FC923193

Overview
NameFC923193
Unique NameFC923193
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length741
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923193 vs. ExPASy Swiss-Prot
Match: AQPZ_PSEAE (Aquaporin Z OS=Pseudomonas aeruginosa GN=aqpZ PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.248e-15
Identity = 50/152 (32.89%), Postives = 82/152 (53.95%), Query Frame = 3
Query:  288 MQKLMAEILGTYFMIFAGCASVVVNLNNEKI-VSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQVPPYILCQVLGSTLAAGTLRLLFQEKQ--DQFAGTL--------PAGSNIQ-AFVMEFIITFYLMFVISGVAT 707
            M++  AE  GT++++  GC S V+     ++ +   G+++ +GL V+ + Y++G ISGAH NP+V++      RFP  Q+ PY++ QVLG   A G L L+   K   D  AG          P G ++Q A V E ++T   + +I G  +
Sbjct:    1 MKQYGAEFFGTFWLVLGGCGSAVLAAGVPELGIGYLGVALAFGLSVLTMAYAIGPISGAHLNPAVSVGLWVGGRFPASQLLPYVVAQVLGGLAAGGVLYLIASGKAGFDLAAGFASNGYGEHSPGGYSLQAALVSEVVLTGMFLLIILGATS 152          
BLAST of FC923193 vs. ExPASy Swiss-Prot
Match: AQP7_MACFA (Aquaporin-7 OS=Macaca fascicularis GN=AQP7 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.779e-15
Identity = 44/110 (40.00%), Postives = 65/110 (59.09%), Query Frame = 3
Query:  288 MQKLMAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQVPPYILCQVLGSTLAAGTLRLLFQEKQDQFAG 617
            +++ +AE + TY M+  G  SV   + N+K  S  G+++ +G  V + V+  GHISGAH N +VT A+    R PW++ P Y+L Q LGS LAA T+  LF      F+G
Sbjct:   34 VREFLAEFMSTYVMMVFGLGSVAHMVLNKKYGSYLGVNLGFGFGVTMGVHVAGHISGAHMNAAVTFANCALGRVPWRKFPVYVLGQFLGSFLAAATIYTLFYTAILHFSG 143          
BLAST of FC923193 vs. ExPASy Swiss-Prot
Match: AQPM_ARCFU (Probable aquaporin aqpM OS=Archaeoglobus fulgidus GN=aqpM PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.353e-14
Identity = 58/164 (35.37%), Postives = 83/164 (50.61%), Query Frame = 3
Query:  291 QKLMAEILGTYFMIFAGCASVVVNLN-----------NEKIVSLPG------ISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQVPPYILCQVLGSTLAAGTLRLLFQEKQDQFAGTL---------PAGSNIQAFVMEFIITFYLMFVISGVA 704
            ++  AE++GT+ ++F G  + V+ L            N  I +L G      I + + L +  ++YSLG ISGAH NP+VTIA  +  RFP ++V PYI+ Q +G+ L +    LLF       A T+         P     QA + E I TF LM VI GVA
Sbjct:    7 KRFTAEVVGTFILVFFGPGAAVITLMIANGADKPNEFNIGIGALGGLGDWFAIGMAFALAIAAVIYSLGRISGAHINPAVTIALWSIGRFPGREVVPYIVAQFIGAALGS----LLFLACVGPAAATVGGLGATAPFPGIGYGQAILTEAIGTFLLMLVIMGVA 166          
BLAST of FC923193 vs. ExPASy Swiss-Prot
Match: AQP7_HUMAN (Aquaporin-7 OS=Homo sapiens GN=AQP7 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.073e-14
Identity = 43/110 (39.09%), Postives = 64/110 (58.18%), Query Frame = 3
Query:  288 MQKLMAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQVPPYILCQVLGSTLAAGTLRLLFQEKQDQFAG 617
            +++ +AE + TY M+  G  SV   + N+K  S  G+++ +G  V + V+  G ISGAH N +VT A+    R PW++ P Y+L Q LGS LAA T+  LF      F+G
Sbjct:   34 VREFLAEFMSTYVMMVFGLGSVAHMVLNKKYGSYLGVNLGFGFGVTMGVHVAGRISGAHMNAAVTFANCALGRVPWRKFPVYVLGQFLGSFLAAATIYSLFYTAILHFSG 143          
BLAST of FC923193 vs. ExPASy Swiss-Prot
Match: NIP41_ORYSJ (Aquaporin NIP4-1 OS=Oryza sativa subsp. japonica GN=NIP4-1 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.013e-14
Identity = 47/144 (32.64%), Postives = 82/144 (56.94%), Query Frame = 3
Query:  288 MQKLMAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFP-WKQVPPYILCQVLGSTLAAGTLRLLFQEKQDQFAGTLPA---GSNIQAFVMEFIITFYLMFVISGVAT 707
            ++++M E L ++ ++F  C + ++       ++ P + +V   V M + + L  +  AHFNP+VTI  A  +RFP W ++P Y+  Q+ GS LA  ++  + + + D F GT P    G+ +  F+MEF+ +  LM VI+ VAT
Sbjct:   56 IREVMVEGLASFLVVFWSCVAALMQ-EMYGTLTFPMVCLV---VAMTVAFVLSWLGPAHFNPAVTITFAAYRRFPVWPKLPLYVAAQLAGSLLACLSVNAVMRPRHDHFYGTAPVVVHGTRL-PFLMEFLASAVLMIVIATVAT 194          
BLAST of FC923193 vs. ExPASy Swiss-Prot
Match: AQPM_METTH (Aquaporin aqpM OS=Methanobacterium thermoautotrophicum GN=aqpM PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.992e-13
Identity = 52/168 (30.95%), Postives = 81/168 (48.21%), Query Frame = 3
Query:  279 VPFMQKLMAEILGTYFMIFAGCASVVVNLN-----------NEKIVSLPG------ISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQVPPYILCQVLGSTLAAGTLRLLFQEKQDQFAGTL---------PAGSNIQAFVMEFIITFYLMFVISGVA 704
            V   ++ +AE +GT+F++F G  +  + L            N  I  L G      I + +G  +   +Y+LG+ISG H NP+VTI   + K+FP + V PYI+ Q+LG+  A+     +F +     A T+         P     QA + E + TF LM  I G+A
Sbjct:    2 VSLTKRCIAEFIGTFFLVFFGAGAAAITLMIASGGTAPNPFNIGIGLLGGLGDWVAIGLAFGFAIAASIYALGNISGCHINPAVTIGLWSVKKFPGRDVVPYIIAQLLGAAFAS----FIFLQCAGITAATIGGLGATAPFPGIGYWQAMLAETVGTFLLMITIMGIA 165          
BLAST of FC923193 vs. ExPASy Swiss-Prot
Match: AQPM_METTM (Aquaporin aqpM OS=Methanobacterium thermoautotrophicum (strain Marburg / DSM 2133) GN=aqpM PE=1 SV=3)

HSP 1 Score: 75.8702 bits (185), Expect = 2.601e-13
Identity = 53/168 (31.55%), Postives = 81/168 (48.21%), Query Frame = 3
Query:  279 VPFMQKLMAEILGTYFMIFAGCASVVVNLN-----------NEKIVSLPG------ISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQVPPYILCQVLGSTLAAGTLRLLFQEKQDQFAGTL---------PAGSNIQAFVMEFIITFYLMFVISGVA 704
            V   ++ +AE +GT+ ++F G  S  V L            N  I  L G      I + +G  +   +Y+LG+ISG H NP+VTI   + K+FP ++V PYI+ Q+LG+   +     +F +     A T+         P  S  QA + E + TF LM  I G+A
Sbjct:    2 VSLTKRCIAEFIGTFILVFFGAGSAAVTLMIASGGTSPNPFNIGIGLLGGLGDWVAIGLAFGFAIAASIYALGNISGCHINPAVTIGLWSVKKFPGREVVPYIIAQLLGAAFGS----FIFLQCAGIGAATVGGLGATAPFPGISYWQAMLAEVVGTFLLMITIMGIA 165          
BLAST of FC923193 vs. ExPASy Swiss-Prot
Match: AQP7_RAT (Aquaporin-7 OS=Rattus norvegicus GN=Aqp7 PE=2 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 3.397e-13
Identity = 40/111 (36.04%), Postives = 64/111 (57.66%), Query Frame = 3
Query:  285 FMQKLMAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQVPPYILCQVLGSTLAAGTLRLLFQEKQDQFAG 617
            ++++ +AE L TY ++  G  SV   +  E++ S  G+++ +G  V + ++  G ISGAH N +VT  +    R  WK+ P Y+L Q LGS LAA T  L+F    + +AG
Sbjct:   17 WVREFLAEFLSTYVLMVFGLGSVAHMVLGERLGSYLGVNLGFGFGVTMGIHVAGGISGAHMNAAVTFTNCALGRMAWKKFPIYVLGQFLGSFLAAATTYLIFYGAINHYAG 127          
BLAST of FC923193 vs. ExPASy Swiss-Prot
Match: AQP_HAEIX (Aquaporin OS=Haematobia irritans exigua PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.795e-13
Identity = 47/145 (32.41%), Postives = 75/145 (51.72%), Query Frame = 3
Query:  291 QKLMAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQVPPYILCQVLGSTLAAGTLRLLFQEK-------QDQFAGTLPAGSNIQAFVMEFIITFYLMFVISGVA 704
            ++LMAE++GT+F++  G  S      +E   S+P I+  +GL V  L  ++GHISG H NP+VT+           +   YI  Q +G+   A  +++   E           F+ TL  G   QA ++E +ITF L+ V+ GV+
Sbjct:   24 RQLMAELIGTFFLVVIGVGSCTGG--SEWSPSIPQIAFTFGLTVATLAQAIGHISGCHINPAVTVGFLIVGEMSIIKSVLYIAVQCVGAIAGAAVIKVGVSEAVSGLDLGVSSFSSTLTVG---QAVLIEALITFILVVVVKGVS 163          
BLAST of FC923193 vs. ExPASy Swiss-Prot
Match: AQP7_MOUSE (Aquaporin-7 OS=Mus musculus GN=Aqp7 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.795e-13
Identity = 47/133 (35.34%), Postives = 68/133 (51.13%), Query Frame = 3
Query:  288 MQKLMAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQVPPYILCQVLGSTLAAGTLRLLFQEKQDQFAG--TLPAGSNIQAFVMEFIITFYL 680
            +++ +AE L TY M+  G  SV   +  E   S  G+++ +G  V + V+  G ISGAH N +VT  +    R  WK+ P Y+L Q LGS  AA T  L+F    + FAG   L  GS   A +    +  Y+
Sbjct:   19 VREFLAEFLSTYVMMVFGLGSVAHMVLGENSGSYLGVNLGFGFGVTMGVHVAGGISGAHMNAAVTFTNCALGRMTWKKFPVYVLGQFLGSFSAAATTYLIFYGAINHFAGGDLLVTGSKATANIFATYLPEYM 151          
The following BLAST results are available for this feature:
BLAST of FC923193 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
AQPZ_PSEAE1.248e-1532.89Aquaporin Z OS=Pseudomonas aeruginosa GN=aqpZ PE=3... [more]
AQP7_MACFA2.779e-1540.00Aquaporin-7 OS=Macaca fascicularis GN=AQP7 PE=2 SV... [more]
AQPM_ARCFU2.353e-1435.37Probable aquaporin aqpM OS=Archaeoglobus fulgidus ... [more]
AQP7_HUMAN3.073e-1439.09Aquaporin-7 OS=Homo sapiens GN=AQP7 PE=2 SV=1[more]
NIP41_ORYSJ4.013e-1432.64Aquaporin NIP4-1 OS=Oryza sativa subsp. japonica G... [more]
AQPM_METTH1.992e-1330.95Aquaporin aqpM OS=Methanobacterium thermoautotroph... [more]
AQPM_METTM2.601e-1331.55Aquaporin aqpM OS=Methanobacterium thermoautotroph... [more]
AQP7_RAT3.397e-1336.04Aquaporin-7 OS=Rattus norvegicus GN=Aqp7 PE=2 SV=2[more]
AQP_HAEIX5.795e-1332.41Aquaporin OS=Haematobia irritans exigua PE=2 SV=1[more]
AQP7_MOUSE5.795e-1335.34Aquaporin-7 OS=Mus musculus GN=Aqp7 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC31702A12EF StrClemenN Citrus clementina cDNA clone C31702A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923193 ID=FC923193; Name=FC923193; organism=Citrus clementina; type=EST; length=741bp
GAAATTGCATGTGATTTCAGAAGGACACCAAATAAAACTCACTCCACCTC
CCGGCCCCAAGTAAAGAGAAATCACTGTGCCTTTGTCTGTCCACTTTGCT
CTCCGATCACTGTGCCTTGATCCTATATAGATAGATCATGGCCGATAATT
CAGGGACAGGGGGCAATGGAGTTTGTGTAACATTCAAAGATTGTGAAGAT
GCCATTCAGAATTGCCCTTCCTCTGCTCCTCCTCCTCCTCCTCCTTCATG
CGACACAAAGGACTCCGTATATTTTTCAGTACCCTTCATGCAAAAGTTGA
TGGCGGAGATTTTGGGGACATATTTTATGATATTCGCGGGATGTGCATCG
GTGGTGGTGAATCTGAACAATGAAAAGATAGTGTCGCTTCCAGGAATATC
AATTGTGTGGGGACTTGTTGTGATGGTGCTTGTTTACTCCCTCGGTCACA
TCTCCGGCGCCCATTTCAATCCTTCTGTCACCATTGCTCATGCCACCTGC
AAACGTTTTCCCTGGAAACAGGTTCCGCCTTATATACTATGCCAAGTTCT
GGGATCAACGTTGGCTGCGGGAACACTTCGGTTACTGTTTCAAGAAAAAC
AGGATCAGTTCGCAGGAACACTTCCAGCTGGCTCCAATATTCAGGCGTTT
GTGATGGAGTTCATTATCACCTTCTACCTCATGTTTGTCATATCCGGTGT
CGCCACGATAACAGAGCTATAGGCGAGCTTTGCAGTCTCGC
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