FC923161

Overview
NameFC923161
Unique NameFC923161
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length741
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923161 vs. ExPASy Swiss-Prot
Match: GLIP7_ARATH (GDSL esterase/lipase 7 OS=Arabidopsis thaliana GN=GLIP7 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.766e-23
Identity = 78/209 (37.32%), Postives = 106/209 (50.72%), Query Frame = 1
Query:   10 AVIVFGDSIVDTGNNNNLKTPAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYID-KLRAIVGEEGKNRIF-ERSFFLVVVGSNDINNNY-FGSRIRRLQ-YDISTYTDLLVGHASTFLKEIYGLGARRIGVFGAPTLGCLPSTRTVAGG 624
            A  VFGDS+VD+GNNN + T A+ N+ PYG DF  G  TGRF NG+   D  A  LG+  L   YL P    ++ L GVN+AS   G    T R          Q+  F+  I+ +LR         R +  +S   + +GSND  NNY    R    Q Y    Y DLL+   S  +  +Y LGAR++ + G+  LGC+PS  ++  G
Sbjct:   30 AFFVFGDSLVDSGNNNYIPTLARANYFPYGIDF--GFPTGRFCNGRTVVDYGATYLGL-PLVPPYLSPLSIGQNALRGVNYASAAAGILDETGRHYGARTTFNGQISQFEITIELRLRRFFQNPADLRKYLAKSIIGINIGSNDYINNYLMPERYSTSQTYSGEDYADLLIKTLSAQISRLYNLGARKMVLAGSGPLGCIPSQLSMVTG 235          
BLAST of FC923161 vs. ExPASy Swiss-Prot
Match: GDL28_ARATH (GDSL esterase/lipase At1g71250 OS=Arabidopsis thaliana GN=At1g71250 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 8.129e-23
Identity = 69/204 (33.82%), Postives = 102/204 (50.00%), Query Frame = 1
Query:    4 VSAVIVFGDSIVDTGNNNNLKTPAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVGEEGKNRIFERSFFLVVVGSNDINNNYFGSRI--RRLQYDISTYTDLLVGHASTFLKEIYGLGARRIGVFGAPTLGCLPSTR 609
            V A+ V GDS+VD GNNN L+T A+ NF PYG D      TGRFSNG    D+LA  L +      + DPT     +L GVN+AS   G   ++            Q+   +  + +LR ++  +       RS  ++V GSND  NNY    +    +++    + +LL+   +  L  +Y LG R+I + G   LGC+P+ R
Sbjct:   39 VPAMFVLGDSLVDAGNNNFLQTVARANFLPYGIDM-NYQPTGRFSNGLTFIDLLARLLEIPS-PPPFADPTTSGNRILQGVNYASAAAGILDVSGYNYGGRFSLNQQMVNLETTLSQLRTMMSPQNFTDYLARSLVVLVFGSNDYINNYLMPNLYDSSIRFRPPDFANLLLSQYARQLLTLYSLGLRKIFIPGVAPLGCIPNQR 240          
BLAST of FC923161 vs. ExPASy Swiss-Prot
Match: GDL87_ARATH (GDSL esterase/lipase At5g55050 OS=Arabidopsis thaliana GN=At5g55050 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.034e-22
Identity = 73/209 (34.93%), Postives = 104/209 (49.76%), Query Frame = 1
Query:    1 TVSAVIVFGDSIVDTGNNNNLKTP-AKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVK----ELSL-AYLDPTLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVGEEGKNRIFERSFFLVVVGSNDINNNYFGSRIRRLQYDISTYTDLLVGHASTFLKEIYGLGARRIGVFGAPTLGCLPSTR 609
            ++  + VFGDS+VD GNNN L    +K N+P  G DF     TGRF NGK  +D +AE+ G+      LSL   L    +    +TGVNFASGG G    + +          Q+  +    +++  +     +  +  +S F VV+GSND+ + YFGS   R Q +   YT L+       LK I+  GARR  + G   +GC P  R
Sbjct:   36 SIPGLYVFGDSLVDAGNNNYLPISISKANYPHNGVDFPNKKPTGRFCNGKNAADAIAEKFGLPLPPPYLSLRGLLKREKRKSAAVTGVNFASGGAGIFNSSDQKLGQAIPLSKQVNNWLSIHEEVMKLEPSAAQLHL-SKSLFTVVIGSNDLFD-YFGSFKLRRQSNPQQYTQLMADKLKEQLKRIHDSGARRFLIIGVAQIGCTPGKR 242          
BLAST of FC923161 vs. ExPASy Swiss-Prot
Match: GLIP6_ARATH (GDSL esterase/lipase 6 OS=Arabidopsis thaliana GN=GLIP6 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.174e-21
Identity = 77/234 (32.91%), Postives = 111/234 (47.44%), Query Frame = 1
Query:    1 TVSAVIVFGDSIVDTGNNN-NLKTPAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVK------ELSLAYLDPTLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVGEEGKNRIFERSFFLVVVGSNDINNNYFGSRIRRLQYDISTYTDLLVGHASTFLKEIYGLGARRIGVFGAPTLGCLPSTRTVAGGIKRDC-------AKEYTKQ 660
            TV A+  FGDSI D GNN+ N    A+ +FPPYG  F     TGRF+NG+  +D ++E +G+       EL +  L+ T    +   G+NFAS G G   L T           QLQ F+  +++         +  I + S FL+  GSNDI N +   R   L  D   Y + ++   +  + +IY LGARRI  F    +GC+P+   +       C       AK Y K+
Sbjct:   28 TVPAIFTFGDSIFDAGNNHYNKNCTAQADFPPYGSSFFH-RPTGRFTNGRTVADFISEFVGLPLQKPFLELQIQILNGT---SNFSNGINFASAGSGL-LLDTNKFMGVTPIQTQLQQFQTLVEQNLI------EKSIIQESLFLLETGSNDIFNYFLPFRAPTLSPD--AYVNAMLDQVNKTIDQIYKLGARRIAFFSLGPVGCVPARAMLPNAPTNKCFGKMNVMAKMYNKR 248          
BLAST of FC923161 vs. ExPASy Swiss-Prot
Match: GDL68_ARATH (GDSL esterase/lipase At4g30140 OS=Arabidopsis thaliana GN=At4g30140 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.826e-21
Identity = 69/212 (32.55%), Postives = 104/212 (49.06%), Query Frame = 1
Query:   19 VFGDSIVDTGNNNNLKTPAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVGEEGKNRIFERSFFLVVVGSNDINNNYFGS--RIRRLQYDISTYTDLLVGHASTFLKEIYGLGARRIGVFGAPTLGCLPSTRTVAGGIKRDCAKE 648
            VFGDS+ D GNNN L T AK N+ PYG D+  G  TGRFSNG+   D++AE  G       +   +    ++  G+N+ASG  G    T+          +++ L ++  +   AI+          +  + + +GSND  NNYF S   + R  ++   Y   L+     +L ++Y LGAR + +FG   +GC P      GG    CA+E
Sbjct:   36 VFGDSVFDNGNNNALNTKAKVNYLPYGIDYFQG-PTGRFSNGRNIPDVIAELAGFNNPIPPFAGASQAQANI--GLNYASGAGGIREETSE------NMGERISLRQQVNNHFSAIITAAVPLSRLRQCLYTINIGSNDYLNNYFLSPPTLARRLFNPDQYARSLISLYRIYLTQLYVLGARNVALFGIGKIGCTPRIVATLGG-GTGCAEE 237          
BLAST of FC923161 vs. ExPASy Swiss-Prot
Match: GLIP1_ARATH (GDSL esterase/lipase 1 OS=Arabidopsis thaliana GN=GLIP1 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.932e-20
Identity = 69/226 (30.53%), Postives = 104/226 (46.02%), Query Frame = 1
Query:    7 SAVIVFGDSIVDTGNNNNLKT--PAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKP----EDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVGEEGKNRIFERSFFLVVVGSNDINNNYFGSRIRRLQYDISTYTDLLVGHASTFLKEIYGLGARRIGVFGAPTLGCLPSTRTVAGGIKRDCAKEYTKQRN 666
            SA+ VFGDS+ D GNNN + T    + N+ PYG+     + TGR S+G++  D +AE        L  + P L+P         GVNFASGG G   L             QL  FK+  + LR+ +G+    R+  R+ +L  +G ND    +  +           Y D +VG+ +   KE+Y LG R+ G+       C P++  +     R C +  T+  N
Sbjct:   36 SALFVFGDSVFDAGNNNYIDTLSSVRSNYWPYGQT-TFKSPTGRVSDGRLIPDFIAEYAW-----LPLIPPNLQPFNGNSQFAYGVNFASGGAG--ALVGTFSGLVINLRTQLNNFKKVEEMLRSKLGDAEGKRVISRAVYLFHIGLNDYQYPFTTNSSLFQSISNEKYVDYVVGNMTDVFKEVYNLGGRKFGILNTGPYDCAPASLVIDQTKIRSCFQPVTELIN 253          
BLAST of FC923161 vs. ExPASy Swiss-Prot
Match: GLIP2_ARATH (GDSL esterase/lipase 2 OS=Arabidopsis thaliana GN=GLIP2 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.873e-18
Identity = 70/228 (30.70%), Postives = 104/228 (45.61%), Query Frame = 1
Query:    7 SAVIVFGDSIVDTGNNNNLKT--PAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPEDLLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVGEEGKNRIFERSFFLVVVGSNDI------NNNYFGSRIRRLQYDISTYTDLLVGHASTFLKEIYGLGARRIGVFGAPTLGCLPSTRTVAGGIKRDCAKEYTKQRN 666
            SA+ VFGDS+ D GNNN + T    + N+ PYG+       TGR S+G+   D +AE   +  L  AYL P+        GV+FAS G G   L             QL  FK+    LR+ +GE     +  R+ +L  +G ND       N++ F S  + +      Y D +VG+ +  +KE+Y +G R+ G        C P++  +       C K  T+  N
Sbjct:   38 SALFVFGDSVFDAGNNNYIDTLPSFRSNYWPYGQT-TFKFPTGRVSDGRTIPDFIAEYAWLP-LIPAYLQPSNGKNQFPYGVSFASAGAG--ALVGTFPGMVINLKSQLNNFKKVEKLLRSTLGEAQGKMVISRAVYLFHIGVNDYQYPFSTNSSIFQSSPQEI------YVDFVVGNTTAVIKEVYKIGGRKFGFLNMGAYDCAPASLIIDQTKIGTCFKPVTELIN 255          
BLAST of FC923161 vs. ExPASy Swiss-Prot
Match: GRIP4_ARATH (GDSL esterase/lipase 4 OS=Arabidopsis thaliana GN=GLIP4 PE=2 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 3.308e-16
Identity = 63/228 (27.63%), Postives = 102/228 (44.74%), Query Frame = 1
Query:    7 SAVIVFGDSIVDTGNNNNLKTPA--KCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKP----EDLLTGVNFASGGCGYDPLTT--RXXXXXXXXXDQLQLFKEYIDKLRAIVGEEGKNRIFERSFFLVVVGSNDINNNYFGSRIRRLQYDISTYTDLLVGHASTFLKEIYGLGARRIGVFGAPTLGCLPSTRTVAGGIKRDCAKEYTKQRN 666
            +A+  FGDS+ + GNNN   + +  + NF PYG+       TGR S+G++  D +AE        L  + P L+P      L  G+NFA+   G    T              QL  FK     LR+ +G+    R+  ++ +L  +G+ND    +F +           + D ++G+ +T ++E+Y LGAR+ G       GC PS   +       C +  T+  N
Sbjct:   36 AALFAFGDSLFEAGNNNYFDSISSFRSNFWPYGKT-TFKFPTGRVSDGRIMIDFIAEYAW-----LPLIPPNLQPGYSNSQLTYGLNFATTAAGVFAGTFPGSVTNLSKDLGTQLNNFKNVEKTLRSNLGDAEARRVISKAVYLFHIGANDYQYPFFANTSTFSNTTKERFIDFVIGNTTTVIEELYKLGARKFGFLSLGPFGCTPSALIINSTKIGSCFEPVTELIN 257          
BLAST of FC923161 vs. ExPASy Swiss-Prot
Match: GDL63_ARATH (GDSL esterase/lipase At4g16220 OS=Arabidopsis thaliana GN=At4g16220 PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.064e-14
Identity = 44/89 (49.44%), Postives = 56/89 (62.92%), Query Frame = 1
Query:    4 VSAVIVFGDSIVDTGNNNNLKTPAKCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPEDLLTGVNFASGGCG 270
            + A  VFGDS+V+ GNNN L T AK N  P G DF  G+ TGRF+NG+   DI+ + LG  EL+  YL PT +   +L G N+A GG G
Sbjct:   28 IPANFVFGDSLVEVGNNNYLATLAKANNFPNGIDF--GSPTGRFTNGRTIVDIIYQALGSDELTPPYLAPTTRGPLILNGANYAPGGSG 114          
BLAST of FC923161 vs. ExPASy Swiss-Prot
Match: GLIP3_ARATH (GDSL esterase/lipase 3 OS=Arabidopsis thaliana GN=GLIP3 PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.815e-14
Identity = 56/206 (27.18%), Postives = 96/206 (46.60%), Query Frame = 1
Query:    7 SAVIVFGDSIVDTGNNNNLKTPA--KCNFPPYGRDFEGGAATGRFSNGKVPSDILAEELGVKELSLAYLDPTLKPED----LLTGVNFASGGCGYDPLTTRXXXXXXXXXDQLQLFKEYIDKLRAIVGEEGKNRIFERSFFLVVVGSNDINNNYFGSRIRRLQYDISTYTDLLVGHASTFLKEIYGLGARRIGVFGAPTLGCLPST 606
            +A+ VFGDS+ D GNNN + T +  + N  PYG+           +N K P+  L++  G ++  L  + P L+P +       GV+FAS G G   L             QL  FK+    LR+ +G+    R+F R+ +L  +G+ND    +  +           + D ++G+ +  ++E+Y +G R+ G        C P++
Sbjct:   34 AALFVFGDSLFDAGNNNYINTVSSFRSNIWPYGQ-----------TNFKFPTGRLSD--GPEKAWLPSIPPNLQPNNGNNQFTYGVSFASAGAG--ALAESFLGMVINLGTQLNNFKDVEKSLRSELGDAETKRVFSRAVYLFHIGANDYFYPFSANSSTFKSNSKEKFVDFVIGNITFVIEEVYKMGGRKFGFLNVGPYECSPNS 224          
The following BLAST results are available for this feature:
BLAST of FC923161 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
GLIP7_ARATH4.766e-2337.32GDSL esterase/lipase 7 OS=Arabidopsis thaliana GN=... [more]
GDL28_ARATH8.129e-2333.82GDSL esterase/lipase At1g71250 OS=Arabidopsis thal... [more]
GDL87_ARATH4.034e-2234.93GDSL esterase/lipase At5g55050 OS=Arabidopsis thal... [more]
GLIP6_ARATH1.174e-2132.91GDSL esterase/lipase 6 OS=Arabidopsis thaliana GN=... [more]
GDL68_ARATH5.826e-2132.55GDSL esterase/lipase At4g30140 OS=Arabidopsis thal... [more]
GLIP1_ARATH4.932e-2030.53GDSL esterase/lipase 1 OS=Arabidopsis thaliana GN=... [more]
GLIP2_ARATH7.873e-1830.70GDSL esterase/lipase 2 OS=Arabidopsis thaliana GN=... [more]
GRIP4_ARATH3.308e-1627.63GDSL esterase/lipase 4 OS=Arabidopsis thaliana GN=... [more]
GDL63_ARATH1.064e-1449.44GDSL esterase/lipase At4g16220 OS=Arabidopsis thal... [more]
GLIP3_ARATH1.815e-1427.18GDSL esterase/lipase 3 OS=Arabidopsis thaliana GN=... [more]

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Properties
Property NameValue
Genbank descriptionC31701G04EF StrClemenN Citrus clementina cDNA clone C31701G04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923161 ID=FC923161; Name=FC923161; organism=Citrus clementina; type=EST; length=741bp
ACTGTTTCAGCAGTTATTGTATTTGGAGATTCAATCGTTGATACAGGCAA
TAACAATAATCTGAAAACGCCGGCTAAATGTAATTTTCCTCCTTATGGGA
GAGATTTCGAGGGAGGAGCGGCAACTGGCAGATTTTCTAATGGAAAGGTC
CCCTCAGACATTTTAGCGGAAGAATTGGGCGTAAAAGAGCTTTCGCTAGC
ATATCTGGATCCAACTCTGAAACCTGAAGATCTTCTCACAGGTGTAAACT
TTGCTTCCGGTGGCTGTGGATACGATCCTTTGACCACAAGACTTTCGGCA
GCAGCTTTATCATTATCTGATCAGCTCCAACTGTTCAAGGAATATATAGA
CAAGCTGAGAGCGATTGTTGGAGAAGAAGGCAAAAACAGAATCTTTGAAA
GAAGTTTTTTTTTGGTGGTAGTAGGAAGCAATGACATAAACAACAACTAT
TTTGGTAGCCGCATTAGGAGATTACAGTATGATATTTCTACTTACACGGA
CCTTCTAGTTGGACATGCTTCAACGTTCCTTAAGGAAATATATGGCCTTG
GGGCACGAAGGATTGGAGTGTTCGGTGCACCGACGCTTGGCTGTTTACCG
TCAACAAGAACGGTGGCGGGAGGGATAAAGAGAGATTGTGCNAAAGAATA
CACGAAGCAGCGCAATTATTCAACTCTAAATTGTCTGCAGAACTGGATTC
TCTGAACATCTGCCAGACGTCAGGATTGTTACATTGATATC
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