FC923205
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923205 vs. ExPASy Swiss-Prot
Match: DERL1_MOUSE (Derlin-1 OS=Mus musculus GN=Derl1 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.888e-21 Identity = 66/205 (32.20%), Postives = 95/205 (46.34%), Query Frame = 3 Query: 57 VEDWYKQMPIITRTYLTAAIVTTVGCSLDIISPFNLCLHPTLVVKHYQFWRLITNFLFFRKXXXXXXXXXXXXA---RYCKLLEENSFRGRTADFLYMLLFGATFLTGTVLIGGMIPYLSESFAKIIFLSNSLTLMMVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVFVGASAWVDLLGMIAGHAYYFLEDVYPRMTGRR 662 + DW++ +P ITR + A + + L IISP L P + +Q WR T +F +Y LE +F GR AD+L+MLLF + T L M L L + ++YVW++ N + +SF F A YLPWV+LGF+ +G S +L+G + GH Y+FL YP G R Sbjct: 4 IGDWFRSIPAITRYWFAATVAVPLIGKLGIISPAYFFLWPEAFLYRFQIWRPFTATFYFPVGPGTGFLYLVNLYFLYQYSTRLEAGAFDGRPADYLFMLLFNWICIVITGLAMDMQ-----------LLMIPLIMSVLYVWAQLNRDLIVSFWFGTRFKACYLPWVILGFNYIIGGSVINELIGNLVGHLYFFLMFRYPMDLGGR 197
BLAST of FC923205 vs. ExPASy Swiss-Prot
Match: DERL1_DROME (Derlin-1 OS=Drosophila melanogaster GN=CG10908 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.926e-21 Identity = 64/204 (31.37%), Postives = 95/204 (46.57%), Query Frame = 3 Query: 66 WYKQMPIITRTYLTAAIVTTVGCSLDIISPFNLCLHPTLVVKHYQFWRLITNFLFF---RKXXXXXXXXXXXXARYCKLLEENSFRGRTADFLYMLLFGATFLTGTVLIGGMIPYLSESFAKIIFLSNSLTLMMVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVFVGASAWVDLLGMIAGHAYYFLEDVYPRMTGRRPL 668 WY+ +P TR +LTA +V ++ C D+I L L + V Q WR +T+ F +Y LE++ + AD+LY+L+ A IGGMI + FL ++L L + Y+W + N + +SF F A YLPWVL F F+ + L+G+ GH YYF + Y + G PL Sbjct: 6 WYRSLPRFTRYWLTATVVLSMLCRFDVIPLHWLHLDRSAVFSKLQLWRCMTSLFVFPISSNTAFHFLINCFFIVQYSSKLEKDQYSRSPADYLYLLIVSAVLAN----IGGMI-------FNVYFLMDTLVLAITYIWCQLNKDVTVSFWFGTRFKAMYLPWVLAAFE-FIFHFSLASLVGIFVGHVYYFFKFQYSQDLGGTPL 197
BLAST of FC923205 vs. ExPASy Swiss-Prot
Match: DERL1_CAEEL (Derlin-1 OS=Caenorhabditis elegans GN=cup-2 PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.114e-20 Identity = 59/199 (29.65%), Postives = 98/199 (49.25%), Query Frame = 3 Query: 57 VEDWYKQMPIITRTYLTAAIVTTVGCSLDIISPFNLCLHPTLVVKHYQFWRLITNFLFFR---KXXXXXXXXXXXXARYCKLLEENSFRGRTADFLYMLLFGATFLTGTVLIGGMIPYLSESFAKIIFLSNSLTLMMVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVFVGASAWVDLLGMIAGHAYYFLEDVYP 644 +E++ +PI+TR + A+ + + I+ + L LVV +QFWR +T +++ + Y K LE ++RGR+AD+L+ML+F F +G + I FL + + ++YVW + N +SF F A YLPWVL GF+ + +L+G++ GHAY+F+ YP Sbjct: 3 LENFLLGIPIVTRYWFLASTIIPLLGRFGFINVQWMFLQWDLVVNKFQFWRPLTALIYYPVTPQTGFHWLMMCYFLYNYSKALESETYRGRSADYLFMLIFNWFFCSGLCMA-----------LDIYFLLEPMVISVLYVWCQVNKDTIVSFWFGMRFPARYLPWVLWGFNAVLRGGGTNELVGILVGHAYFFVALKYP 190
BLAST of FC923205 vs. ExPASy Swiss-Prot
Match: DERL1_DICDI (Probable derlin-1 homolog OS=Dictyostelium discoideum GN=derl1 PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.342e-18 Identity = 53/201 (26.37%), Postives = 95/201 (47.26%), Query Frame = 3 Query: 57 VEDWYKQMPIITRTYLTAAIVTTVGCSLDIISPFNLCLHPTLVVKHYQFWRLITNFLFFRKXXXXXXXXXXXXARYCKLLEENSFRGRTADFLYMLLFGATFLTGTVLIGGMIPYLSESFAKIIFLSNSLTLMMVYVWSKQNPFIHMSFLGLFTFTAAYLPWV-LLGFSVFVGASAWVDLLGMIAGHAYYFLEDVYPRMTG 656 V++W+ +P ++R + V ++ +IS L L T KH+ WRLIT +Y LE ++ G++ D+L+ ++F + ++ G + Y FL + ++Y++S+ NP +F G F+F YLPWV L+ + G + D L +++GH +++L D+YPR G Sbjct: 4 VKEWFNSIPPVSRYMFAIFLGIPVLAAMHLISFNYLYLDFTFTFKHFHLWRLITAPCIISSLGPMFLFNLIFFYQYTTRLESLNYAGKSDDYLFCIIFISIC---NIIFGLIFEYY--------FLGTMTIMSLIYIYSRMNPTGTSNFYGFFSFKTIYLPWVFLVAHFLQTGHPPYSDFLAIVSGHIFFYLTDIYPRANG 193
BLAST of FC923205 vs. ExPASy Swiss-Prot
Match: YGR8_SCHPO (Uncharacterized derlin-like protein C365.08c OS=Schizosaccharomyces pombe GN=SPBC365.08c PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.312e-12 Identity = 56/203 (27.59%), Postives = 88/203 (43.35%), Query Frame = 3 Query: 57 VEDWYKQMPIITRTYLTAAIVTTVGCSLDIISPFNLCLHPTLVVKHYQFWRLITNFLFFRKXXXXXXXXXXXXARYCKLLEENSFRGRTADFLYMLLFGATFLTGTVLIGGMIPYLSESFAKIIFLSNSLTLMMVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVFVGASAWVDLL--GMIAGHAYYFLEDVYPRMTGR 659 +++ ++P +TR L TT+ ++SP L LH LVV+ Q++RL TN+L + +Y LE F ++ L+ A + LI G+ L++S A I Y WS N F + FL F YLP+VLLGFS G + +L G+I+ F + ++ + R Sbjct: 9 IQELLSRIPPVTRYILLGTAATTILTLCQLLSPSMLVLHYPLVVRQKQWYRLFTNYL-YAGTGFDFIMNIYFFYQYSTYLENFVFARNAKKYIIYLVKVALLIDAFSLISGLGSALNQSLAAAI----------AYNWSLFNSFSKIQFLFGFHVQGKYLPYVLLGFSFLTGGLPSLVVLGFGIISAMIVNFFDSIHTPVVHR 200
BLAST of FC923205 vs. ExPASy Swiss-Prot
Match: YFFH_SCHPO (Uncharacterized derlin-like protein C1687.17c OS=Schizosaccharomyces pombe GN=SPAC1687.17c PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.709e-11 Identity = 42/146 (28.77%), Postives = 69/146 (47.26%), Query Frame = 3 Query: 201 FWRLITNFLFFRKXXXXXXXXXXXXARYCKLLEENSFRGRTADFLYMLLFGATFLTGTVLIGGMIPYLSESFAKIIFLSNSLTLMMVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFS-VFVGASAWVDLLGMIAGHAYYFLED 635 +WR IT FL+ R+ +LE +S +T FL TVLI ++ F+ + F ++ + M+Y+WS ++P +S LGLF A Y+PWV++ + G +DL+ + GH Y+F+ D Sbjct: 30 YWRAITTFLYVGPFGLELILYLSFLLRFMSMLERSSPPPQTQSFLK-----------TVLIVWFSLLVTSYFSYMPFAASYFSFTMLYIWSWKHPLYRISILGLFDVKAPYVPWVMVLLRWLRTGIFPLLDLISALIGHVYFFVTD 164 The following BLAST results are available for this feature:
BLAST of FC923205 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC923205 ID=FC923205; Name=FC923205; organism=Citrus clementina; type=EST; length=679bpback to top |