FC923196
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923196 vs. ExPASy Swiss-Prot
Match: PSD_ALKOO (Phosphatidylserine decarboxylase proenzyme OS=Alkaliphilus oremlandii (strain OhILAs) GN=psd PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.284e-33 Identity = 75/208 (36.06%), Postives = 120/208 (57.69%), Query Frame = 1 Query: 1 IPKFVNFFKDQINLADVKYPLEHFKTFNEFFIRELKPGARPIDCMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDICSNSFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKVAFVAIGATMVGSITFLKNTGDFVKKGDEFGYFSFGGSTVICVFEK 624 I +F+ + ++ A+ + P E +K FN+FF R L+ +RPI + EV + AD R+ A++ ++ + +KG + + L N+ + + G ++ RL P DYHRFH P G++ I G Y+VNPIA+ K ++ +NKR +S+ + +FG++ + +GAT VGSI G V+KG+E GYF FGGSTVI +K Sbjct: 63 ISRFIKELQIDMDEAERRNP-EEYKNFNDFFARTLRKESRPIT--KDPEVLISPADGRVFAYEHIDMNKVVQVKGSTYRLMDLFQNNELAREYDGGVCMVIRLCPADYHRFHFPDGGVVNYTKKIEGNYYSVNPIAL-KKIAQIYCQNKREISLFQSNNFGQMVLMEVGATCVGSIVQTYKEGQSVEKGEEKGYFKFGGSTVILFLKK 266
BLAST of FC923196 vs. ExPASy Swiss-Prot
Match: PSD_CLOB8 (Phosphatidylserine decarboxylase proenzyme OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=psd PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 1.854e-32 Identity = 84/208 (40.38%), Postives = 118/208 (56.73%), Query Frame = 1 Query: 1 IPKFVNFFKDQINLADVKYPLEHFKTFNEFFIRELKPGARPIDCMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDICSNSFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKVAFVAIGATMVGSITFLKNTGDFVKKGDEFGYFSFGGSTVICVFEK 624 I FV+ F I++A K + FK+FN+FF REL ARPI+ + + D R+ A++ ++ IKG +S++ L+ +D ++ + NG V+ RL P DYHRFH SGI + I G Y+VNPIA+ S +F ENKR S+ + +F V + +GAT VGSI + V KGDE GYF FGGST I FE+ Sbjct: 62 ISPFVDSFN--IDMAMSKKKINEFKSFNDFFTRELNFDARPIN--SDNNILISPGDGRITAYEDIDLDNIIQIKGLTYSLKELINDDNVASKYKNGICVVLRLCPTDYHRFHFIDSGIPYENHPIKGHYYSVNPIALKS-VPKLFCENKREWSLFKSDNFKDVLHIEVGATCVGSIIQTYSPRVRVNKGDEKGYFKFGGSTTILFFEQ 264
BLAST of FC923196 vs. ExPASy Swiss-Prot
Match: PSD_VIBPA (Phosphatidylserine decarboxylase proenzyme OS=Vibrio parahaemolyticus GN=psd PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 5.395e-32 Identity = 89/221 (40.27%), Postives = 122/221 (55.20%), Query Frame = 1 Query: 34 INLADVKYP-LEHFKTFNEFFIRELKPGARPIDCMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDI-CSNSFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKVAFVAIGATMVGSI------TFLKNTGDFV---------------KKGDEFGYFSFGGSTVICVFEKD 627 +N+ + K+ +HFKTFNEFF+RELK GARPI E +E+ AD+ + F +ED KG +S Q LLG D + F +G+ L+P+DYHR H+P G + Q + +PG L++VNP+ + N+F N+RVV I T FG +A V +GAT+VGSI T G+ V KKG+E G F GSTVI +F KD Sbjct: 46 VNMDEAKHSDPKHFKTFNEFFVRELKEGARPIT--EGDEIITHPADACVSQFGPIEDGQLIQAKGHNYSAQELLGGDEKLAEEFKDGSFATLYLSPRDYHRVHMPCDGTLRQMIYVPGDLFSVNPLTAEN-VPNLFARNERVVCIFDT-EFGPMAQVLVGATIVGSIEQVWAGTITPPRGNTVYKWDYPAEGDKAVILKKGEEMGRFKL-GSTVINLFAKD 261
BLAST of FC923196 vs. ExPASy Swiss-Prot
Match: PSD_CHLCV (Phosphatidylserine decarboxylase proenzyme OS=Chlamydophila caviae GN=psd PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 9.202e-32 Identity = 76/207 (36.71%), Postives = 119/207 (57.49%), Query Frame = 1 Query: 1 IPKFVNFFKDQINLADVKYPLEHFKTFNEFFIRELKPGARPIDCMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDICSNSFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKVAFVAIGATMVGSITFLKNTGDFVKKGDEFGYFSFGGSTVICVFE 621 IP F+ K++I + K + F +FN+FF REL+P ARPI +++ V D + + ++ + F +K ++FS+ LLG+ + +G++V RLA DYHRFH PV + +I G L++V+P+A+ + N+F ENKR ++ + T FG V ++ +GA VGSI KG+E G+F GGSTVI +FE Sbjct: 64 IPGFIK--KNRICTKEFKKSISEFTSFNDFFTRELRPEARPI--ARGDDICVTPVDGAYLIYPNIAEFGEFVVKSKRFSLSKLLGDAKLVEKYASGSVVFARLALFDYHRFHFPVDCLAGPTRNINGYLFSVHPMALKDNF-NIFCENKRTLTELKTEKFGDVLYLEVGALNVGSIVQTYTAEKKYSKGNEKGFFEIGGSTVIVLFE 265
BLAST of FC923196 vs. ExPASy Swiss-Prot
Match: PSD_VIBHB (Phosphatidylserine decarboxylase proenzyme OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=psd PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 2.677e-31 Identity = 89/221 (40.27%), Postives = 121/221 (54.75%), Query Frame = 1 Query: 34 INLADVKYP-LEHFKTFNEFFIRELKPGARPIDCMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDI-CSNSFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKVAFVAIGATMVGSI------TFLKNTGDFV---------------KKGDEFGYFSFGGSTVICVFEKD 627 +N+ + K+ +HFKTFNEFF+RELK GARPI E + V AD+ + F +ED KG FS Q LLG D + F +G+ L+P+DYHR H+P G + Q + +PG L++VNP+ + N+F N+RVV I T FG +A V +GAT+VGSI T G+ V KKG+E G F GSTVI +F K+ Sbjct: 46 VNMDEAKHSDPKHFKTFNEFFVRELKDGARPI--AEGDAVITHPADACVSQFGPIEDGQLIQAKGHNFSAQELLGGDAKLAEEFQDGSFATLYLSPRDYHRVHMPCDGTLRQMIYVPGDLFSVNPLTAEN-VPNLFARNERVVCIFDT-EFGPMAQVLVGATIVGSIEQVWAGTITPPRGNSVYKWDYPAEGDKAVILKKGEEMGRFKL-GSTVINLFVKN 261
BLAST of FC923196 vs. ExPASy Swiss-Prot
Match: PSD_CHLFF (Phosphatidylserine decarboxylase proenzyme OS=Chlamydophila felis (strain Fe/C-56) GN=psd PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 7.790e-31 Identity = 76/207 (36.71%), Postives = 117/207 (56.52%), Query Frame = 1 Query: 1 IPKFVNFFKDQINLADVKYPLEHFKTFNEFFIRELKPGARPIDCMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDICSNSFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKVAFVAIGATMVGSITFLKNTGDFVKKGDEFGYFSFGGSTVICVFE 621 IP FV ++ I + + K L F +FN+FF REL+P ARPI + + + V D + + ++ + F +K + FS+ LLG+ + +G++V RLA DYHRFH PV ++ G L++V+P+A+ + N+F ENKR ++ + T FG V ++ +GA VGSI KGDE G+F GGSTVI +F+ Sbjct: 64 IPGFVK--RNHICVQEFKKSLSEFSSFNDFFTRELRPEARPI--AQGDNICVAPVDGAYLIYPNIAEFGEFVVKSKHFSLSKLLGDASLVEKYASGSVVFARLALFDYHRFHFPVDCWAGPTRNVNGYLFSVHPMALKDNF-NIFCENKRTLTELKTEAFGDVLYLEVGALNVGSIIQTYAPEKRYSKGDEKGFFEIGGSTVIILFQ 265
BLAST of FC923196 vs. ExPASy Swiss-Prot
Match: PSD_VIBVY (Phosphatidylserine decarboxylase proenzyme OS=Vibrio vulnificus (strain YJ016) GN=psd PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.735e-30 Identity = 90/229 (39.30%), Postives = 120/229 (52.40%), Query Frame = 1 Query: 7 KFVNFFKDQINLADVKYPLEHFKTFNEFFIRELKPGARPIDCMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDIC-SNSFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKVAFVAIGATMVGSI--------------TFLK-------NTGDFVKKGDEFGYFSFGGSTVICVFEKD 627 K N D+ AD K H+KTFNEFF+RELK GARPI E + + AD+ + F + + KG FS Q LLG D + F +G+ L+P+DYHR H+P G + Q + +PG L++VNP+ + N+F N+RVV I T FG +A V +GAT+VGSI T K N +KKG+E G F GSTVI +F KD Sbjct: 42 KQYNVNMDEAKHADPK----HYKTFNEFFVRELKEGARPI--AEGDAIITHPADACVSQFGPITNGQLIQAKGHDFSAQELLGGDAALAEEFKDGSFATLYLSPRDYHRVHMPCDGTLRQMIYVPGDLFSVNPLTAEN-VPNLFARNERVVCIFDT-EFGPMAQVLVGATIVGSIEQVWAGTITPPRGNTVYKWDYPASGNHAVILKKGEEMGRFKL-GSTVINLFAKD 261
BLAST of FC923196 vs. ExPASy Swiss-Prot
Match: PSD_VIBVU (Phosphatidylserine decarboxylase proenzyme OS=Vibrio vulnificus GN=psd PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.735e-30 Identity = 90/229 (39.30%), Postives = 120/229 (52.40%), Query Frame = 1 Query: 7 KFVNFFKDQINLADVKYPLEHFKTFNEFFIRELKPGARPIDCMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDIC-SNSFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKVAFVAIGATMVGSI--------------TFLK-------NTGDFVKKGDEFGYFSFGGSTVICVFEKD 627 K N D+ AD K H+KTFNEFF+RELK GARPI E + + AD+ + F + + KG FS Q LLG D + F +G+ L+P+DYHR H+P G + Q + +PG L++VNP+ + N+F N+RVV I T FG +A V +GAT+VGSI T K N +KKG+E G F GSTVI +F KD Sbjct: 42 KQYNVNMDEAKHADPK----HYKTFNEFFVRELKEGARPI--AEGDAIITHPADACVSQFGPITNGQLIQAKGHDFSAQELLGGDAALAEEFKDGSFATLYLSPRDYHRVHMPCDGTLRQMIYVPGDLFSVNPLTAEN-VPNLFARNERVVCIFDT-EFGPMAQVLVGATIVGSIEQVWAGTITPPRGNTVYKWDYPASGNHAVILKKGEEMGRFKL-GSTVINLFAKD 261
BLAST of FC923196 vs. ExPASy Swiss-Prot
Match: PSD_VIBCM (Phosphatidylserine decarboxylase proenzyme OS=Vibrio cholerae serotype O1 (strain M66-2) GN=psd PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 8.613e-30 Identity = 83/208 (39.90%), Postives = 111/208 (53.37%), Query Frame = 1 Query: 67 HFKTFNEFFIRELKPGARPIDCMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDI-CSNSFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKVAFVAIGATMVGSITFL---------------------KNTGDFVKKGDEFGYFSFGGSTVICVFEK 624 HFKTFNEFF+RELK G RPI E E+V AD+ + F ++E KG +S Q LLG D + F +G L+P+DYHR H+P G + Q + +PG L++VNP+ + N+F N+RVV I T FG +A V +GAT+VGSI + N +KKG+E G F GSTVI +F K Sbjct: 58 HFKTFNEFFVRELKAGVRPI--AEGEKVITHPADACVSQFGAIEYGKLIQAKGHTYSAQELLGGDAKLAEEFRDGDFATLYLSPRDYHRVHMPCDGTLRQMIYVPGDLFSVNPLTAEN-VPNLFARNERVVCIFDT-EFGPMAQVLVGATIVGSIELVWAGTVTPPRGNTVYRWDYPANGNQAVVLKKGEEMGRFKL-GSTVINLFAK 260
BLAST of FC923196 vs. ExPASy Swiss-Prot
Match: PSD_VIBCH (Phosphatidylserine decarboxylase proenzyme OS=Vibrio cholerae GN=psd PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 8.613e-30 Identity = 83/208 (39.90%), Postives = 111/208 (53.37%), Query Frame = 1 Query: 67 HFKTFNEFFIRELKPGARPIDCMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDI-CSNSFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKVAFVAIGATMVGSITFL---------------------KNTGDFVKKGDEFGYFSFGGSTVICVFEK 624 HFKTFNEFF+RELK G RPI E E+V AD+ + F ++E KG +S Q LLG D + F +G L+P+DYHR H+P G + Q + +PG L++VNP+ + N+F N+RVV I T FG +A V +GAT+VGSI + N +KKG+E G F GSTVI +F K Sbjct: 58 HFKTFNEFFVRELKAGVRPI--AEGEKVITHPADACVSQFGAIEYGKLIQAKGHTYSAQELLGGDAKLAEEFRDGDFATLYLSPRDYHRVHMPCDGTLRQMIYVPGDLFSVNPLTAEN-VPNLFARNERVVCIFDT-EFGPMAQVLVGATIVGSIELVWAGTVTPPRGNTVYRWDYPANGNQAVVLKKGEEMGRFKL-GSTVINLFAK 260 The following BLAST results are available for this feature:
BLAST of FC923196 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 266
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923196 ID=FC923196; Name=FC923196; organism=Citrus clementina; type=EST; length=627bpback to top |