FC923251
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923251 vs. ExPASy Swiss-Prot
Match: PSB9_SALSA (Proteasome subunit beta type-9 OS=Salmo salar GN=psmb9-a PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.184e-14 Identity = 52/153 (33.99%), Postives = 82/153 (53.59%), Query Frame = 1 Query: 247 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSV-GSGSPYAYGVLDSGYKFDMSIEE 702 GTT +A F GV++ +DSR S G + ++ + K+ ++ + ++G AAD Q + + +H + V A+ L+ NI Y Y+ LS ++AGWD+ G G YV + G L F+V GSGS Y YG +D+ Y+ MS E+ Sbjct: 18 GTTIIAIEFDGGVVLGSDSRVSAGETVVNRVMNKLSLLHDKIYCALSGSAADAQTIAEMVNYQLDVHSIEVGEDPQVRSAATLVKNISYKYK-EELSAHLIVAGWDKRGGGQVYV-TLNGLLSRQPFAVGGSGSAYVYGFVDAEYRKAMSKED 168
BLAST of FC923251 vs. ExPASy Swiss-Prot
Match: PSB9_HUMAN (Proteasome subunit beta type-9 OS=Homo sapiens GN=PSMB9 PE=1 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 2.184e-14 Identity = 53/153 (34.64%), Postives = 80/153 (52.29%), Query Frame = 1 Query: 247 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSV-GSGSPYAYGVLDSGYKFDMSIEE 702 GTT +A F GV++ +DSR S G + ++ K+ ++ + ++G AAD Q + LH + + V A+ ++ NI Y YR LS M+AGWD+ G Y + GG L F++ GSGS + YG +D+ YK MS EE Sbjct: 20 GTTIMAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHERIYCALSGSAADAQAVADMAAYQLELHGIELEEPPLVLAAANVVRNISYKYR-EDLSAHLMVAGWDQREGGQVY-GTLGGMLTRQPFAIGGSGSTFIYGYVDAAYKPGMSPEE 170
BLAST of FC923251 vs. ExPASy Swiss-Prot
Match: PSB7_PIG (Proteasome subunit beta type-7 OS=Sus scrofa GN=PSMB7 PE=2 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 2.184e-14 Identity = 50/167 (29.94%), Postives = 84/167 (50.30%), Query Frame = 1 Query: 202 DEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEE 702 D +K K GTT ++K+G+++ AD+RA+ G ++ ++ KI I+P + AG AAD + + LH L+ R V A+++L +L+ Y+G + ++ G D TGP LY + G K ++GSGS A V + ++ +M EE Sbjct: 28 DFAKKGYKLPTARKTGTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLSTGRLPRVVTANRMLKQMLFRYQGY-IGAALVLGGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPEMEEEE 193
BLAST of FC923251 vs. ExPASy Swiss-Prot
Match: PSB6_RAT (Proteasome subunit beta type-6 OS=Rattus norvegicus GN=Psmb6 PE=1 SV=3) HSP 1 Score: 79.337 bits (194), Expect = 2.184e-14 Identity = 51/153 (33.33%), Postives = 77/153 (50.33%), Query Frame = 1 Query: 247 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSV-GSGSPYAYGVLDSGYKFDMSIEE 702 GTT +A F GV++ ADSR + G YI+++ K+ I+ ++ +G AAD Q + + H + V A+ L + Y YR L G +IAGWD G Y GG + F++ GSGS Y YG +D+ Y+ M+ +E Sbjct: 33 GTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDHIFCCRSGSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYR-EDLMAGIIIAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKDE 184
BLAST of FC923251 vs. ExPASy Swiss-Prot
Match: PSB6_HUMAN (Proteasome subunit beta type-6 OS=Homo sapiens GN=PSMB6 PE=1 SV=4) HSP 1 Score: 78.9518 bits (193), Expect = 2.852e-14 Identity = 52/153 (33.99%), Postives = 76/153 (49.67%), Query Frame = 1 Query: 247 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSV-GSGSPYAYGVLDSGYKFDMSIEE 702 GTT +A F GV++ ADSR + G YI+++ K+ I+ + +G AAD Q + + H + V A+ L + Y YR L G +IAGWD G Y GG + F++ GSGS Y YG +D+ Y+ M+ EE Sbjct: 34 GTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCCRSGSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYR-EDLMAGIIIAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKEE 185
BLAST of FC923251 vs. ExPASy Swiss-Prot
Match: PSB6_ARATH (Proteasome subunit beta type-6 OS=Arabidopsis thaliana GN=PBA1 PE=1 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 2.852e-14 Identity = 48/163 (29.45%), Postives = 82/163 (50.31%), Query Frame = 1 Query: 217 DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSV-GSGSPYAYGVLDSGYKFDMSIEE 702 D H+ GTT + + GV++ ADSR S G Y+++++ KI ++ + +G AAD Q + H + + + +V ++ L+ + Y+ + M L G ++ GWD+ G Y GG + F++ GSGS Y YG D +K +M+ EE Sbjct: 2 DLNLDAPHSMGTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAADSQVVSDYVRYFLHQHTIQHGQPATVKVSANLIRMLAYNNKNM-LQTGLIVGGWDKYEGGKIYGIPLGGTVVEQPFAIGGSGSSYLYGFFDQAWKDNMTKEE 163
BLAST of FC923251 vs. ExPASy Swiss-Prot
Match: PSB10_HUMAN (Proteasome subunit beta type-10 OS=Homo sapiens GN=PSMB10 PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.852e-14 Identity = 50/156 (32.05%), Postives = 83/156 (53.21%), Query Frame = 1 Query: 238 HAK--GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIE 699 HA+ GTT +F++GV++ AD+RA+ ++ +S +KI I P + AG AAD + R + K LH L+ R V +++L L+ Y+G + ++ G D TGP LY V G + ++GSG A VL+ ++ +M++E Sbjct: 34 HARKTGTTIAGLVFQDGVILGADTRATNDSVVADKSCEKIHFIAPKIYCCGAGVAADAEMTTRMVASKMELHALSTGREPRVATVTRILRQTLFRYQG-HVGASLIVGGVDLTGPQLYGVHPHGSYSRLPFTALGSGQDAALAVLEDRFQPNMTLE 188
BLAST of FC923251 vs. ExPASy Swiss-Prot
Match: PSB9_MUSDU (Proteasome subunit beta type-9 OS=Mus dunni GN=Psmb9 PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.725e-14 Identity = 53/153 (34.64%), Postives = 79/153 (51.63%), Query Frame = 1 Query: 247 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSV-GSGSPYAYGVLDSGYKFDMSIEE 702 GTT +A F GV+V +DSR S G + ++ K+ ++ + ++G AAD Q + LH L + V A+ ++ NI Y YR L ++AGWD+ G Y + GG L F++ GSGS Y YG +D+ YK M+ EE Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAGAAVVNRVFDKLSPLHQRIFCALSGSAADAQAIADMAAYQLELHGLELEEPPLVLAAANVVKNISYKYR-EDLLAHLIVAGWDQREGGQVY-GTMGGMLIRQPFTIGGSGSSYIYGYVDAAYKPGMTPEE 170
BLAST of FC923251 vs. ExPASy Swiss-Prot
Match: PSB6_BOVIN (Proteasome subunit beta type-6 OS=Bos taurus GN=PSMB6 PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.725e-14 Identity = 52/153 (33.99%), Postives = 76/153 (49.67%), Query Frame = 1 Query: 247 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSV-GSGSPYAYGVLDSGYKFDMSIEE 702 GTT +A F GV++ ADSR + G YI+++ K+ I+ + +G AAD Q + + H + V A+ L + Y YR L G +IAGWD G Y GG + F++ GSGS Y YG +D+ Y+ M+ EE Sbjct: 34 GTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCCRSGSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYR-EDLMAGIIIAGWDPQEGGQVYSVPMGGMMVRQPFAIGGSGSSYIYGYVDATYREGMTKEE 185
BLAST of FC923251 vs. ExPASy Swiss-Prot
Match: PSB9_MUSPL (Proteasome subunit beta type-9 OS=Mus platythrix GN=Psmb9 PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.865e-14 Identity = 53/153 (34.64%), Postives = 79/153 (51.63%), Query Frame = 1 Query: 247 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSV-GSGSPYAYGVLDSGYKFDMSIEE 702 GTT +A F GV+V +DSR S G + ++ K+ ++ + ++G AAD Q + LH L + V A+ ++ NI Y YR L ++AGWD+ G Y + GG L F++ GSGS Y YG +D+ YK M+ EE Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAGEAVVNRVFDKLSPLHQRIFCALSGSAADAQAIADMAAYQLELHGLELEEPPLVLAAANVVKNISYKYR-EDLLAHLIVAGWDQREGGQVY-GTMGGMLIRQPFTIGGSGSSYIYGYVDAAYKPGMTSEE 170 The following BLAST results are available for this feature:
BLAST of FC923251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923251 ID=FC923251; Name=FC923251; organism=Citrus clementina; type=EST; length=705bpback to top |