FC923193

Overview
NameFC923193
Unique NameFC923193
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length741
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923193 vs. ExPASy Swiss-Prot
Match: NIP21_MAIZE (Aquaporin NIP2-1 OS=Zea mays GN=NIP2-1 PE=2 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 4.004e-22
Identity = 54/147 (36.73%), Postives = 87/147 (59.18%), Query Frame = 3
Query:  273 FSVPFMQKLMAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQVPPYILCQVLGSTLAAGTLRLLFQEKQDQFAGTLPAGSNIQAFVMEFIITFYLMFVISGVATIT 713
            F    ++K+++E++ T+ ++F  C +  +  +++  +S  G S+  GL+V V++Y++GHISGAH NP+VT+A A  + FPW QVP Y   Q  GS  A+  L+ +          T P G +  + V+E I+TF +MFV   VAT T
Sbjct:   41 FPPHLLKKVVSEVVSTFLLVFVTCGAAGIYGSDKDRISQLGQSVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAVFRHFPWIQVPFYWAAQFTGSICASFVLKAVLHPIA-VLGTTTPTGPHWHSLVIEIIVTFNMMFVTLAVATDT 186          
BLAST of FC923193 vs. ExPASy Swiss-Prot
Match: AQPZ_RHOPA (Aquaporin Z OS=Rhodopseudomonas palustris GN=aqpZ PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.830e-22
Identity = 57/147 (38.78%), Postives = 86/147 (58.50%), Query Frame = 3
Query:  294 KLMAEILGTYFMIFAGCASVVVNLNNEKI-VSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQVPPYILCQVLGSTLAAGTLRLLFQE----------KQDQFAGTLPAGSNIQA-FVMEFIITFYLMFVISG 698
            K +AE++GT+++ FAGC S V+     ++ + L G+S+ +GL V+ + Y++GHISG H NP+VT+  A   RFP KQ+ PYI+ QVLG+  AA  L L+               + +    P   N+ A FVME ++T   +FVI G
Sbjct:    5 KYLAEMIGTFWLTFAGCGSAVIAAGFPQVGIGLVGVSLAFGLSVVTMAYAIGHISGCHLNPAVTLGLAAGGRFPVKQIAPYIIAQVLGAIAAAALLYLIASGAAGFDLAKGFASNGYGAHSPGQYNLVACFVMEVVMTMMFLFVIMG 151          
BLAST of FC923193 vs. ExPASy Swiss-Prot
Match: NIP23_MAIZE (Aquaporin NIP2-3 OS=Zea mays GN=NIP2-3 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.595e-21
Identity = 51/139 (36.69%), Postives = 82/139 (58.99%), Query Frame = 3
Query:  291 QKLMAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQVPPYILCQVLGSTLAAGTLRLLFQEKQDQFAGTLPAGSNIQAFVMEFIITFYLMFVISGVAT 707
            +K+++E++ T+ ++F  C +  +   +   +S  G S+  GL+V V++Y+ GHISGAH NP+VT++ A  + FPW QVP Y   Q  G+  AA  L+ + Q        T P+G +  A  +E ++TF +MFV   VAT
Sbjct:   55 KKVISEVVATFLLVFVTCGAASIYGEDNARISQLGQSVAGGLIVTVMIYATGHISGAHMNPAVTLSFACFRHFPWIQVPFYWAAQFTGAMCAAFVLKAVLQPIA-VIGTTTPSGPHWHALAIEIVVTFNMMFVTCAVAT 192          
BLAST of FC923193 vs. ExPASy Swiss-Prot
Match: NIP22_MAIZE (Aquaporin NIP2-2 OS=Zea mays GN=NIP2-2 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.390e-21
Identity = 50/139 (35.97%), Postives = 83/139 (59.71%), Query Frame = 3
Query:  291 QKLMAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQVPPYILCQVLGSTLAAGTLRLLFQEKQDQFAGTLPAGSNIQAFVMEFIITFYLMFVISGVAT 707
            +K+++E++ T+ ++F  C +  +   + + +S  G S+  GL+V V++Y+ GHISGAH NP+VT++ A  + FPW QVP Y   Q  G+  AA  L+ +          T P+G +  A ++E ++TF +MFV   VAT
Sbjct:   52 KKVISEVVATFLLVFVTCGAASIYGEDNRRISQLGQSVAGGLIVTVMIYATGHISGAHMNPAVTLSFACFRHFPWIQVPFYWAAQFTGAMCAAFVLKAVLHPIA-VIGTTTPSGPHWHALLIEIVVTFNMMFVTCAVAT 189          
BLAST of FC923193 vs. ExPASy Swiss-Prot
Match: NIP32_ORYSJ (Aquaporin NIP3-2 OS=Oryza sativa subsp. japonica GN=NIP3-2 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.869e-20
Identity = 53/143 (37.06%), Postives = 86/143 (60.14%), Query Frame = 3
Query:  279 VPFMQKLMAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQVPPYILCQVLGSTLAAGTLRLLFQEKQDQFAGTLPAGSNIQAFVMEFIITFYLMFVISGVAT 707
            VP ++K+ AE  GT+ +IF   ++++++  ++ + SL GI+   GL V VLV SL HISG H NP+V+IA       P   + PYI  Q+LGS  A+  ++ ++         T+P    ++AF +EF+ TF L+F+I+ +AT
Sbjct:   91 VPLVKKVGAEFFGTFTLIFTVLSTIIMDEQHKGVESLLGIATSAGLAVTVLVLSLIHISGCHLNPAVSIAMTVFGHLPPAHLLPYIAAQILGSITASFAVKGMYHPVNPGIV-TVPKVGTVEAFFLEFVTTFVLLFIITALAT 232          
BLAST of FC923193 vs. ExPASy Swiss-Prot
Match: AQPZ_BORPA (Aquaporin Z OS=Bordetella parapertussis GN=aqpZ PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.895e-20
Identity = 57/164 (34.76%), Postives = 91/164 (55.49%), Query Frame = 3
Query:  282 PFMQKLMAEILGTYFMIFAGCASVVVNLNNEKI-VSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQVPPYILCQVLGSTLAAGTLRLL------FQEKQDQFAGT-----LPAGSNIQ-AFVMEFIITFYLMFVISGVATITEL*ASFA 734
            P  ++  AE  GT++++  GC S V+     ++ +   G+++ +GL V+ + Y++GHISG HFNP+VT+  A   RF W+ VPPYI+ QV+G+ +AA TL  +      F     +FA        P   ++Q A + E +++   +FVI G AT     A FA
Sbjct:    3 PLFKRCGAEFFGTFWLVLGGCGSAVLAAGVPQVGIGYAGVALAFGLTVLTMAYAVGHISGGHFNPAVTVGLAASGRFGWRDVPPYIVAQVVGAIVAAATLASIAQGVAGFDLVASKFAANGYGDHSPGKYSMQAALICEIVLSAGFVFVILG-ATDKRAPAGFA 165          
BLAST of FC923193 vs. ExPASy Swiss-Prot
Match: AQPZ_BORBR (Aquaporin Z OS=Bordetella bronchiseptica GN=aqpZ PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.895e-20
Identity = 57/164 (34.76%), Postives = 91/164 (55.49%), Query Frame = 3
Query:  282 PFMQKLMAEILGTYFMIFAGCASVVVNLNNEKI-VSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQVPPYILCQVLGSTLAAGTLRLL------FQEKQDQFAGT-----LPAGSNIQ-AFVMEFIITFYLMFVISGVATITEL*ASFA 734
            P  ++  AE  GT++++  GC S V+     ++ +   G+++ +GL V+ + Y++GHISG HFNP+VT+  A   RF W+ VPPYI+ QV+G+ +AA TL  +      F     +FA        P   ++Q A + E +++   +FVI G AT     A FA
Sbjct:    3 PLFKRCGAEFFGTFWLVLGGCGSAVLAAGVPQVGIGYAGVALAFGLTVLTMAYAVGHISGGHFNPAVTVGLAASGRFGWRDVPPYIVAQVVGAIVAAATLASIAQGVAGFDLVASKFAANGYGDHSPGKYSMQAALICEIVLSAGFVFVILG-ATDKRAPAGFA 165          
BLAST of FC923193 vs. ExPASy Swiss-Prot
Match: NIP71_ARATH (Probable aquaporin NIP7-1 OS=Arabidopsis thaliana GN=NIP7-1 PE=2 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 8.349e-20
Identity = 56/135 (41.48%), Postives = 80/135 (59.26%), Query Frame = 3
Query:  297 LMAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQVPPYILCQVLGSTLAAGTLRLLFQEKQDQFAGTLPAGSNIQAFVMEFIITFYLMFVISGV 701
            +MAE++GT+ ++F+ C  +     +   V L   ++  GL V+V+VYS+GHISGAH NPS+TIA A    FPW QVP YI  Q LG+T A      ++    D  A T PA S + AF +E I T  ++F+ S +
Sbjct:   48 VMAELVGTFILMFSVCGVISSTQLSGGHVGLLEYAVTAGLSVVVVVYSIGHISGAHLNPSITIAFAVFGGFPWSQVPLYITAQTLGATAATLVGVSVYGVNADIMA-TKPALSCVSAFFVELIATSIVVFLASAL 181          
BLAST of FC923193 vs. ExPASy Swiss-Prot
Match: AQPZ_PHOLL (Aquaporin Z OS=Photorhabdus luminescens subsp. laumondii GN=aqpZ PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.860e-19
Identity = 57/150 (38.00%), Postives = 85/150 (56.67%), Query Frame = 3
Query:  288 MQKLMAEILGTYFMIFAGCASVVVNLNNEKI-VSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQVPPYILCQVLGSTLAAGTLRLL------FQEKQDQFAGT-----LPAGSNIQ-AFVMEFIITFYLMFVISG 698
            ++KL AE+LGT+ ++F GC SVV      ++ +   G+S+ +GL V+ ++Y++GHISG HFNP+VTI      RF   +V PYI+ QV+G  LAA  L ++      F      FA        P G ++Q A V E ++T   + VI G
Sbjct:    2 LRKLAAELLGTFVLVFGGCGSVVFAAAFPELGIGFVGVSLAFGLTVLTMIYAVGHISGGHFNPAVTIGLWAGGRFRAVEVIPYIISQVIGGILAAAVLYVIASGQVGFDATTSGFASNGFGEHSPGGFSLQSAIVAEIVLTAIFLIVIIG 151          
BLAST of FC923193 vs. ExPASy Swiss-Prot
Match: AQPZ_PSEPK (Aquaporin Z OS=Pseudomonas putida (strain KT2440) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.412e-19
Identity = 52/159 (32.70%), Postives = 90/159 (56.60%), Query Frame = 3
Query:  291 QKLMAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQVPPYILCQVLGSTLAAGTLRLLFQEK----------QDQFAGTLPAGSNIQA-FVMEFIITFYLMFVISGVATITEL*ASFA 734
            +++ AE++GT++++  GC S V+  ++   + + G++  +GL V+ + +++GHISG H NP+V+       RFP K++ PY++ QV+G+ LAAG + L+   K           + +A   P G  + A FV E ++T   + VI G AT     A FA
Sbjct:    5 KRMGAELIGTFWLVLGGCGSAVLAASSPLGIGVLGVAFAFGLTVLTMAFAIGHISGCHLNPAVSFGLVVGGRFPAKELLPYVIAQVIGAILAAGVIYLIASGKAGFELSAGLASNGYADHSPGGYTLGAGFVSEVVMTAMFLVVIMG-ATDARAPAGFA 162          
The following BLAST results are available for this feature:
BLAST of FC923193 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
NIP21_MAIZE4.004e-2236.73Aquaporin NIP2-1 OS=Zea mays GN=NIP2-1 PE=2 SV=2[more]
AQPZ_RHOPA6.830e-2238.78Aquaporin Z OS=Rhodopseudomonas palustris GN=aqpZ ... [more]
NIP23_MAIZE2.595e-2136.69Aquaporin NIP2-3 OS=Zea mays GN=NIP2-3 PE=2 SV=1[more]
NIP22_MAIZE3.390e-2135.97Aquaporin NIP2-2 OS=Zea mays GN=NIP2-2 PE=2 SV=1[more]
NIP32_ORYSJ2.869e-2037.06Aquaporin NIP3-2 OS=Oryza sativa subsp. japonica G... [more]
AQPZ_BORPA4.895e-2034.76Aquaporin Z OS=Bordetella parapertussis GN=aqpZ PE... [more]
AQPZ_BORBR4.895e-2034.76Aquaporin Z OS=Bordetella bronchiseptica GN=aqpZ P... [more]
NIP71_ARATH8.349e-2041.48Probable aquaporin NIP7-1 OS=Arabidopsis thaliana ... [more]
AQPZ_PHOLL1.860e-1938.00Aquaporin Z OS=Photorhabdus luminescens subsp. lau... [more]
AQPZ_PSEPK5.412e-1932.70Aquaporin Z OS=Pseudomonas putida (strain KT2440) ... [more]

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Properties
Property NameValue
Genbank descriptionC31702A12EF StrClemenN Citrus clementina cDNA clone C31702A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923193 ID=FC923193; Name=FC923193; organism=Citrus clementina; type=EST; length=741bp
GAAATTGCATGTGATTTCAGAAGGACACCAAATAAAACTCACTCCACCTC
CCGGCCCCAAGTAAAGAGAAATCACTGTGCCTTTGTCTGTCCACTTTGCT
CTCCGATCACTGTGCCTTGATCCTATATAGATAGATCATGGCCGATAATT
CAGGGACAGGGGGCAATGGAGTTTGTGTAACATTCAAAGATTGTGAAGAT
GCCATTCAGAATTGCCCTTCCTCTGCTCCTCCTCCTCCTCCTCCTTCATG
CGACACAAAGGACTCCGTATATTTTTCAGTACCCTTCATGCAAAAGTTGA
TGGCGGAGATTTTGGGGACATATTTTATGATATTCGCGGGATGTGCATCG
GTGGTGGTGAATCTGAACAATGAAAAGATAGTGTCGCTTCCAGGAATATC
AATTGTGTGGGGACTTGTTGTGATGGTGCTTGTTTACTCCCTCGGTCACA
TCTCCGGCGCCCATTTCAATCCTTCTGTCACCATTGCTCATGCCACCTGC
AAACGTTTTCCCTGGAAACAGGTTCCGCCTTATATACTATGCCAAGTTCT
GGGATCAACGTTGGCTGCGGGAACACTTCGGTTACTGTTTCAAGAAAAAC
AGGATCAGTTCGCAGGAACACTTCCAGCTGGCTCCAATATTCAGGCGTTT
GTGATGGAGTTCATTATCACCTTCTACCTCATGTTTGTCATATCCGGTGT
CGCCACGATAACAGAGCTATAGGCGAGCTTTGCAGTCTCGC
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