FC923203
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923203 vs. ExPASy Swiss-Prot
Match: IF4E2_SCHPO (Eukaryotic translation initiation factor 4E-2 OS=Schizosaccharomyces pombe GN=tif452 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.343e-17 Identity = 49/139 (35.25%), Postives = 79/139 (56.83%), Query Frame = 3 Query: 246 HPLKNKFVFWYTRR-TPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSG--RFWEDLVLALVGDQLD-YGDNICGAVLSIRFNEDILSVWKPHASD 650 HPL++++ W+ + T G+ + D +K+I+ F TVE FW + +++ S+LP+ +D F +GIRP WED N NGGKW + K S W +VLA +G+ LD G + G V ++R ++VW + +D Sbjct: 64 HPLQHEWTLWFLKPPTQGLE----WSDLLKEIISFKTVEEFWGIFKTISKASMLPAKSDYSYFLKGIRPEWEDPQNMNGGKWAYQSKHKGSNLDELWLYMVLAAIGETLDPTGKEVTGVVCNMRKGFYRIAVWTRNCND 198
BLAST of FC923203 vs. ExPASy Swiss-Prot
Match: IF4E5_CAEEL (Eukaryotic translation initiation factor 4E-5 OS=Caenorhabditis elegans GN=ife-5 PE=1 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 1.485e-16 Identity = 47/153 (30.72%), Postives = 80/153 (52.29%), Query Frame = 3 Query: 228 ELKANLHPLKNKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKK----VVSGRFWEDLVLALVGDQLDYG-DNICGAVLSIRFNEDILSVWKPHASDHQAVMAL 671 EL ++PL+ + +W+ S++D +KK+ F+TV FW Y + PS L D ++F++ I+P WE N +GG+W+I K V W +++LAL+G+Q ++ICG V ++R +SVW + +D M + Sbjct: 3 ELTTPIYPLQRNWSWWFLNDD----RNASWQDRLKKVYTFNTVPEFWAFYEAILPPSGLNDLCDYNVFRDDIQPKWEAPENWDGGRWLIIINKGKTPEVLDAVWLEILLALIGEQFGKDMESICGLVCNVRGQGSKISVWTKNCNDDDTNMRI 151
BLAST of FC923203 vs. ExPASy Swiss-Prot
Match: IF4E1_SCHPO (Eukaryotic translation initiation factor 4E-1 OS=Schizosaccharomyces pombe GN=tif451 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.390e-14 Identity = 52/172 (30.23%), Postives = 85/172 (49.42%), Query Frame = 3 Query: 189 DNNNKDAEERQAR-----ELKANL-HPLKNKFVFWYTRR-TPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFK---KVVSGRFWEDLVLALVGDQLD-YGDNICGAVLSIRFNEDILSVWKPHASDHQAVMAL 671 +N + +E+ R ++ NL HPL + W+ TPG+ + + K I+ F++VE FW + ++ S LP +D F+EG+RP WED N GGKW + K W VLA +G+ LD G + G V+++R L+VW ++ + +M + Sbjct: 13 ENTVSEPQEKALRTVFDDKINFNLKHPLARPWTLWFLMPPTPGLE----WNELQKNIITFNSVEEFWGIHNNINPASSLPIKSDYSFFREGVRPEWEDVHNKTGGKWAFQNKGRGGNALDEMWLTTVLAAIGETLDPTGQEVMGVVINMRKGFYRLAVWTKSCNNREVLMEI 180 The following BLAST results are available for this feature:
BLAST of FC923203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 43
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC923203 ID=FC923203; Name=FC923203; organism=Citrus clementina; type=EST; length=743bpback to top |