FC923193

Overview
NameFC923193
Unique NameFC923193
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length741
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923193 vs. ExPASy Swiss-Prot
Match: AQP73_HUMAN (Putative aquaporin-7-like protein 3 OS=Homo sapiens GN=AQP7P3 PE=5 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 9.885e-13
Identity = 40/109 (36.70%), Postives = 61/109 (55.96%), Query Frame = 3
Query:  291 QKLMAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQVPPYILCQVLGSTLAAGTLRLLFQEKQDQFAG 617
            ++ +AE + TY M+  G  SV   L N+   S  G+++ +G  V + V+  G  SGAH N +V++ +    R PW++ P Y+L Q LGS LAA T+  LF      F+G
Sbjct:   35 REFLAEFMSTYVMMVFGLGSVAHMLLNKTFGSYLGVNLGFGFGVTMGVHMAGRTSGAHMNAAVSLTNCALGRVPWRKFPVYVLGQFLGSFLAAATIYSLFYTAILHFSG 143          
BLAST of FC923193 vs. ExPASy Swiss-Prot
Match: GLPF_BACSU (Glycerol uptake facilitator protein OS=Bacillus subtilis GN=glpF PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.202e-12
Identity = 41/98 (41.84%), Postives = 57/98 (58.16%), Query Frame = 3
Query:  288 MQKLMAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIV----WGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQVPPYILCQVLGSTLAA 569
            M     E++GT  +I  G A V   +N +K +S     IV    WGL V +  Y++G ISGAH NP++TIA A    FPWK+VP YI  Q++G+ + A
Sbjct:    1 MTAFWGEVIGTMLLIIFG-AGVCAGVNLKKSLSFQSGWIVVVFGWGLGVAMAAYAVGGISGAHLNPALTIALAFVGDFPWKEVPVYIAAQMIGAIIGA 97          
BLAST of FC923193 vs. ExPASy Swiss-Prot
Match: GLPF_THEMA (Probable glycerol uptake facilitator protein OS=Thermotoga maritima GN=glpF PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.876e-12
Identity = 41/97 (42.27%), Postives = 55/97 (56.70%), Query Frame = 3
Query:  288 MQKLMAEILGTYFMIFAG---CASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQVPPYILCQVLGSTLAA 569
            M   +AE LGT  +I  G    A+VV+  +         I+  WGL V + VY +G ISGAH NP+VTI  A   +FPW +VP YI  Q+LG+ + A
Sbjct:    1 MSVYLAEFLGTMLLIILGDGVVANVVLKKSKGHNSGWIVITTGWGLAVAMSVYLVGRISGAHINPAVTIGLAFIGQFPWSKVPGYIFSQILGAFVGA 97          
BLAST of FC923193 vs. ExPASy Swiss-Prot
Match: AQP_DROME (Aquaporin OS=Drosophila melanogaster GN=Drip PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 6.407e-12
Identity = 42/139 (30.22%), Postives = 69/139 (49.64%), Query Frame = 3
Query:  297 LMAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQVPPYILCQVLGSTLAAGTLRLLFQEKQDQFAGTL---PAGSNIQAFVMEFIITFYLMFVISGVA 704
            L+ E++GT+F+IF G  S           S+P I+  +GL V  +   LGH+SG H NP+VT+           +   YI+ Q +G+   A  +++          G     P+ +  QA ++E +ITF L+FV+  V+
Sbjct:   26 LLGELVGTFFLIFVGVGSTTSG-------SVPQIAFTFGLTVATIAQGLGHLSGCHINPAVTLGFLIVGEISILKAAFYIIVQCVGAIAGAAVIKVALDGVAGGDLGVSSFDPSLNCAQAVLIEALITFILVFVVKAVS 157          
BLAST of FC923193 vs. ExPASy Swiss-Prot
Match: YFF4_YEAST (Uncharacterized membrane protein YFL054C OS=Saccharomyces cerevisiae GN=YFL054C PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.368e-12
Identity = 38/111 (34.23%), Postives = 57/111 (51.35%), Query Frame = 3
Query:  288 MQKLMAEILGTYFMIFAGCA-SVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQVPPYILCQVLGSTLAAGTLRLLFQEKQDQFAG 617
            M++  AE LGT  ++  G   ++   +      S   +S  WG   M+ VY  G ISG H NP+VTI+ A  ++FPWK+VP YI+ Q++G+          F     +F G
Sbjct:  347 MREPFAEFLGTLVLVIFGVGGNLQATVTKGSGGSYESLSFAWGFGCMLGVYVAGGISGGHINPAVTISMAIFRKFPWKKVPVYIVAQIIGAYFGGAMAYGYFWSSITEFEG 457          
BLAST of FC923193 vs. ExPASy Swiss-Prot
Match: GLPF_HAEIN (Glycerol uptake facilitator protein OS=Haemophilus influenzae GN=glpF PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.368e-12
Identity = 53/152 (34.87%), Postives = 74/152 (48.68%), Query Frame = 3
Query:  300 MAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQVPPYILCQVLGSTLAAGTLRLLFQ----------------EKQDQFAGTL-----PAGSNIQAFVMEFIITFYLMFVI 692
            + E LGT  +IF G   V           L  ISI+WG+ V + VY+   +SGAH NP+VTIA      F  K+V PYI+ Q+LG+  AA  +  L++                ++    AGT      P+ S   AF +EF+IT  LM +I
Sbjct:   10 IGEFLGTALLIFFGVGCVAALKVAGASFGLWEISIMWGMGVALAVYATAGLSGAHLNPAVTIALWKFACFDGKKVIPYIISQMLGAFFAAALVYALYRNVFIDYETVHNIVRGTQESLSLAGTFSTYPHPSLSIGGAFAVEFVITAILMALI 161          
BLAST of FC923193 vs. ExPASy Swiss-Prot
Match: AQP3_RAT (Aquaporin-3 OS=Rattus norvegicus GN=Aqp3 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.427e-11
Identity = 40/111 (36.04%), Postives = 60/111 (54.05%), Query Frame = 3
Query:  288 MQKLMAEILGTYFMIFAGCASVV-VNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQVPPYILCQVLGSTLAAGTLRLLFQEKQDQFAG 617
            +++ +AE LGT  ++  GC SV  V L+         I++ +G  V + +   G +SGAH NP+VT A     R PW ++P Y L Q LG+ L AG +  L+ +    FAG
Sbjct:   22 LRQALAECLGTLILVMFGCGSVAQVVLSRGTHGGFLTINLAFGFAVTLAILVAGQVSGAHLNPAVTFAMCFLAREPWIKLPIYTLAQTLGAFLGAGIVFGLYYDAIWAFAG 132          
BLAST of FC923193 vs. ExPASy Swiss-Prot
Match: AQPB_DICDI (Aquaporin B OS=Dictyostelium discoideum GN=wacA PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.424e-11
Identity = 44/149 (29.53%), Postives = 77/149 (51.68%), Query Frame = 3
Query:  285 FMQKLMAEILGTYFMIFAGCASVVVN--LNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQVPPYILCQVLGSTLAAGTLRLLFQE--KQDQFAGTLPAGSNI-QAFVMEFIITFYLMFVISGVATITE 716
            F ++L+AE  GT F+++    S +      ++ IV +  I +V G     +++S+  ISG   NP+VT+   T  R        +I+ Q +G+ + AG ++       ++D  A TL  G N+ + F +E + T +L+FV+ GVA   E
Sbjct:   30 FTRQLLAEFFGTLFVVYIVSGSTLAANFAVSDPIVRVCLICLVQGFAFAAIIWSISGISGCQLNPAVTVGCVTTGRMGILNGIAFIIFQCVGALVGAGMMKASLPTFYERDLSATTLATGVNVARGFFLEMVTTSFLVFVVLGVAVYNE 178          
BLAST of FC923193 vs. ExPASy Swiss-Prot
Match: AQP4_MOUSE (Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 5.424e-11
Identity = 45/141 (31.91%), Postives = 67/141 (47.52%), Query Frame = 3
Query:  285 FMQKLMAEILGTYFMIFAGCASVVV--NLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQVPPYILCQVLGSTLAAGTLRLLFQEKQDQFAGTLPAGSNIQA---FVMEFIITFYLMFVI 692
            F + + AE L T   +  G  S +      N   V +  IS+ +GL +  +V   GHISG H NP+VT+A    ++    +   YI+ Q LG+ + AG L L+         G      N+ A    ++E IITF L+F I
Sbjct:   34 FWKAVSAEFLATLIFVLLGVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIIAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTI 174          
BLAST of FC923193 vs. ExPASy Swiss-Prot
Match: GLPF_PSEAE (Glycerol uptake facilitator protein OS=Pseudomonas aeruginosa GN=glpF PE=3 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 9.252e-11
Identity = 52/152 (34.21%), Postives = 74/152 (48.68%), Query Frame = 3
Query:  300 MAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQVPPYILCQVLGSTLAA-------GTLRLLFQEKQDQFAGTL--------------PAGSNIQAFVMEFIITFYLMFVI 692
            +AE LGT  +IF G   V           L  ISI+WG+ V + +Y    +SGAH NP+V+IA      F  +++P YI  QV G+  AA        +L + F++ Q+   G+               PA S  QAF++E +IT  LM VI
Sbjct:   15 LAEFLGTALLIFFGTGCVAALKVAGASFGLWEISIIWGVGVSMAIYLSAGVSGAHLNPAVSIALWLFAGFEGRKLPFYITAQVAGAFCAAALVYTLYSSLFIEFEQAQNIVRGSQDSLALASVFSTYPHPALSVGQAFLVEVVITAILMAVI 166          
The following BLAST results are available for this feature:
BLAST of FC923193 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
AQP73_HUMAN9.885e-1336.70Putative aquaporin-7-like protein 3 OS=Homo sapien... [more]
GLPF_BACSU2.202e-1241.84Glycerol uptake facilitator protein OS=Bacillus su... [more]
GLPF_THEMA2.876e-1242.27Probable glycerol uptake facilitator protein OS=Th... [more]
AQP_DROME6.407e-1230.22Aquaporin OS=Drosophila melanogaster GN=Drip PE=1 ... [more]
YFF4_YEAST8.368e-1234.23Uncharacterized membrane protein YFL054C OS=Saccha... [more]
GLPF_HAEIN8.368e-1234.87Glycerol uptake facilitator protein OS=Haemophilus... [more]
AQP3_RAT1.427e-1136.04Aquaporin-3 OS=Rattus norvegicus GN=Aqp3 PE=2 SV=1[more]
AQPB_DICDI5.424e-1129.53Aquaporin B OS=Dictyostelium discoideum GN=wacA PE... [more]
AQP4_MOUSE5.424e-1131.91Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2[more]
GLPF_PSEAE9.252e-1134.21Glycerol uptake facilitator protein OS=Pseudomonas... [more]

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Properties
Property NameValue
Genbank descriptionC31702A12EF StrClemenN Citrus clementina cDNA clone C31702A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923193 ID=FC923193; Name=FC923193; organism=Citrus clementina; type=EST; length=741bp
GAAATTGCATGTGATTTCAGAAGGACACCAAATAAAACTCACTCCACCTC
CCGGCCCCAAGTAAAGAGAAATCACTGTGCCTTTGTCTGTCCACTTTGCT
CTCCGATCACTGTGCCTTGATCCTATATAGATAGATCATGGCCGATAATT
CAGGGACAGGGGGCAATGGAGTTTGTGTAACATTCAAAGATTGTGAAGAT
GCCATTCAGAATTGCCCTTCCTCTGCTCCTCCTCCTCCTCCTCCTTCATG
CGACACAAAGGACTCCGTATATTTTTCAGTACCCTTCATGCAAAAGTTGA
TGGCGGAGATTTTGGGGACATATTTTATGATATTCGCGGGATGTGCATCG
GTGGTGGTGAATCTGAACAATGAAAAGATAGTGTCGCTTCCAGGAATATC
AATTGTGTGGGGACTTGTTGTGATGGTGCTTGTTTACTCCCTCGGTCACA
TCTCCGGCGCCCATTTCAATCCTTCTGTCACCATTGCTCATGCCACCTGC
AAACGTTTTCCCTGGAAACAGGTTCCGCCTTATATACTATGCCAAGTTCT
GGGATCAACGTTGGCTGCGGGAACACTTCGGTTACTGTTTCAAGAAAAAC
AGGATCAGTTCGCAGGAACACTTCCAGCTGGCTCCAATATTCAGGCGTTT
GTGATGGAGTTCATTATCACCTTCTACCTCATGTTTGTCATATCCGGTGT
CGCCACGATAACAGAGCTATAGGCGAGCTTTGCAGTCTCGC
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