FC923196
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923196 vs. ExPASy Swiss-Prot
Match: PSD_ECO8A (Phosphatidylserine decarboxylase proenzyme OS=Escherichia coli O8 (strain IAI1) GN=psd PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.681e-25 Identity = 79/229 (34.50%), Postives = 119/229 (51.97%), Query Frame = 1 Query: 1 IPKFVNFFKDQINLADVKYPLEHFKTFNEFFIRELKPGARPIDCMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLL-GNDICSNSFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKVAFVAIGATMVGSITFL---------------------KNTGDF-VKKGDEFGYFSFGGSTVICVF 618 I FV ++K + A K ++TFNEFF+R L+ RPID V V AD + +E+ KG +S++ LL GN + ++ F NGT V L+P+DYHR H+P +GI+ + + +PG L++VN + + N+F N+RV+ + T FG +A + +GAT+VGSI + +N G + KG E G F GSTVI +F Sbjct: 38 IDLFVKYYKVDMKEAQ-KPDTASYRTFNEFFVRPLRDEVRPIDT--DPNVLVMPADGVISQLGKIEEDKILQAKGHNYSLEALLAGNYLMADLFRNGTFVTTYLSPRDYHRVHMPCNGILREMIYVPGDLFSVNHLTAQN-VPNLFARNERVICLFDT-EFGPMAQILVGATIVGSIETVWAGTITPPREGIIKRWTWPAGENDGSVALLKGQEMGRFKL-GSTVINLF 260
BLAST of FC923196 vs. ExPASy Swiss-Prot
Match: PSD_ECO81 (Phosphatidylserine decarboxylase proenzyme OS=Escherichia coli O81 (strain ED1a) GN=psd PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.681e-25 Identity = 79/229 (34.50%), Postives = 119/229 (51.97%), Query Frame = 1 Query: 1 IPKFVNFFKDQINLADVKYPLEHFKTFNEFFIRELKPGARPIDCMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLL-GNDICSNSFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKVAFVAIGATMVGSITFL---------------------KNTGDF-VKKGDEFGYFSFGGSTVICVF 618 I FV ++K + A K ++TFNEFF+R L+ RPID V V AD + +E+ KG +S++ LL GN + ++ F NGT V L+P+DYHR H+P +GI+ + + +PG L++VN + + N+F N+RV+ + T FG +A + +GAT+VGSI + +N G + KG E G F GSTVI +F Sbjct: 38 IDLFVKYYKVDMKEAQ-KPDTASYRTFNEFFVRPLRDEVRPIDT--DPNVLVMPADGVISQLGKIEEDKILQAKGHNYSLEALLAGNYLMADLFRNGTFVTTYLSPRDYHRVHMPCNGILREMIYVPGDLFSVNHLTAQN-VPNLFARNERVICLFDT-EFGPMAQILVGATIVGSIETVWAGTITPPREGIIKRWTWPAGENDGSVALLKGQEMGRFKL-GSTVINLF 260
BLAST of FC923196 vs. ExPASy Swiss-Prot
Match: PSD_ECO7I (Phosphatidylserine decarboxylase proenzyme OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=psd PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.681e-25 Identity = 79/229 (34.50%), Postives = 119/229 (51.97%), Query Frame = 1 Query: 1 IPKFVNFFKDQINLADVKYPLEHFKTFNEFFIRELKPGARPIDCMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLL-GNDICSNSFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKVAFVAIGATMVGSITFL---------------------KNTGDF-VKKGDEFGYFSFGGSTVICVF 618 I FV ++K + A K ++TFNEFF+R L+ RPID V V AD + +E+ KG +S++ LL GN + ++ F NGT V L+P+DYHR H+P +GI+ + + +PG L++VN + + N+F N+RV+ + T FG +A + +GAT+VGSI + +N G + KG E G F GSTVI +F Sbjct: 38 IDLFVKYYKVDMKEAQ-KPDTASYRTFNEFFVRPLRDEVRPIDT--DPNVLVMPADGVISQLGKIEEDKILQAKGHNYSLEALLAGNYLMADLFRNGTFVTTYLSPRDYHRVHMPCNGILREMIYVPGDLFSVNHLTAQN-VPNLFARNERVICLFDT-EFGPMAQILVGATIVGSIETVWAGTITPPREGIIKRWTWPAGENDGSVALLKGQEMGRFKL-GSTVINLF 260
BLAST of FC923196 vs. ExPASy Swiss-Prot
Match: PSD_ECO5E (Phosphatidylserine decarboxylase proenzyme OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=psd PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.681e-25 Identity = 79/229 (34.50%), Postives = 119/229 (51.97%), Query Frame = 1 Query: 1 IPKFVNFFKDQINLADVKYPLEHFKTFNEFFIRELKPGARPIDCMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLL-GNDICSNSFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKVAFVAIGATMVGSITFL---------------------KNTGDF-VKKGDEFGYFSFGGSTVICVF 618 I FV ++K + A K ++TFNEFF+R L+ RPID V V AD + +E+ KG +S++ LL GN + ++ F NGT V L+P+DYHR H+P +GI+ + + +PG L++VN + + N+F N+RV+ + T FG +A + +GAT+VGSI + +N G + KG E G F GSTVI +F Sbjct: 38 IDLFVKYYKVDMKEAQ-KPDTASYRTFNEFFVRPLRDEVRPIDT--DPNVLVMPADGVISQLGKIEEDKILQAKGHNYSLEALLAGNYLMADLFRNGTFVTTYLSPRDYHRVHMPCNGILREMIYVPGDLFSVNHLTAQN-VPNLFARNERVICLFDT-EFGPMAQILVGATIVGSIETVWAGTITPPREGIIKRWTWPAGENDGSVALLKGQEMGRFKL-GSTVINLF 260
BLAST of FC923196 vs. ExPASy Swiss-Prot
Match: PSD_ECO57 (Phosphatidylserine decarboxylase proenzyme OS=Escherichia coli O157:H7 GN=psd PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.681e-25 Identity = 79/229 (34.50%), Postives = 119/229 (51.97%), Query Frame = 1 Query: 1 IPKFVNFFKDQINLADVKYPLEHFKTFNEFFIRELKPGARPIDCMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLL-GNDICSNSFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKVAFVAIGATMVGSITFL---------------------KNTGDF-VKKGDEFGYFSFGGSTVICVF 618 I FV ++K + A K ++TFNEFF+R L+ RPID V V AD + +E+ KG +S++ LL GN + ++ F NGT V L+P+DYHR H+P +GI+ + + +PG L++VN + + N+F N+RV+ + T FG +A + +GAT+VGSI + +N G + KG E G F GSTVI +F Sbjct: 38 IDLFVKYYKVDMKEAQ-KPDTASYRTFNEFFVRPLRDEVRPIDT--DPNVLVMPADGVISQLGKIEEDKILQAKGHNYSLEALLAGNYLMADLFRNGTFVTTYLSPRDYHRVHMPCNGILREMIYVPGDLFSVNHLTAQN-VPNLFARNERVICLFDT-EFGPMAQILVGATIVGSIETVWAGTITPPREGIIKRWTWPAGENDGSVALLKGQEMGRFKL-GSTVINLF 260
BLAST of FC923196 vs. ExPASy Swiss-Prot
Match: PSD_ECO27 (Phosphatidylserine decarboxylase proenzyme OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=psd PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.681e-25 Identity = 79/229 (34.50%), Postives = 119/229 (51.97%), Query Frame = 1 Query: 1 IPKFVNFFKDQINLADVKYPLEHFKTFNEFFIRELKPGARPIDCMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLL-GNDICSNSFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKVAFVAIGATMVGSITFL---------------------KNTGDF-VKKGDEFGYFSFGGSTVICVF 618 I FV ++K + A K ++TFNEFF+R L+ RPID V V AD + +E+ KG +S++ LL GN + ++ F NGT V L+P+DYHR H+P +GI+ + + +PG L++VN + + N+F N+RV+ + T FG +A + +GAT+VGSI + +N G + KG E G F GSTVI +F Sbjct: 38 IDLFVKYYKVDMKEAQ-KPDTASYRTFNEFFVRPLRDEVRPIDT--DPNVLVMPADGVISQLGKIEEDKILQAKGHNYSLEALLAGNYLMADLFRNGTFVTTYLSPRDYHRVHMPCNGILREMIYVPGDLFSVNHLTAQN-VPNLFARNERVICLFDT-EFGPMAQILVGATIVGSIETVWAGTITPPREGIIKRWTWPAGENDGSVALLKGQEMGRFKL-GSTVINLF 260
BLAST of FC923196 vs. ExPASy Swiss-Prot
Match: PSD_ECO24 (Phosphatidylserine decarboxylase proenzyme OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=psd PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.681e-25 Identity = 79/229 (34.50%), Postives = 119/229 (51.97%), Query Frame = 1 Query: 1 IPKFVNFFKDQINLADVKYPLEHFKTFNEFFIRELKPGARPIDCMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLL-GNDICSNSFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKVAFVAIGATMVGSITFL---------------------KNTGDF-VKKGDEFGYFSFGGSTVICVF 618 I FV ++K + A K ++TFNEFF+R L+ RPID V V AD + +E+ KG +S++ LL GN + ++ F NGT V L+P+DYHR H+P +GI+ + + +PG L++VN + + N+F N+RV+ + T FG +A + +GAT+VGSI + +N G + KG E G F GSTVI +F Sbjct: 38 IDLFVKYYKVDMKEAQ-KPDTASYRTFNEFFVRPLRDEVRPIDT--DPNVLVMPADGVISQLGKIEEDKILQAKGHNYSLEALLAGNYLMADLFRNGTFVTTYLSPRDYHRVHMPCNGILREMIYVPGDLFSVNHLTAQN-VPNLFARNERVICLFDT-EFGPMAQILVGATIVGSIETVWAGTITPPREGIIKRWTWPAGENDGSVALLKGQEMGRFKL-GSTVINLF 260
BLAST of FC923196 vs. ExPASy Swiss-Prot
Match: PSD_VARPS (Phosphatidylserine decarboxylase proenzyme OS=Variovorax paradoxus (strain S110) GN=psd PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.195e-25 Identity = 67/205 (32.68%), Postives = 106/205 (51.71%), Query Frame = 1 Query: 61 LEHFKTFNEFFIRELKPGARPIDCMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGND-ICSNSFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKVAFVAIGATMVGSITFL------------------KNTGDFVKKGDEFGYFSFGGSTVICVF 618 + H+K+FN+FF R LKPG RP+ + VC D + F ++E F KG +S L+G D + + F +G+ L+P+DYHR H+P G + + + +PG L++VNP+ +F N+RVV + +AH G V +GAT+VGS+ + + +K+G+E G F GSTV+ +F Sbjct: 57 INHYKSFNQFFTRALKPGVRPL----AQADLVCPVDGAISQFGAIEGDQIFQAKGHNYSTTALVGGDAVLAARFAHGSFATLYLSPKDYHRIHMPCDGRLVRMIHVPGDLFSVNPVTARG-VPGLFARNERVVCVFESAH-GPFVLVLVGATIVGSMATVWHGVVNPPRGGELREWHYADQQILLKQGEEMGRFLL-GSTVVMLF 254
BLAST of FC923196 vs. ExPASy Swiss-Prot
Match: PSD_ANOFW (Phosphatidylserine decarboxylase proenzyme OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=psd PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.195e-25 Identity = 67/199 (33.67%), Postives = 108/199 (54.27%), Query Frame = 1 Query: 31 QINLADVKYPLEHFKTFNEFFIRELKPGARPIDCMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLLGNDICSNSFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKVAFVAIGATMVGSITFLKNTGDFVKKGDEFGYFSFGGSTVICVFEKD 627 +IN +++ L ++T + F+R LK G RPID + V D+ + + D +KG+ +SI+ +LG+D + +L+GT +I L+P YHR H P+ G + + ++ G Y VN + + + +R+ + + + A V +GA V SI L + D VKKG+E GYFSF GSTV+ +FEKD Sbjct: 43 KINKEEMEKKLHEYETLQQLFVRTLKKGLRPIDT--HPDSVVSPVDAVIEDVGIITDQKEIIVKGKTYSIREMLGDDQIAEKYLHGTFIILYLSPSHYHRIHSPICGEVVKQWELGGKSYPVNRLGLKYGKAPLSKNYRRITELYTNGMY--TAIVKVGAMFVNSIE-LTHEHDHVKKGEEIGYFSF-GSTVVLLFEKD 235
BLAST of FC923196 vs. ExPASy Swiss-Prot
Match: PSD_ECOUT (Phosphatidylserine decarboxylase proenzyme OS=Escherichia coli (strain UTI89 / UPEC) GN=psd PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.745e-25 Identity = 79/229 (34.50%), Postives = 117/229 (51.09%), Query Frame = 1 Query: 1 IPKFVNFFKDQINLADVKYPLEHFKTFNEFFIRELKPGARPIDCMEREEVAVCAADSRLMAFKSVEDSLRFWIKGQKFSIQGLL-GNDICSNSFLNGTMVIFRLAPQDYHRFHLPVSGIIEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVVSIISTAHFGKVAFVAIGATMVGSI------TFLKNTGDFVK----------------KGDEFGYFSFGGSTVICVF 618 I FV ++K + A K ++TFNEFF+R L+ RPID V V AD + +E+ KG +S++ LL GN + ++ F NGT V L+P+DYHR H+P +GI+ + + +PG L++VN + + N+F N+RV+ + T FG +A + +GAT+VGSI T +K KG E G F GSTVI +F Sbjct: 38 IDLFVKYYKVDMKEAQ-KPDTASYRTFNEFFVRPLRDEVRPIDT--DPNVLVMPADGVISQLGKIEEDKILQAKGHNYSLEALLAGNYLMADLFRNGTFVTTYLSPRDYHRVHMPCNGILREMIYVPGDLFSVNHLTAQN-VPNLFARNERVICLFDT-EFGPMAQILVGATIVGSIETVWAGTITPPREGIIKRWTWPAGENDDSVALLKGQEMGRFKL-GSTVINLF 260 The following BLAST results are available for this feature:
BLAST of FC923196 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 266
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC923196 ID=FC923196; Name=FC923196; organism=Citrus clementina; type=EST; length=627bpback to top |