FC923196
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923196 vs. ExPASy Swiss-Prot
Match: PSD_HELPS (Phosphatidylserine decarboxylase proenzyme OS=Helicobacter pylori (strain Shi470) GN=psd PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.294e-13 Identity = 70/221 (31.67%), Postives = 101/221 (45.70%), Query Frame = 1 Query: 10 FVNFFKDQINLADVKYPLEHFKTFNEFFIRELKPGARPIDCMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGN-DICSNSFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKVAFVAIGATMVGSITF------------------LKNTGDFVKKGDEFGYFSFGGSTVICV 615 +V FK I+L++ + PLE++K+ N F R LK RP D +A C A AF + +L+ IKG + L+G + S SF V F L+P+DYH +H P I + G L VN +++ K N+F N+RV + ++ FVA+GA VG + F N VKKGD G F G + V+ V Sbjct: 32 YVKIFK--IDLSEFE-PLENYKSLNALFTRSLKK-ERPFDKTPNACIAPCDALITECAFLDNDSALQ--IKGMPYKAHELVGEINPLSPSFF---YVNFYLSPKDYHHYHAPCDLEILEARCFAGKLLPVNKPSLH-KNKNLFVGNERVALVAKDIQGNRLYFVAVGALNVGKMRFNFDKNIQTNAKAHLTQAYSYNPPIKVKKGDNLGNFEMGSTIVLFV 242
BLAST of FC923196 vs. ExPASy Swiss-Prot
Match: PSD_HELP2 (Phosphatidylserine decarboxylase proenzyme OS=Helicobacter pylori (strain P12) GN=psd PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 5.609e-13 Identity = 71/231 (30.74%), Postives = 100/231 (43.29%), Query Frame = 1 Query: 7 KFVNFFKDQINLADVKY---------PLEHFKTFNEFFIRELKPGARPIDCMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGN-DICSNSFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKVAFVAIGATMVGSI------------------TFLKNTGDFVKKGDEFGYFSFGGSTVICV 615 KF +F + IN K PLE++K+ N F R LK RP D +A C A AF + +L+ IKG + L+G + S SF V F L+P+DYH +H P I + G L VN +++ K N+F N+RV + ++ FVA+GA VG + T+ N VKKGD G F G + V+ V Sbjct: 19 KFPSFIQKGINALYAKIFKVDLSEFEPLENYKSLNALFTRSLKK-ERPFDKAPNICIAPCDALITECAFLDNDSALQ--IKGMPYKAHELVGEINPLSPSFF---YVNFYLSPKDYHHYHAPCDLEILETRYFAGKLLPVNKPSLH-KNKNLFVGNERVALVTKDIQGNRLYFVAVGALNVGKMRFNFDKNIQTNAKARFTQTYSYNPPIKVKKGDNLGNFEMGSTIVLFV 242
BLAST of FC923196 vs. ExPASy Swiss-Prot
Match: PSD_HELPY (Phosphatidylserine decarboxylase proenzyme OS=Helicobacter pylori GN=psd PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 9.567e-13 Identity = 69/231 (29.87%), Postives = 100/231 (43.29%), Query Frame = 1 Query: 7 KFVNFFKDQINLADVKY---------PLEHFKTFNEFFIRELKPGARPIDCMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGN-DICSNSFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKVAFVAIGATMVGSI------------------TFLKNTGDFVKKGDEFGYFSFGGSTVICV 615 KF +F + IN VK PLE++++ N F R LK RP D +A C A AF + +L+ IKG + L+G + S SF F L+P+DYH +H P I + G L VN +++ K N+F N+RV + ++ FVA+GA VG + T+ N VKKGD G F G + V+ + Sbjct: 19 KFPSFIQKGINALYVKIFKIDLSEFEPLENYRSLNALFTRSLKK-ERPFDKSPNICIAPCDALITECAFLDNDSALQ--IKGMPYKAHELVGEINPLSPSFFYAN---FYLSPKDYHHYHAPCDLEILEARYFAGKLLPVNKPSLH-KNNNLFVGNERVTLVAKDIQGNRLYFVAVGALNVGKMRFNFDKNIQTNAKARFTQTYSYNPPIKVKKGDNLGNFEMGSTIVLFI 242
BLAST of FC923196 vs. ExPASy Swiss-Prot
Match: PSD_HELPH (Phosphatidylserine decarboxylase proenzyme OS=Helicobacter pylori (strain HPAG1) GN=psd PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.249e-12 Identity = 67/221 (30.32%), Postives = 101/221 (45.70%), Query Frame = 1 Query: 10 FVNFFKDQINLADVKYPLEHFKTFNEFFIRELKPGARPIDCMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGN-DICSNSFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKVAFVAIGATMVGSI------------------TFLKNTGDFVKKGDEFGYFSFGGSTVICV 615 +V FK I+L++ + PLE++K+ N F R LK RP D +A C A AF + +L+ IKG + L+G + + SF F L+P+DYH +H P I + G L VN +++ K N+F N+RV + ++ FVA+GA VG + T+ N VKKGD G F G + V+ + Sbjct: 32 YVKIFK--IDLSEFE-PLENYKSLNALFTRSLKK-ERPFDKAPNICIAPCDALITECAFLDNDSALQ--IKGMPYKAHELVGEINPLNPSFFYAN---FYLSPKDYHHYHAPCDLEILEARYFAGKLLPVNKPSLH-KNNNLFVGNERVTLVAKDVQGNRLYFVAVGALNVGKMRFNFDKNIQTNAKARFTQTYSYNPPIKVKKGDNLGNFEMGSTIVLFI 242
BLAST of FC923196 vs. ExPASy Swiss-Prot
Match: PISD_BOVIN (Phosphatidylserine decarboxylase proenzyme OS=Bos taurus GN=PISD PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.249e-12 Identity = 64/233 (27.47%), Postives = 99/233 (42.49%), Query Frame = 1 Query: 61 LEHFKTFNEFFIRELKPGARPIDCMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDICS-----------NSFLNGTMV---------IFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKVAFVAIGATMVGSI--------------------------TFLKNTGDFVKKGDEFGYFSFGGSTVICVFE 621 L H++ +EFF R+LKP ARP+ + + +D +++ F V++ +KG +S++ LG S +SF + + + LAP DYH FH P + PG L +VNP + +F N+RVV H G + A+GAT VGSI T G ++KG+ G F+ GST++ +FE Sbjct: 166 LHHYRNLSEFFRRKLKPQARPVCGLHS---VISPSDGKILNFGQVKNCEVEQVKGVTYSLESFLGPRTPSEDLPFPPATPHSSFRSQLVTREGNELYHCVIYLAPGDYHCFHSPTDWTVSHRRHFPGSLMSVNP-GMARWIKELFCHNERVVLTGDWKH-GFFSLTAVGATNVGSIRIYFDRDLHTNSPRYSKGSYNDFSFVTHANKEGIPMRKGEHLGEFNL-GSTIVLIFE 392
BLAST of FC923196 vs. ExPASy Swiss-Prot
Match: PSD_CAMJE (Phosphatidylserine decarboxylase proenzyme OS=Campylobacter jejuni GN=psd PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.856e-11 Identity = 64/227 (28.19%), Postives = 106/227 (46.70%), Query Frame = 1 Query: 10 FVNFFKDQINLADVKYPLEHFKTFNEFFIRELKPGARPIDCMEREEVAVCAADSRLM----AFKSVEDSLRFWIKGQKFSIQGLLGNDICSNSFLNGT-MVIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKVAFVAIGATMVGSITF---------LKNTGDFV--------KKGDEFGYFSFGGSTVICVFEK 624 +V +F IN+++ K P E +++ N F R L+ + EE + +D +++ F + E+ F IKG +S++ LL + + NG V L+P+DYHR+H P I G LY+VN + + N++ +N+R VS+ G V +GA VG + F K + +F KKG+E G F GST++ + +K Sbjct: 31 YVKYFN--INMSEFKAPCE-YESLNALFTRTLQIPRK------FEEGFISPSDGKILECGSTFLANEEHFAFSIKGHAYSVEELLKDSFEKDELKNGLDYVNIYLSPKDYHRYHSPCDMQILSATYTSGVLYSVNEKHL-ERISNLYVKNER-VSLKCQNEKGIFWLVFVGAQNVGKMRFNFDASIQTNAKISHNFTRKYENLNFKKGEELGNFEL-GSTIVLISQK 245 The following BLAST results are available for this feature:
BLAST of FC923196 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 266
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923196 ID=FC923196; Name=FC923196; organism=Citrus clementina; type=EST; length=627bpback to top |