FC923251
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923251 vs. ExPASy Swiss-Prot
Match: PSB7_YEAST (Proteasome component PUP1 OS=Saccharomyces cerevisiae GN=PUP1 PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.866e-16 Identity = 57/178 (32.02%), Postives = 92/178 (51.69%), Query Frame = 1 Query: 199 FDEFQKDT----------KATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEE 702 FD +Q++ KAT + GTT + F GV++AAD+R++ G ++ ++ K+ I+P + AG AAD + + +G LH L R V A ++L L+ Y+G + ++AG D TG L+ + + G G S+GSGS A VL+S +K D++ EE Sbjct: 6 FDNYQRNNFLAENSHTQPKAT---STGTTIVGVKFNNGVVIAADTRSTQGPIVADKNCAKLHRISPKIWCAGAGTAADTEAVTQLIGSNIELHSLYTSREPRVVSALQMLKQHLFKYQG-HIGAYLIVAGVDPTGSHLFSIHAHGSTDVGYYLSLGSGSLAAMAVLESHWKQDLTKEE 179
BLAST of FC923251 vs. ExPASy Swiss-Prot
Match: PSMB_SULSO (Proteasome subunit beta OS=Sulfolobus solfataricus GN=psmB PE=3 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 1.158e-15 Identity = 53/156 (33.97%), Postives = 85/156 (54.49%), Query Frame = 1 Query: 235 KHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEE 702 K KGTTT+ +GV++AAD RAS G +++++ V+K++ I + T AG AD QF + L + + IS+ G + LAN+L + + V +I G+D+ P L+ +D G + + GSGSP A GVL+ Y M+++E Sbjct: 10 KILKGTTTVGIRVNDGVILAADRRASAGFFVANKMVRKVLYITDKIGITTAGSVADLQFIYDVLKNIYHYNSITKYGPISIKGIATRLANVLSATKYFPYIVQILIGGYDDQ-PRLFNLDYLGDITEENYVATGSGSPVAMGVLEDEYNPKMTLDE 164
BLAST of FC923251 vs. ExPASy Swiss-Prot
Match: PSB9_BOVIN (Proteasome subunit beta type-9 OS=Bos taurus GN=PSMB9 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.369e-15 Identity = 52/152 (34.21%), Postives = 77/152 (50.66%), Query Frame = 1 Query: 247 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEE 702 GTT +A F GV+V +DSR S G + ++ K+ ++ ++ ++G AAD Q + LH + + V A+ ++ NI Y YR LS M+AGWD+ G Y G ++ GSGS Y YG +D+ YK MS EE Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAGEAVVNRVFDKLSPLHQHIYCALSGSAADAQAIADMAAYQLELHGMELEEPPLVLAAANVVRNITYKYR-EDLSAHLMVAGWDQREGGQVYGTMSGMLIRQPFAIGGSGSTYIYGYVDAAYKPGMSPEE 170
BLAST of FC923251 vs. ExPASy Swiss-Prot
Match: PSB7_BOVIN (Proteasome subunit beta type-7 OS=Bos taurus GN=PSMB7 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.505e-15 Identity = 51/167 (30.54%), Postives = 84/167 (50.30%), Query Frame = 1 Query: 202 DEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEE 702 D +K K GTT ++K+G+++ AD+RA+ G ++ ++ KI I+P + AG AAD + + LH L+ R V A+++L +L+ Y+G + ++ G D TGP LY + G K ++GSGS A V + ++ DM EE Sbjct: 28 DFAKKGYKLPTARKTGTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLSTGRLPRVVTANRMLKQMLFRYQGY-IGAALVLGGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEE 193
BLAST of FC923251 vs. ExPASy Swiss-Prot
Match: PSB7_RAT (Proteasome subunit beta type-7 OS=Rattus norvegicus GN=Psmb7 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.280e-14 Identity = 51/167 (30.54%), Postives = 83/167 (49.70%), Query Frame = 1 Query: 202 DEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEE 702 D +K K GTT ++K+G+++ AD+RA+ G ++ ++ KI I+P + AG AAD + + LH L R V A+++L +L+ Y+G + ++ G D TGP LY + G K ++GSGS A V + ++ DM EE Sbjct: 28 DFAKKGFKLPKARKTGTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLTTGRLPRVVTANRMLKQMLFRYQGY-IGAALVLGGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEE 193
BLAST of FC923251 vs. ExPASy Swiss-Prot
Match: PSB7_MOUSE (Proteasome subunit beta type-7 OS=Mus musculus GN=Psmb7 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.280e-14 Identity = 51/167 (30.54%), Postives = 83/167 (49.70%), Query Frame = 1 Query: 202 DEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEE 702 D +K K GTT ++K+G+++ AD+RA+ G ++ ++ KI I+P + AG AAD + + LH L R V A+++L +L+ Y+G + ++ G D TGP LY + G K ++GSGS A V + ++ DM EE Sbjct: 28 DFAKKGFKLPKARKTGTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLTTGRLPRVVTANRMLKQMLFRYQGY-IGAALVLGGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEE 193
BLAST of FC923251 vs. ExPASy Swiss-Prot
Match: PSB9_RAT (Proteasome subunit beta type-9 OS=Rattus norvegicus GN=Psmb9 PE=1 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 1.672e-14 Identity = 54/153 (35.29%), Postives = 79/153 (51.63%), Query Frame = 1 Query: 247 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSV-GSGSPYAYGVLDSGYKFDMSIEE 702 GTT +A F GV+V +DSR S G + ++ K+ ++ + ++G AAD Q + LH L + V A+ ++ NI Y YR L M+AGWD+ G Y + GG L F++ GSGS Y YG +D+ YK M+ EE Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAGAAVVNRVFDKLSPLHQRIYCALSGSAADAQAIADMAAYQLELHGLELEEPPLVLAAANIVKNISYKYR-EDLLAHLMVAGWDQHEGGQVY-GTMGGMLIRQPFAIGGSGSTYIYGYVDAAYKPGMTPEE 170
BLAST of FC923251 vs. ExPASy Swiss-Prot
Match: PSB9_ONCMY (Proteasome subunit beta type-9 OS=Oncorhynchus mykiss GN=psmb9 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.672e-14 Identity = 52/153 (33.99%), Postives = 82/153 (53.59%), Query Frame = 1 Query: 247 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSV-GSGSPYAYGVLDSGYKFDMSIEE 702 GTT +A F GV++ +DSR S G + ++ + K+ ++ + ++G AAD Q + + +H + V A+ L+ NI Y Y+ LS ++AGWD+ G G YV + G L F+V GSGS Y YG +D+ Y+ MS E+ Sbjct: 18 GTTIIAIEFDGGVVLGSDSRVSAGETVVNRVMNKLSLLHDKIYCALSGSAADAQTIAEMVNYQLDVHSIEVGEDPQVRSAATLVKNISYKYK-EDLSAHLIVAGWDKRGGGQVYV-TLNGLLSRQPFAVGGSGSSYVYGFVDAEYRKAMSKED 168
BLAST of FC923251 vs. ExPASy Swiss-Prot
Match: PSB7_HUMAN (Proteasome subunit beta type-7 OS=Homo sapiens GN=PSMB7 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.672e-14 Identity = 48/152 (31.58%), Postives = 80/152 (52.63%), Query Frame = 1 Query: 247 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEE 702 GTT ++K+G+++ AD+RA+ G ++ ++ KI I+P + AG AAD + + LH L+ R V A+++L +L+ Y+G + ++ G D TGP LY + G K ++GSGS A V + ++ DM EE Sbjct: 43 GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLSTGRLPRVVTANRMLKQMLFRYQGY-IGAALVLGGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEE 193
BLAST of FC923251 vs. ExPASy Swiss-Prot
Match: PSB6_MOUSE (Proteasome subunit beta type-6 OS=Mus musculus GN=Psmb6 PE=1 SV=3) HSP 1 Score: 79.7221 bits (195), Expect = 1.672e-14 Identity = 51/153 (33.33%), Postives = 77/153 (50.33%), Query Frame = 1 Query: 247 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSV-GSGSPYAYGVLDSGYKFDMSIEE 702 GTT +A F GV++ ADSR + G YI+++ K+ I+ ++ +G AAD Q + + H + V A+ L + Y YR L G +IAGWD G Y GG + F++ GSGS Y YG +D+ Y+ M+ +E Sbjct: 33 GTTIMAVQFNGGVVLGADSRTTTGSYIANRVTDKLTPIHDHIFCCRSGSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYR-EDLMAGIIIAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKDE 184 The following BLAST results are available for this feature:
BLAST of FC923251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923251 ID=FC923251; Name=FC923251; organism=Citrus clementina; type=EST; length=705bpback to top |