYGLGARRIGVFGAPTLGCLPSTRTVAGGIKRDCAKEYTKQRNYSTLNCLQN 693
            V A+I+ GDS+VD GNNN+  T  K NFPPYGRDF   +ATGRFSNGK+ +D  AE LG     +AYL       +LLTG NFASG  G+D   T           QL+ +KEY +K+  IVG+E  N IF  +  L+  GS+D   +Y+ + I    +    Y+D L+   STF++ +YGLGARRIGV   P LGCLP+  T+ GG+  +   E   Q   S    L N
Sbjct:   28 VPALIIMGDSVVDAGNNNHRITLVKANFPPYGRDFVAHSATGRFSNGKLATDFTAENLGFTSYPVAYLSQEANETNLLTGANFASGASGFDD-ATAIFYNAITLSQQLKNYKEYQNKVTNIVGKERANEIFSGAIHLLSTGSSDFLQSYYINPILNRIFTPDQYSDHLLRSYSTFVQNLYGLGARRIGVTTLPPLGCLPAAITLFGGVGNNMCVERLNQDAVSFNTKLNN 256          
BLAST of FC923161 vs. ExPASy Swiss-Prot
Match: GDL86_ARATH (GDSL esterase/lipase At5g45960 OS=Arabidopsis thaliana GN=At5g45960 PE=2 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.431e-43
Identity = 97/230 (42.17%), Postives = 131/230 (56.96%), Query Frame = 1
Query:    1 TVSAVIVFGDSIVDTGNNNNLKTPAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVGEEGKNRIFERSFFLVVVGSNDINNNYFGSRIRRLQYDISTYTDLLVGHASTFLKEIYGLGARRIGVFGAPTLGCLPSTRTVAGG---IKRDCAKEY-TKQRNYSTL 678
            +VSA++VFGDS VD GNNN + T  KCNFPPYG DF     TGRF NG++ +D +A  +GVKE    YLDP L   +L++GV+FAS G GYDPLT            QL+ F+EY  KL   +G++   +  E + F V  G+ND   NYF   IRR  + I  Y   ++ +   F++ ++  GAR+I V G P +GCLP   T+  G     R C   + T   NY+ L
Sbjct:   44 SVSAILVFGDSTVDPGNNNYIDTVFKCNFPPYGLDFRNKTPTGRFCNGRLVTDFIASYIGVKENVPPYLDPNLGINELISGVSFASAGSGYDPLTP-TITNVIDIPTQLEYFREYKRKLEGKMGKQEMEKHIEEAMFCVSAGTNDFVINYFTIPIRRKTFTIEAYQQFVISNLKQFIQGLWKEGARKITVAGLPPIGCLPIVITLFSGEALTNRRCIDRFSTVATNYNFL 272          
The following BLAST results are available for this feature:
BLAST of FC923161 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
GDL4_ARATH1.163e-5344.58GDSL esterase/lipase At1g20120 OS=Arabidopsis thal... [more]
APG_ARATH1.519e-5345.95Anter-specific proline-rich protein APG OS=Arabido... [more]
GDL89_ARATH5.772e-5350.72GDSL esterase/lipase At5g63170 OS=Arabidopsis thal... [more]
APG_BRANA4.967e-5047.37Anther-specific proline-rich protein APG (Fragment... [more]
GDL30_ARATH2.443e-4950.00GDSL esterase/lipase At1g73610 OS=Arabidopsis thal... [more]
GDL5_ARATH4.150e-4950.23GDSL esterase/lipase At1g23500 OS=Arabidopsis thal... [more]
GDL34_ARATH5.590e-4844.91GDSL esterase/lipase At2g04570 OS=Arabidopsis thal... [more]
GDL48_ARATH4.430e-4544.91GDSL esterase/lipase At2g42990 OS=Arabidopsis thal... [more]
GDL72_ARATH1.289e-4443.91GDSL esterase/lipase At5g03810 OS=Arabidopsis thal... [more]
GDL86_ARATH2.431e-4342.17GDSL esterase/lipase At5g45960 OS=Arabidopsis thal... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31701G04EF StrClemenN Citrus clementina cDNA clone C31701G04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923161 ID=FC923161; Name=FC923161; organism=Citrus clementina; type=EST; length=741bp
ACTGTTTCAGCAGTTATTGTATTTGGAGATTCAATCGTTGATACAGGCAA
TAACAATAATCTGAAAACGCCGGCTAAATGTAATTTTCCTCCTTATGGGA
GAGATTTCGAGGGAGGAGCGGCAACTGGCAGATTTTCTAATGGAAAGGTC
CCCTCAGACATTTTAGCGGAAGAATTGGGCGTAAAAGAGCTTTCGCTAGC
ATATCTGGATCCAACTCTGAAACCTGAAGATCTTCTCACAGGTGTAAACT
TTGCTTCCGGTGGCTGTGGATACGATCCTTTGACCACAAGACTTTCGGCA
GCAGCTTTATCATTATCTGATCAGCTCCAACTGTTCAAGGAATATATAGA
CAAGCTGAGAGCGATTGTTGGAGAAGAAGGCAAAAACAGAATCTTTGAAA
GAAGTTTTTTTTTGGTGGTAGTAGGAAGCAATGACATAAACAACAACTAT
TTTGGTAGCCGCATTAGGAGATTACAGTATGATATTTCTACTTACACGGA
CCTTCTAGTTGGACATGCTTCAACGTTCCTTAAGGAAATATATGGCCTTG
GGGCACGAAGGATTGGAGTGTTCGGTGCACCGACGCTTGGCTGTTTACCG
TCAACAAGAACGGTGGCGGGAGGGATAAAGAGAGATTGTGCNAAAGAATA
CACGAAGCAGCGCAATTATTCAACTCTAAATTGTCTGCAGAACTGGATTC
TCTGAACATCTGCCAGACGTCAGGATTGTTACATTGATATC
back to top