FC923251
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923251 vs. ExPASy Swiss-Prot
Match: PSB7A_ARATH (Proteasome subunit beta type-7-A OS=Arabidopsis thaliana GN=PBB1 PE=1 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 4.118e-13 Identity = 54/164 (32.93%), Postives = 84/164 (51.22%), Query Frame = 1 Query: 211 QKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEE 702 QK KA GTT + IFK+GV++ AD+RA+ G ++ ++ +KI + P + AG AAD + + + RLH R V A LL L+SY+G +S ++ G D TGP L+ + G ++GSGS A V ++ YK ++ +E Sbjct: 27 QKGLKAPSFLKTGTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLRLHRYQTGRDSRVITALTLLKKHLFSYQG-HVSAALVLGGVDITGPHLHTIYPHGSTDTLPFATMGSGSLAAMSVFEAKYKEGLTRDE 189
BLAST of FC923251 vs. ExPASy Swiss-Prot
Match: PSB6_TOBAC (Proteasome subunit beta type-6 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.118e-13 Identity = 49/164 (29.88%), Postives = 80/164 (48.78%), Query Frame = 1 Query: 214 KDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSV-GSGSPYAYGVLDSGYKFDMSIEE 702 ++T H+ GTT + + GV++ ADSR S G Y+++++ KI ++ + +G AAD Q + H + + +V A+ L + Y+ + L G +I GWD+ G Y GG + F++ GSGS Y YG D +K M+ EE Sbjct: 2 ENTDVDQPHSMGTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAADSQIVSDYVRYFLHQHTIQLGQPATVKVAANLTRLLSYNNKDR-LQTGMIIGGWDKYEGGKIYGIPPGGTVLEQPFAIGGSGSSYLYGFFDQAWKEGMTQEE 164
BLAST of FC923251 vs. ExPASy Swiss-Prot
Match: PSB10_MOUSE (Proteasome subunit beta type-10 OS=Mus musculus GN=Psmb10 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.118e-13 Identity = 48/156 (30.77%), Postives = 81/156 (51.92%), Query Frame = 1 Query: 238 HAK--GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIE 699 HA+ GTT +F++GV++ AD+RA+ ++ +S +KI I P + AG AAD + R K LH L+ R V +++L L+ Y+G + ++ G D GP LY V G + ++GSG A +L+ ++ +M++E Sbjct: 34 HARKTGTTIAGLVFRDGVILGADTRATNDSVVADKSCEKIHFIAPKIYCCGAGVAADTEMTTRMAASKMELHALSTGREPRVATVTRILRQTLFRYQG-HVGASLVVGGVDLNGPQLYEVHPHGSYSRLPFTALGSGQGAAVALLEDRFQPNMTLE 188
BLAST of FC923251 vs. ExPASy Swiss-Prot
Match: PSB7_SCHPO (Probable proteasome subunit beta type-7 OS=Schizosaccharomyces pombe GN=SPAC23D3.07 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.379e-13 Identity = 54/179 (30.17%), Postives = 91/179 (50.84%), Query Frame = 1 Query: 196 DFDEFQKDT----------KATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEE 702 DF+ +Q++ KAT + GTT + I K+ +++ AD+RA+ G I+ ++ KK+ I+P + AG AAD +F + LH L R+ V A +L L+ Y+G + ++ G+D GP L+ + + G K ++GSGS A VL++ Y+ D+ E Sbjct: 11 DFEYYQRNLLLQEKGFPTPKAT---STGTTIVGVIAKDCIVLGADTRATAGPIIADKNCKKLHLISPNIWCAGAGTAADTEFVTSMISSNIELHSLYTNRKPRVVTALTMLKQHLFRYQG-HIGAYLVLGGYDCKGPHLFTIAAHGSSDKLPYVALGSGSLAAISVLETKYQPDLERHE 185
BLAST of FC923251 vs. ExPASy Swiss-Prot
Match: PSB6_DICDI (Proteasome subunit beta type-6 OS=Dictyostelium discoideum GN=psmB6 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.044e-12 Identity = 50/153 (32.68%), Postives = 76/153 (49.67%), Query Frame = 1 Query: 247 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSV-GSGSPYAYGVLDSGYKFDMSIEE 702 GT+ +A + GV++ ADSR + G YI+++ KI I+ + +G AAD Q + +H V A+ L + YS + L G ++AGWD+ G Y S GG + F++ GSGS Y YG DS +K M+ +E Sbjct: 14 GTSIMAVEYDGGVIMGADSRTTTGAYIANRVTNKITPIHERIYCCRSGSAADTQAISDYVRYYLEMHTSELCDEPDVKTAASLFQLLCYSNKN-NLMAGIIVAGWDKHQGGSVYNISLGGSMVKQPFAIGGSGSTYIYGYCDSKFKPKMTKDE 165
BLAST of FC923251 vs. ExPASy Swiss-Prot
Match: PSB6_YEAST (Proteasome component PRE3 OS=Saccharomyces cerevisiae GN=PRE3 PE=1 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 3.855e-11 Identity = 45/153 (29.41%), Postives = 78/153 (50.98%), Query Frame = 1 Query: 247 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSV-GSGSPYAYGVLDSGYKFDMSIEE 702 GT+ +A FK+GV++ ADSR + G YI+++ K+ ++ + +G AAD Q + L+ + T AS + + Y + L+ G ++AG+D+ G Y GG + +++ GSGS + YG D ++ +MS EE Sbjct: 19 GTSIMAVTFKDGVILGADSRTTTGAYIANRVTDKLTRVHDKIWCCRSGSAADTQAIADIVQYHLELYTSQYGTPSTETAAS-VFKELCYENKD-NLTAGIIVAGYDDKNKGEVYTIPLGGSVHKLPYAIAGSGSTFIYGYCDKNFRENMSKEE 169 The following BLAST results are available for this feature:
BLAST of FC923251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923251 ID=FC923251; Name=FC923251; organism=Citrus clementina; type=EST; length=705bpback to top |