FC923251
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923251 vs. ExPASy Swiss-Prot
Match: PSB6_SCHPO (Probable proteasome subunit beta type-6 OS=Schizosaccharomyces pombe GN=SPBC4C3.10c PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.865e-14 Identity = 51/153 (33.33%), Postives = 82/153 (53.59%), Query Frame = 1 Query: 247 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSV-GSGSPYAYGVLDSGYKFDMSIEE 702 GTT A +K+GV++AADSR +MG YI+++ K+ ++ + +G AAD Q L ++ + SV A+ L + + Y + M LS G ++AG+DE G Y GG L ++ GSGS + YG D+ ++ +M+ EE Sbjct: 24 GTTITALRYKDGVILAADSRTTMGAYIANRVTDKLTQLTDNIWCCRSGSAADTQTVADLLKYYLSMYRIQFGHDPSVHTAATLASEMCYQNKNM-LSAGLIVAGYDEKTGGDVYSIPLGGSLHKQPLAIGGSGSAFIYGFCDANFRENMTQEE 175
BLAST of FC923251 vs. ExPASy Swiss-Prot
Match: PSB9_ORYLA (Proteasome subunit beta type-9 OS=Oryzias latipes GN=psmb9 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.354e-14 Identity = 50/153 (32.68%), Postives = 80/153 (52.29%), Query Frame = 1 Query: 247 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSV-GSGSPYAYGVLDSGYKFDMSIEE 702 GTT +A F GV++ +DSR S G + ++ + K+ ++ + ++G AAD Q + + +H L V A+ L+ NI Y Y+ LS ++AGWD G + + GG L F++ GSGS Y YG +D+ Y+ M+ EE Sbjct: 18 GTTIIAIEFNGGVVLGSDSRVSAGDSVVNRVMNKLSPLHDKIYCALSGSAADAQTIAEMVNYQLDVHSLEIDEDPQVRSAATLVKNISYKYK-EELSAHLIVAGWDRRDGGQVFA-TLGGLLTRQPFAIGGSGSSYVYGFVDAEYRRGMTKEE 168
BLAST of FC923251 vs. ExPASy Swiss-Prot
Match: PSB9_MUSSI (Proteasome subunit beta type-9 OS=Mus spicilegus GN=Psmb9 PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.354e-14 Identity = 53/153 (34.64%), Postives = 79/153 (51.63%), Query Frame = 1 Query: 247 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSV-GSGSPYAYGVLDSGYKFDMSIEE 702 GTT +A F GV+V +DSR S G + ++ K+ ++ + ++G AAD Q + LH L + V A+ ++ NI Y YR L ++AGWD+ G Y + GG L F++ GSGS Y YG +D+ YK M+ EE Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAGTAVVNRVFDKLSPLHQRIFCALSGSAADAQAIADMAAYQLELHGLELEEPPLVLAAANVVKNISYKYR-EDLLAHLIVAGWDQREGGQVY-GTMGGMLIRQPFTIGGSGSSYIYGYVDAAYKPGMTPEE 170
BLAST of FC923251 vs. ExPASy Swiss-Prot
Match: PSB9_MUSMB (Proteasome subunit beta type-9 OS=Mus musculus bactrianus GN=Psmb9 PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.354e-14 Identity = 53/153 (34.64%), Postives = 79/153 (51.63%), Query Frame = 1 Query: 247 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSV-GSGSPYAYGVLDSGYKFDMSIEE 702 GTT +A F GV+V +DSR S G + ++ K+ ++ + ++G AAD Q + LH L + V A+ ++ NI Y YR L ++AGWD+ G Y + GG L F++ GSGS Y YG +D+ YK M+ EE Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAGTAVVNRVFDKLSPLHQRIFCALSGSAADAQAIADMAAYQLELHGLELEEPPLVLAAANVVKNISYKYR-EDLLAHLIVAGWDQREGGQVY-GTMGGMLIRQPFTISGSGSSYIYGYVDAAYKPGMTPEE 170
BLAST of FC923251 vs. ExPASy Swiss-Prot
Match: PSB9_MOUSE (Proteasome subunit beta type-9 OS=Mus musculus GN=Psmb9 PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.354e-14 Identity = 53/153 (34.64%), Postives = 79/153 (51.63%), Query Frame = 1 Query: 247 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSV-GSGSPYAYGVLDSGYKFDMSIEE 702 GTT +A F GV+V +DSR S G + ++ K+ ++ + ++G AAD Q + LH L + V A+ ++ NI Y YR L ++AGWD+ G Y + GG L F++ GSGS Y YG +D+ YK M+ EE Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAGTAVVNRVFDKLSPLHQRIFCALSGSAADAQAIADMAAYQLELHGLELEEPPLVLAAANVVKNISYKYR-EDLLAHLIVAGWDQREGGQVY-GTMGGMLIRQPFTIGGSGSSYIYGYVDAAYKPGMTPEE 170
BLAST of FC923251 vs. ExPASy Swiss-Prot
Match: PSB7_DICDI (Proteasome subunit beta type-7 OS=Dictyostelium discoideum GN=psmB7 PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.084e-13 Identity = 51/154 (33.12%), Postives = 85/154 (55.19%), Query Frame = 1 Query: 247 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKI--IEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEE 702 GTT + ++K GV++ AD+RA+ G ++ ++ +KI I N Y G AG AAD + + K +LH+L+ ++ V A +L +L+ Y+G +S ++ G D GP L+ + G + ++GSGS A V ++ YK DM+ EE Sbjct: 34 GTTIVGVVYKGGVVLGADTRATEGPIVADKNCEKIHYIADNIYCCG--AGTAADTESATALISSKLKLHKLSTGKQTRVITALTMLKQMLFKYQG-HISAALILGGIDINGPSLHTIYPHGSTDQLPYVTMGSGSLAAMAVFEAKYKNDMTKEE 184
BLAST of FC923251 vs. ExPASy Swiss-Prot
Match: PSB6_ENCCU (Probable proteasome subunit beta type-6 OS=Encephalitozoon cuniculi GN=PRE3 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.849e-13 Identity = 50/157 (31.85%), Postives = 82/157 (52.23%), Query Frame = 1 Query: 235 KHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSV-GSGSPYAYGVLDSGYKFDMSIEE 702 K GTT +A + +GV++ ADSR SMG Y+SS+ K+ +I + +G +AD Q L + ++ V A+ L + I+ Y L G ++AG+D+ P ++ + S GG L +++ GSGS + YG D ++ MS+EE Sbjct: 6 KEMTGTTIIAIKYDDGVLIGADSRTSMGAYVSSRVTDKLTQITDKIFVCRSGSSADTQMISSYLRMYLSMYSQLEDSIPQVQRAAALASKII--YENPSLLAGLIVAGYDDK-PRVFNI-SLGGSLTERDWAIGGSGSAFIYGYCDVNWRSGMSLEE 158
BLAST of FC923251 vs. ExPASy Swiss-Prot
Match: PSB10_RAT (Proteasome subunit beta type-10 OS=Rattus norvegicus GN=Psmb10 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.414e-13 Identity = 47/159 (29.56%), Postives = 80/159 (50.31%), Query Frame = 1 Query: 223 KATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIE 699 + L GTT +F++GV++ AD+RA+ ++ +S +KI I P + AG AAD + R K LH L+ R V +++L L+ Y+G + ++ G D GP LY V G + ++GSG A +L+ ++ +M++E Sbjct: 31 RVPLARKTGTTIAGLVFRDGVILGADTRATNDSVVADKSCEKIHFIAPKIYCCGAGVAADTEMTTRMAASKMELHALSTGREPRVATVTRILRQTLFRYQG-HVGASLIVGGVDLNGPQLYSVHPHGSYSRLPFTALGSGQDAAVALLEDRFQPNMTLE 188
BLAST of FC923251 vs. ExPASy Swiss-Prot
Match: PSB7B_ARATH (Proteasome subunit beta type-7-B OS=Arabidopsis thaliana GN=PBB2 PE=1 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 3.153e-13 Identity = 54/164 (32.93%), Postives = 84/164 (51.22%), Query Frame = 1 Query: 211 QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEE 702 QK KA GTT + IFK+GV++ AD+RA+ G ++ ++ +KI + P + AG AAD + + + RLH R V A LL L+SY+G +S ++ G D TGP L+ + G ++GSGS A V ++ YK ++ +E Sbjct: 27 QKGLKAPSFLKTGTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLRLHRYQTGRDSRVVTALTLLKKHLFSYQG-HVSAALVLGGVDITGPHLHTIYPHGSTDTLPFATMGSGSLAAMSVFEAKYKEGLTRDE 189
BLAST of FC923251 vs. ExPASy Swiss-Prot
Match: PSB10_BOVIN (Proteasome subunit beta type-10 OS=Bos taurus GN=PSMB10 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.153e-13 Identity = 48/156 (30.77%), Postives = 80/156 (51.28%), Query Frame = 1 Query: 238 HAK--GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIE 699 HA+ GTT +F++GV++ AD+RA+ ++ + +KI I P + AG AAD + R LH L+ R V +++L L+ Y+G + ++ G D TGP LY V G + ++GSG A VL+ ++ +M++E Sbjct: 34 HARKTGTTIAGLVFQDGVILGADTRATNDSVVADKICEKIHFIAPKIYCCGAGVAADAEMTTRMAASNMELHALSTGRECRVATVTRMLRQTLFRYQGY-VGASLIVGGVDFTGPQLYSVHPHGSYSRLPFTALGSGQDAAIAVLEDRFQPNMTLE 188 The following BLAST results are available for this feature:
BLAST of FC923251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923251 ID=FC923251; Name=FC923251; organism=Citrus clementina; type=EST; length=705bpback to top |