FC923205
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923205 vs. ExPASy Swiss-Prot
Match: DERL3_HUMAN (Derlin-3 OS=Homo sapiens GN=DERL3 PE=1 SV=2) HSP 1 Score: 189.119 bits (479), Expect = 1.796e-47 Identity = 90/200 (45.00%), Postives = 124/200 (62.00%), Query Frame = 3 Query: 69 YKQMPIITRTYLTAAIVTTVGCSLDIISPFNLCLHPTLVVKHYQFWRLITNFLFFRKXXXXXXXXXXXXARYCKLLEENSFRGRTADFLYMLLFGATFLTGTVLIGGMIPYLSESFAKIIFLSNSLTLMMVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVFVGASAWVDLLGMIAGHAYYFLEDVYPRMTGRRPL 668 + Q+P +TR Y A ++TT L+++SPF L +P LV + +Q WRL+TNFLFF RYC++LEE SFRGRTADF++M LFG +T L+G + FL +L M+VYVWS+++P + ++F GL TF A +LPW L+GFS+ +G S VDLLG+ GH YYFLEDV+P G + L Sbjct: 10 FLQVPAVTRAYTAACVLTTAAVQLELLSPFQLYFNPHLVFRKFQVWRLVTNFLFFGPLGFSFFFNMLFVFRYCRMLEEGSFRGRTADFVFMFLFGGVLMTLLGLLGSLF-----------FLGQALMAMLVYVWSRRSPRVRVNFFGLLTFQAPFLPWALMGFSLLLGNSILVDLLGIAVGHIYYFLEDVFPNQPGGKRL 198
BLAST of FC923205 vs. ExPASy Swiss-Prot
Match: DERL2_CAEEL (Derlin-2 OS=Caenorhabditis elegans GN=der-2 PE=2 SV=2) HSP 1 Score: 186.037 bits (471), Expect = 1.521e-46 Identity = 92/201 (45.77%), Postives = 128/201 (63.68%), Query Frame = 3 Query: 72 KQMPIITRTYLTAAIVTTVGCSLDIISPFNLCLHPTLVVKHYQFWRLITNFLFFRKXXXXXXXXXXXXARYCKLLEENSFRGRTADFLYMLLFGATFLTGTVLIGGMIPYLSESFAKIIFLSNSLTLMMVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVFVGASAWVDLLGMIAGHAYYFLEDVYP-RMTGRRPLK 671 ++MP +TR Y A ++ T L+ ++PF+L + L+++ YQFWRLIT+F FF RYC +LEE SFRGR ADF+YM LFGA + LS F +I+FL + T+M+VY+WS++NP I M+F G+ TFTA YLPWVLL FS+ +G +A VD +G+ GH Y+FLEDV+P + G+R LK Sbjct: 9 EEMPPVTRFYTGACVLLTTAVHLEFVTPFHLYFNWELIIRKYQFWRLITSFCFFGSFGFSFLFNMIFTYRYCMMLEEGSFRGRRADFVYMFLFGAVLMI-----------LSGIFVQILFLGQAFTIMLVYIWSRRNPMIQMNFFGVLTFTAPYLPWVLLLFSLLLGNNAVVDFMGIACGHIYFFLEDVFPFQEHGKRFLK 198
BLAST of FC923205 vs. ExPASy Swiss-Prot
Match: DERL3_MOUSE (Derlin-3 OS=Mus musculus GN=Derl3 PE=2 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 2.868e-45 Identity = 86/200 (43.00%), Postives = 120/200 (60.00%), Query Frame = 3 Query: 69 YKQMPIITRTYLTAAIVTTVGCSLDIISPFNLCLHPTLVVKHYQFWRLITNFLFFRKXXXXXXXXXXXXARYCKLLEENSFRGRTADFLYMLLFGATFLTGTVLIGGMIPYLSESFAKIIFLSNSLTLMMVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVFVGASAWVDLLGMIAGHAYYFLEDVYPRMTGRRPL 668 + Q+P +TR Y A ++TT L+++SPF L +P LV + +Q WRLIT FLFF RYC++LEE SFRGR ADF++M LFG +T +G + FL +L M+VYVWS+++P + ++F GL F A +LPW L+GFS+ +G S DLLG++ GH YYFLEDV+P G + L Sbjct: 10 FLQVPAVTRAYTAACVLTTAAVQLELLSPFQLYFNPHLVFRKFQVWRLITTFLFFGPLGFGFFFNMLFVFRYCRMLEEGSFRGRKADFVFMFLFGGVLMTLLGFLGSLF-----------FLGQALMAMLVYVWSRRSPHVRVNFFGLLNFQAPFLPWALMGFSLLLGNSVVTDLLGILVGHIYYFLEDVFPNQPGGKRL 198
BLAST of FC923205 vs. ExPASy Swiss-Prot
Match: DERL1_ARATH (Derlin-1 OS=Arabidopsis thaliana GN=DER1 PE=2 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 9.248e-36 Identity = 81/203 (39.90%), Postives = 114/203 (56.16%), Query Frame = 3 Query: 63 DWYKQMPIITRTYLTAAIVTTVGCSLDIISPFNLCLHPTLVVKHYQFWRLITNFLFFRKXXXXXXXXXXXXARYCKLLEENSFRGRTADFLYMLLFGATFLTGTVLIGGMIPYLSESFAKIIFLSNSLTLMMVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVFVGASAWVDLLGMIAGHAYYFLEDVYPRMTGRRPLK 671 ++Y +P IT+ Y T TTV L +++P ++ L P LV+K +Q WRLITN F ARY LE+ F RTADFL+M++FG+ T+L+ +IP+ F L SL M++Y+WS++ P ++S GL T A YLPW +L V G+ DLLG+IAGH YYFL ++P TG+ LK Sbjct: 6 EFYNSLPPITKAYGTLCFFTTVATQLGLVAPVHIALIPELVLKQFQIWRLITNLFFLGGFSINFGIRLLMIARYGVQLEKGPFERRTADFLWMMIFGSF----TLLVLSVIPFFWTPF-----LGVSLVFMLLYLWSREFPNANISLYGLVTLKAFYLPWAMLALDVIFGSPIMPDLLGIIAGHLYYFLTVLHPLATGKNYLK 199
BLAST of FC923205 vs. ExPASy Swiss-Prot
Match: DERL1_ORYSJ (Derlin-1 OS=Oryza sativa subsp. japonica GN=DER1 PE=2 SV=2) HSP 1 Score: 140.198 bits (352), Expect = 9.570e-33 Identity = 77/203 (37.93%), Postives = 109/203 (53.69%), Query Frame = 3 Query: 63 DWYKQMPIITRTYLTAAIVTTVGCSLDIISPFNLCLHPTLVVKHYQFWRLITNFLFFRKXXXXXXXXXXXXARYCKLLEENSFRGRTADFLYMLLFGATFLTGTVLIGGMIPYLSESFAKIIFLSNSLTLMMVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVFVGASAWVDLLGMIAGHAYYFLEDVYPRMTGRRPLK 671 ++Y +P I++ Y T TV C L I++P L L+ V K +Q WRL T+F F K ARY LE+ +F RTADFL+M++FGA ++L IP+L I FL + M++YVWS++ P +S GL + YLPW +LG V G+ LLG++ GH YYFL ++P TG+ LK Sbjct: 6 EYYNSLPPISKAYGTLCFFATVLCQLQILNPPFLALYYPFVFKKFQIWRLFTSFFFLGKFSINFGIRLLMIARYGVQLEKGAFEKRTADFLWMMIFGAI----SLLALSAIPFLD-----IYFLGVPMVSMLLYVWSREYPNSQISMYGLVQLRSFYLPWAMLGLDVIFGSEILPGLLGILVGHTYYFLSVLHPLATGKNYLK 199
BLAST of FC923205 vs. ExPASy Swiss-Prot
Match: DER11_MAIZE (Derlin-1.1 OS=Zea mays GN=DER1.1 PE=2 SV=2) HSP 1 Score: 135.191 bits (339), Expect = 3.079e-31 Identity = 77/203 (37.93%), Postives = 112/203 (55.17%), Query Frame = 3 Query: 63 DWYKQMPIITRTYLTAAIVTTVGCSLDIISPFNLCLHPTLVVKHYQFWRLITNFLFFRKXXXXXXXXXXXXARYCKLLEENSFRGRTADFLYMLLFGATFLTGTVLIGGMIPYLSESFAKIIFLSNSLTLMMVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVFVGASAWVDLLGMIAGHAYYFLEDVYPRMTGRRPLK 671 ++YK +P I++ Y T TTV L I+ P L L LV K ++ WRL+T+F F ARY +LE+ +F RTADFL+M++FGA ++L+ +IP L SF FL + M++YVWS++NP ++ GL + YLPW +L V G+S LLG++ GH YYF ++P TG+ LK Sbjct: 6 EYYKSLPPISKAYGTLCFFTTVLVQLQILHPLFLYLDYPLVFKKFEIWRLLTSFFFLAPFSMKFGIRLLMIARYGVMLEKGAFDKRTADFLWMMIFGAI----SLLVLSIIP-LFNSF----FLGIPMVSMLLYVWSRENPNAQINIYGLVQLRSFYLPWAMLLLDVIFGSSLMPGLLGIMVGHLYYFFAVLHPLATGKSYLK 199
BLAST of FC923205 vs. ExPASy Swiss-Prot
Match: DER12_MAIZE (Derlin-1.2 OS=Zea mays GN=DER1.2 PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 9.903e-30 Identity = 72/203 (35.47%), Postives = 110/203 (54.19%), Query Frame = 3 Query: 63 DWYKQMPIITRTYLTAAIVTTVGCSLDIISPFNLCLHPTLVVKHYQFWRLITNFLFFRKXXXXXXXXXXXXARYCKLLEENSFRGRTADFLYMLLFGATFLTGTVLIGGMIPYLSESFAKIIFLSNSLTLMMVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVFVGASAWVDLLGMIAGHAYYFLEDVYPRMTGRRPLK 671 ++YK +P I++ Y T TTV L I++P L L+ V K ++ WR+ T+F F ARY +LE+ +F RTADFL+M++FGA ++L+ +IP L+ L + M+VYVWS++NP ++ G+ A YLPWV+L V G+ LLG++ GH YY+ ++P TG+ LK Sbjct: 6 EYYKSLPPISKAYGTLCFFTTVLVRLHILNPLFLYLYYPRVFKKFEVWRIFTSFFFLGPFSINFGIRLLMIARYGVMLEKGAFDKRTADFLWMMIFGAI----SLLVLSVIPQLN-----TYVLGLPMVSMLVYVWSRENPNAQINIYGILQLKAFYLPWVMLLLDVIFGSPLMPGLLGIMVGHLYYYFAVLHPLATGKNYLK 199
BLAST of FC923205 vs. ExPASy Swiss-Prot
Match: DERL1_HUMAN (Derlin-1 OS=Homo sapiens GN=DERL1 PE=1 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 5.819e-22 Identity = 67/205 (32.68%), Postives = 97/205 (47.32%), Query Frame = 3 Query: 57 VEDWYKQMPIITRTYLTAAIVTTVGCSLDIISPFNLCLHPTLVVKHYQFWRLITNFLFFRKXXXXXXXXXXXXA---RYCKLLEENSFRGRTADFLYMLLFGATFLTGTVLIGGMIPYLSESFAKIIFLSNSLTLMMVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVFVGASAWVDLLGMIAGHAYYFLEDVYPRMTGRR 662 + DW++ +P ITR + A + + L +ISP L L P + +Q WR IT +F +Y LE +F GR AD+L+MLLF + T L M L L + ++YVW++ N + +SF F A YLPWV+LGF+ +G S +L+G + GH Y+FL YP G R Sbjct: 4 IGDWFRSIPAITRYWFAATVAVPLVGKLGLISPAYLFLWPEAFLYRFQIWRPITATFYFPVGPGTGFLYLVNLYFLYQYSTRLETGAFDGRPADYLFMLLFNWICIVITGLAMDMQ-----------LLMIPLIMSVLYVWAQLNRDMIVSFWFGTRFKACYLPWVILGFNYIIGGSVINELIGNLVGHLYFFLMFRYPMDLGGR 197
BLAST of FC923205 vs. ExPASy Swiss-Prot
Match: DERL1_PONAB (Derlin-1 OS=Pongo abelii GN=DERL1 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 7.600e-22 Identity = 67/205 (32.68%), Postives = 96/205 (46.83%), Query Frame = 3 Query: 57 VEDWYKQMPIITRTYLTAAIVTTVGCSLDIISPFNLCLHPTLVVKHYQFWRLITNFLFFRKXXXXXXXXXXXXA---RYCKLLEENSFRGRTADFLYMLLFGATFLTGTVLIGGMIPYLSESFAKIIFLSNSLTLMMVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVFVGASAWVDLLGMIAGHAYYFLEDVYPRMTGRR 662 + DW++ +P ITR + A + + L +ISP L L P + +Q WR IT +F Y LE +F GR AD+L+MLLF + T L M L L + ++YVW++ N + +SF F A YLPWV+LGF+ +G S +L+G + GH Y+FL YP G R Sbjct: 4 IGDWFRSIPAITRYWFAATVAVPLVGKLGLISPAYLFLWPEAFLYRFQIWRPITATFYFPVGPGTGFLYLVNLYFLYHYSTRLETGAFDGRPADYLFMLLFNWICIVITGLAMDMQ-----------LLMIPLIMSVLYVWAQLNRDMIVSFWFGTRFKACYLPWVILGFNYIIGGSVINELIGNLVGHLYFFLMFRYPMDLGGR 197
BLAST of FC923205 vs. ExPASy Swiss-Prot
Match: DERL1_BOVIN (Derlin-1 OS=Bos taurus GN=DERL1 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.693e-21 Identity = 66/205 (32.20%), Postives = 96/205 (46.83%), Query Frame = 3 Query: 57 VEDWYKQMPIITRTYLTAAIVTTVGCSLDIISPFNLCLHPTLVVKHYQFWRLITNFLFFRKXXXXXXXXXXXXA---RYCKLLEENSFRGRTADFLYMLLFGATFLTGTVLIGGMIPYLSESFAKIIFLSNSLTLMMVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVFVGASAWVDLLGMIAGHAYYFLEDVYPRMTGRR 662 + DW++ +P ITR + A + + L +ISP L P + +Q WR IT +F +Y LE +F GR AD+L+MLLF + T L M L L + ++YVW++ N + +SF F A YLPWV+LGF+ +G S +L+G + GH Y+FL YP G R Sbjct: 4 IGDWFRSIPTITRYWFAATVAVPLVGKLGLISPAYFFLWPEAFLYRFQIWRPITATFYFPVGPGTGFLYLVNLYFLYQYSTRLETGAFDGRPADYLFMLLFNWICIVITGLAMDMQ-----------LLMIPLIMSVLYVWAQLNRDMIVSFWFGTRFKACYLPWVILGFNYIIGGSVINELIGNLVGHLYFFLMFRYPMDLGGR 197 The following BLAST results are available for this feature:
BLAST of FC923205 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923205 ID=FC923205; Name=FC923205; organism=Citrus clementina; type=EST; length=679bpback to top |