FC923244
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923244 vs. ExPASy Swiss-Prot
Match: GIMA6_MOUSE (GTPase IMAP family member 6 OS=Mus musculus GN=Gimap6 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.286e-15 Identity = 53/123 (43.09%), Postives = 74/123 (60.16%), Query Frame = 2 Query: 182 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLXXXXXXXXXXQEEEAALHSLQTLFGKKIFDYMIVVF 550 ++LVG+TG+GKSATGNSILGR+AF+S+ S+ VT+T + + T +G+ + VIDTP +F E K+I C +A G HAVL E++A LQ +FG I Y I+VF Sbjct: 106 LLLVGKTGSGKSATGNSILGRQAFESKISARPVTTTFQ-KGTREFEGKELEVIDTPDIFSPQNQPEATAKKI--CDLLASPGPHAVL-LVIQVGRYTAEDQAVARCLQEIFGNTILAYTILVF 224
BLAST of FC923244 vs. ExPASy Swiss-Prot
Match: GIMA8_MOUSE (GTPase IMAP family member 8 OS=Mus musculus GN=Gimap8 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.561e-15 Identity = 57/169 (33.73%), Postives = 88/169 (52.07%), Query Frame = 2 Query: 182 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFDFSAGSE----FVGKEIVKCIGMAKDGIHAVLXXXXXXXXXXQEEEAALHSLQTLFGKKIFDYMIVVFXXXXXXXXXXXXXXXYLGRECPKPLKEILQLCDNRCVLFDNR 676 ++L+GR+G GKSATGN+ILGR AF S+ + VTS+ + + L D Q V V+DTP F + G+E + +EI C+ + ++G+ + QE+E + L+ F + I YMIV+F Y K LK+IL+ C+ R F+N+ Sbjct: 478 IILLGRSGAGKSATGNTILGRSAFFSQLRAQPVTSSSQSGKRTL-DWQDVVVVDTPS-FIQTPGTEKDPSRLKEEIHHCLSLCEEGM-KIFVLVLQLGRFTQEDEVVVEQLEASFEENIMKYMIVLF--TRKEDLGDGDLHDYTNNTKNKALKKILKKCNGRVCAFNNK 641 HSP 2 Score: 79.7221 bits (195), Expect = 1.631e-14 Identity = 53/173 (30.64%), Postives = 86/173 (49.71%), Query Frame = 2 Query: 182 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLXXXXXXXXXXQEEEAALHSLQTLFGKKIFDYMIVVFXXXXXXXXXXXXXXXYLGRECPKPLKEILQ-LCDNRCVLFDNRLXMRPRE 697 ++L+G+ G GKSATGN+ILG+ F+S+ S VT C+ + ++ QV+ VIDTP LF + SE + + +C+ + D H VL +E+ + + G K + +MIVVF E + LKE+++ + RC F+N+ + RE Sbjct: 51 LLLLGKQGAGKSATGNTILGKAVFESKFSDHMVTDRCQSESVSVRGKQVI-VIDTPDLFSSLSCSEVRQQNLKQCLELLADD-HCVLLLVTPIGHYTEEDRETIEGIWGKIGPKAYRHMIVVFTREDELDEDSLWNYI----ESKESLKELIKNIGSRRCCTFNNKADKKQRE 217
BLAST of FC923244 vs. ExPASy Swiss-Prot
Match: GIMA6_RAT (GTPase IMAP family member 6 OS=Rattus norvegicus GN=Gimap6 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.631e-14 Identity = 59/165 (35.76%), Postives = 83/165 (50.30%), Query Frame = 2 Query: 182 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLXXXXXXXXXXQEEEAALHSLQTLFGKKIFDYMIVVFXXXXXXXXXXXXXXXYLGRECPKPLKEILQLCDNRCVLFDNR 676 ++LVG+TG+GKSATGNSILGR+ F+S+ S+ VT + L +G+ + VIDTP + E K+I C +A G HAVL +++EAA LQ +FG I Y I+VF Y+ K L + C+ R F+NR Sbjct: 105 LLLVGKTGSGKSATGNSILGRQVFESKISARPVTMAFQKGSREL-EGKELEVIDTPDILSPQNQPEATAKKI--CDILASPGPHAVLLVIQVGRYTTEDQEAA-RCLQEIFGNGILAYTILVF--TRKEELAEGSLEEYIKENNNKTLDALDVACERRHCGFNNR 263
BLAST of FC923244 vs. ExPASy Swiss-Prot
Match: GIMA8_RAT (GTPase IMAP family member 8 OS=Rattus norvegicus GN=Gimap8 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.094e-14 Identity = 52/173 (30.06%), Postives = 87/173 (50.29%), Query Frame = 2 Query: 182 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLXXXXXXXXXXQEEEAALHSLQTLFGKKIFDYMIVVFXXXXXXXXXXXXXXXYLGRECPKPLKEILQ-LCDNRCVLFDNRLXMRPRE 697 ++L+G+ G GKSATGN+ILG+ F+SR S VT C+ + ++ QV+ VIDTP LF E + + +C+ + D VL +E++ + +Q +FG + + +MIVVF E K LK++++ + RC F+N+ + +E Sbjct: 51 LLLLGKQGAGKSATGNTILGKAVFESRFSHHMVTKRCQSESVSVRGKQVI-VIDTPDLFSSLGCPEVQQQNLRQCLDLLADPY--VLLLVTPIGHSTEEDKKTIEGIQGVFGPQAYRHMIVVFTREDELGEDTLQNHI----ESKKYLKKLIENIGSQRCCAFNNKADKKQQE 216 HSP 2 Score: 76.2554 bits (186), Expect = 1.803e-13 Identity = 58/169 (34.32%), Postives = 82/169 (48.52%), Query Frame = 2 Query: 182 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFDFSAGSE----FVGKEIVKCIGMAKDGIHAVLXXXXXXXXXXQEEEAALHSLQTLFGKKIFDYMIVVFXXXXXXXXXXXXXXXYLGRECPKPLKEILQLCDNRCVLFDNR 676 ++L+GR+G GKSATGN+ILGR AF S+ + VTS + R L D Q + V+DTP L S G+E + KEI +C+ + V QE+EA + L+ F + I YMIV+F + K LK I + C R F+N+ Sbjct: 477 IILLGRSGVGKSATGNTILGRPAFVSQLRAQPVTSRSQSGRRTL-DWQDIVVVDTPSLNQMS-GTEKNPAQLKKEIKQCLLQNCEEGMKVFVLVFQLGRFTQEDEAVVEQLEASFEENIMKYMIVLF--TRKEDLGDGDLYDFTNNTKNKVLKRIFKKCKGRVCAFNNK 641
BLAST of FC923244 vs. ExPASy Swiss-Prot
Match: GIMA1_MOUSE (GTPase IMAP family member 1 OS=Mus musculus GN=Gimap1 PE=1 SV=3) HSP 1 Score: 77.411 bits (189), Expect = 8.094e-14 Identity = 55/173 (31.79%), Postives = 84/173 (48.55%), Query Frame = 2 Query: 182 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFDFSAGSEFVG-KEIVKCIGMAKDGIHAVLXXXXXXXXXXQEEEAALHSLQTLFGKKIFDYMIVVFXXXXXXXXXXXXXXXYLGRECPKPLKEILQLCDNRCVLFDNRLXMRPRE 697 ++LVGRTG GKSATGNSILG++ F SR + VT +C + + G V V+DTP +F G E +C ++ G HA+L Q+ + AL +++ LFGK++ +VVF Y+ + L++++ C R +NR RE Sbjct: 6 LILVGRTGTGKSATGNSILGQKCFLSRLGAVPVTRSCTLASRMWA-GWQVEVVDTPDIFSSEIPRTDPGCVETARCFVLSAPGPHALLLVTQLGRFTMQDSQ-ALAAVKRLFGKQVMARTVVVF--TRQEDLAGDSLQDYVHCTDNRALRDLVAECGGRVCALNNRATGSERE 174
BLAST of FC923244 vs. ExPASy Swiss-Prot
Match: GIMA5_MOUSE (GTPase IMAP family member 5 OS=Mus musculus GN=Gimap5 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.057e-13 Identity = 52/165 (31.52%), Postives = 84/165 (50.91%), Query Frame = 2 Query: 182 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLXXXXXXXXXXQEEEAALHSLQTLFGKKIFDYMIVVFXXXXXXXXXXXXXXXYLGRECPKPLKEILQLCDNRCVLFDNR 676 ++LVG++G GKSATGNSIL R AF+SR VT T + + T +G+ + V+DTP +F+ A ++ + K+I C + G H VL E+ A+ ++ +FG + +MIV+F ++ + L+ + Q C R F+NR Sbjct: 29 ILLVGKSGCGKSATGNSILRRPAFQSRLRGQSVTRTSQAE-TGTWEGRSILVVDTPPIFESKAQNQDMDKDIGDCYLLCAPGPH-VLLLVTQLGRFTAEDAMAVRMVKEVFGVGVMRHMIVLF--TRKEDLEEKSLEEFVTHTDNRSLRSLTQECGRRYCAFNNR 189
BLAST of FC923244 vs. ExPASy Swiss-Prot
Match: GIMA3_MOUSE (GTPase IMAP family member 3 OS=Mus musculus GN=Gimap3 PE=1 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.381e-13 Identity = 51/165 (30.91%), Postives = 85/165 (51.52%), Query Frame = 2 Query: 182 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLXXXXXXXXXXQEEEAALHSLQTLFGKKIFDYMIVVFXXXXXXXXXXXXXXXYLGRECPKPLKEILQLCDNRCVLFDNR 676 ++LVG++G GKSATGNS+L R AF+SR VT T + + T +G+ + V+DTP +F+ A ++ + K+I C + G H VL E+ A+ ++ +FG + +MIV+F ++ + L+ ++Q C R F+NR Sbjct: 25 ILLVGKSGCGKSATGNSLLRRPAFESRLRGQSVTRTSQAE-TGTWEGRSILVVDTPPIFESKAQNQDMDKDIGDCYLLCAPGPH-VLLLVTQLGRFTAEDVMAVRMVKEVFGVGVMRHMIVLF--TRKEDLAEKSLEEFVTHTDNRSLRSLVQECGRRYCAFNNR 185
BLAST of FC923244 vs. ExPASy Swiss-Prot
Match: GIMA5_RAT (GTPase IMAP family member 5 OS=Rattus norvegicus GN=Gimap5 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.169e-12 Identity = 46/128 (35.94%), Postives = 70/128 (54.69%), Query Frame = 2 Query: 167 NGERTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLXXXXXXXXXXQEEEAALHSLQTLFGKKIFDYMIVVF 550 +G ++LVG++G GKSATGNSIL R AF+SR VT T + + +G+ V+DTP +F+ ++ + K+I C M G H VL E+ A+ ++ +FG + YMIV+F Sbjct: 42 SGLLRILLVGKSGCGKSATGNSILRRPAFESRLRGQSVTRTSQAEMGTW-EGRSFLVVDTPPIFESKIQNQDMDKDIGNCYLMCAPGPH-VLLLVTQLGRYTVEDAMAVRMVKQIFGVGVMRYMIVLF 167
BLAST of FC923244 vs. ExPASy Swiss-Prot
Match: GIMA6_HUMAN (GTPase IMAP family member 6 OS=Homo sapiens GN=GIMAP6 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.441e-12 Identity = 46/123 (37.40%), Postives = 70/123 (56.91%), Query Frame = 2 Query: 182 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLXXXXXXXXXXQEEEAALHSLQTLFGKKIFDYMIVVF 550 ++L+G+TG+GKSATGNSILGR F+S+ S+ VT T + +R+ G+ + VIDTP + E V I + I ++ G HAVL E++ + LQ +FG + + I+VF Sbjct: 43 LILMGKTGSGKSATGNSILGRDVFESKLSTRPVTKTSQ-RRSREWAGKELEVIDTPNILSPQVSPE-VADAICQAIVLSAPGPHAVL-LVTQLGRFTDEDQQVVRRLQEVFGVGVLGHTILVF 162 The following BLAST results are available for this feature:
BLAST of FC923244 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923244 ID=FC923244; Name=FC923244; organism=Citrus clementina; type=EST; length=699bpback to top |