FC923251
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923251 vs. ExPASy Swiss-Prot
Match: PSMB_METTH (Proteasome subunit beta OS=Methanobacterium thermoautotrophicum GN=psmB PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.125e-25 Identity = 60/153 (39.22%), Postives = 90/153 (58.82%), Query Frame = 1 Query: 244 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEE 702 KGTTT+ K+GV+ A + RASMG I+ ++ KI +I+ ++ T+AG AD Q + L + L+ + N +IS+ A+ L ANIL+S R V T++ G DE G +Y +D GG + S GSGSP AYGVL+ Y ++ ++E Sbjct: 8 KGTTTVGITCKDGVVFATERRASMGNLIAHKATDKIFKIDEHIAATIAGSVADAQSLMKYLKAEAALYRMRNSEKISIEAAAALAANILHSSRFYPFIVQTLLGGVDENGAKIYSLDPSGGMIPDKFVSTGSGSPVAYGVLEDRYSDELYVDE 160
BLAST of FC923251 vs. ExPASy Swiss-Prot
Match: PSMB_METTE (Proteasome subunit beta OS=Methanosarcina thermophila GN=psmB PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.045e-24 Identity = 56/157 (35.67%), Postives = 101/157 (64.33%), Query Frame = 1 Query: 235 KHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFS-VGSGSPYAYGVLDSGYKFDMSIEE 702 K+ KGTTT+ + +G+++A++ RA+MG +I+S++ KK+ +I+ + T AG D Q R + ++ +L+++ +++ G + L++N L R + V +I G D+ GPG+Y +D+ GG ++ TR S GSGSP AYGVL+ Y+ +M+++E Sbjct: 5 KYLKGTTTVGVVCTDGIVLASEQRATMGHFIASKTAKKVYQIDDLVGMTTAGSVGDAQQLVRLVSVESQLYKMRRDESMTIKGITTLMSNFLSRNRYYPMMVQLLIGGVDKNGPGIYSLDAMGGSIEETRISATGSGSPMAYGVLEDQYRENMTVKE 161
BLAST of FC923251 vs. ExPASy Swiss-Prot
Match: PSMB_ARCFU (Proteasome subunit beta OS=Archaeoglobus fulgidus GN=psmB PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.854e-22 Identity = 57/154 (37.01%), Postives = 91/154 (59.09%), Query Frame = 1 Query: 244 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRF-SVGSGSPYAYGVLDSGYKFDMSIEE 702 KGTTT+ + K+GV++A + RA+MG +I+S++ KKI +I M T AG D QF R + I+ L+E+ +R+ +V + L +N+L SYR V +I G D G +Y +D GG ++ + GSGS AYGVL+ + ++ ++E Sbjct: 10 KGTTTVGLVCKDGVVMATEKRATMGNFIASKAAKKIYQIADRMAMTTAGSVGDAQFLARIIKIEANLYEIRRERKPTVRAIATLTSNLLNSYRYFPYLVQLLIGGIDSEGKSIYSIDPIGGAIEEKDIVATGSGSLTAYGVLEDRFTPEIGVDE 163
BLAST of FC923251 vs. ExPASy Swiss-Prot
Match: PSMB_METJA (Proteasome subunit beta OS=Methanocaldococcus jannaschii GN=psmB PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.109e-21 Identity = 60/155 (38.71%), Postives = 90/155 (58.06%), Query Frame = 1 Query: 244 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSEGGRLKGTRF-SVGSGSPYAYGVLDSGYKFDMSIEE 702 KGTTT+ I + V++A D RAS+G ++ + KK+ +I+ Y+ T+AG D Q R L + +L+++ R I + LL+NIL+S R +I G+D G L+ +D GG + F + GSGSP AYGVL++GY DMS+EE Sbjct: 5 KGTTTVGLICDDAVILATDKRASLGNLVADKEAKKLYKIDDYIAMTIAGSVGDAQAIVRLLIAEAKLYKMRTGRNIPPLACATLLSNILHSSRMFPFLTQIIIGGYDLLEGAKLFSLDPLGGMNEEKTFTATGSGSPIAYGVLEAGYDRDMSVEE 159
BLAST of FC923251 vs. ExPASy Swiss-Prot
Match: PSMB_PYRHO (Proteasome subunit beta OS=Pyrococcus horikoshii GN=psmB PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.560e-19 Identity = 56/153 (36.60%), Postives = 89/153 (58.17%), Query Frame = 1 Query: 244 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEE 702 KGTTT+ + K+GV++AAD RAS+G I +++V KI +I+ ++ AG D R L + +L+ + +R+SV + LLANI+ + ++ G+DE P LY VD GG + + GSG +AY +LDS YK ++++EE Sbjct: 9 KGTTTVGIVCKDGVVLAADRRASLGNIIYARNVTKIHKIDEHLAIAGAGDVGDILNLVRLLRAEAKLYYSQSGKRMSVKALATLLANIMNGAKYFPYLAWFLVGGYDEK-PKLYSVDMVGGITEDKYATAGSGMEFAYSILDSEYKDNLTLEE 160
BLAST of FC923251 vs. ExPASy Swiss-Prot
Match: PSMB_PYRAB (Proteasome subunit beta OS=Pyrococcus abyssi GN=psmB PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.461e-18 Identity = 55/153 (35.95%), Postives = 87/153 (56.86%), Query Frame = 1 Query: 244 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEE 702 KGTTT+ + +GV++AAD RAS+G + +++V KI +I+ ++ AG D R L + +L+ + +R+SV + LLAN+L R + ++ G+DE P LY VD GG + + GSG +AY VLDS Y+ D+ + E Sbjct: 9 KGTTTVGIVCSDGVVLAADRRASLGNIVYAKNVTKIHKIDEHLAIAGAGDVGDILNLVRLLRAEAKLYYAQSGKRMSVKALATLLANMLNGARMLPYLAWFLVGGFDEK-PRLYSVDMMGGITEDKYVAAGSGMEFAYSVLDSEYREDLKVRE 160
BLAST of FC923251 vs. ExPASy Swiss-Prot
Match: PB6LB_SALSA (Proteasome subunit beta type-6-B like protein OS=Salmo salar GN=psmb6l-b PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.252e-18 Identity = 59/155 (38.06%), Postives = 89/155 (57.42%), Query Frame = 1 Query: 247 GTTTLAFIFKEGVMVAADSRASMGG-YISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSEGGRLKGTRFSVG-SGSPYAYGVLDSGYKFDMSIEE 702 GTT LA F GV++ +DSRAS+GG Y+SS+++ K+I+++ + +AG AD Q + + H + + V A+ +L + Y+ + L G + AGWD + GP +Y V + GG L F++G SGS Y YG D+ YK DMS EE Sbjct: 16 GTTILAVTFNGGVIIGSDSRASIGGSYVSSKTINKLIQVHDRIFCCIAGSLADAQAVTKAAKFQISFHSIQMESPPLVKAAASVLKELCYNNKEE-LQAGFITAGWDRKKGPQVYTV-ALGGMLLSQPFTIGGSGSTYIYGYADAKYKPDMSKEE 168
BLAST of FC923251 vs. ExPASy Swiss-Prot
Match: PB6LA_SALSA (Proteasome subunit beta type-6-A like protein OS=Salmo salar GN=psmb6l-a PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.252e-18 Identity = 59/155 (38.06%), Postives = 89/155 (57.42%), Query Frame = 1 Query: 247 GTTTLAFIFKEGVMVAADSRASMGG-YISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSEGGRLKGTRFSVG-SGSPYAYGVLDSGYKFDMSIEE 702 GTT LA F GV++ +DSRAS+GG Y+SS+++ K+I+++ + +AG AD Q + + H + + V A+ +L + Y+ + L G + AGWD + GP +Y V + GG L F++G SGS Y YG D+ YK DMS EE Sbjct: 16 GTTILAVTFNGGVIIGSDSRASIGGSYVSSKTINKLIQVHDRIFCCIAGSLADAQAVTKAAKFQISFHSIQMESPPLVKAAASVLKELCYNNKEE-LQAGFITAGWDRKKGPQVYTV-ALGGMLLSQPFTIGGSGSTYIYGYADAKYKPDMSKEE 168
BLAST of FC923251 vs. ExPASy Swiss-Prot
Match: PSMB_THEAC (Proteasome subunit beta OS=Thermoplasma acidophilum GN=psmB PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.253e-18 Identity = 49/152 (32.24%), Postives = 85/152 (55.92%), Query Frame = 1 Query: 247 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEE 702 GTTT+ K+ V++A + R +M +I ++ KK+ +I+ Y T+AG D Q R + + L+ L + + + + LL+N+L + M V ++ G D T P ++ +D+ GG ++ S GSGSP+ YGVL+S Y M+++E Sbjct: 8 GTTTVGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDTYTGMTIAGLVGDAQVLVRYMKAELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGID-TAPHVFSIDAAGGSVEDIYASTGSGSPFVYGVLESQYSEKMTVDE 158
BLAST of FC923251 vs. ExPASy Swiss-Prot
Match: PSMB_PYRFU (Proteasome subunit beta OS=Pyrococcus furiosus GN=psmB PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.253e-18 Identity = 55/153 (35.95%), Postives = 87/153 (56.86%), Query Frame = 1 Query: 244 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEE 702 KGTTT+ + KEGV++AAD+RAS+G I +++V KI +I+ ++ AG D R L + L++ + +SV + LLANIL + ++ G+DE P L+ VD GG + + GSG +AY +LDS Y+ +MS+ + Sbjct: 9 KGTTTVGLVCKEGVVLAADTRASLGNIIYAKNVTKIHKIDEHLAIAGAGDVGDILNLVRLLKAEANLYKSTVGKEMSVKALATLLANILNGSKYFPYLGWFLVGGYDEK-PRLFSVDMVGGITEDNYAAAGSGMEFAYSILDSEYREEMSVND 160 The following BLAST results are available for this feature:
BLAST of FC923251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC923251 ID=FC923251; Name=FC923251; organism=Citrus clementina; type=EST; length=705bpback to top |