FC923253
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_AZOSB (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Azoarcus sp. (strain BH72) GN=gatA PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.192e-21 Identity = 58/149 (38.93%), Postives = 79/149 (53.02%), Query Frame = 3 Query: 129 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVGWF 575 PL+G+ A KD+F +G +T G+ A + A V + GA S+GKT MDE A + E+ HYG NPW R+P +LV + G+DTGGSVR PAS+ G+ G +P++G VS G+I A S D G F Sbjct: 67 PLTGIPLAHKDLFCTEGVLTTCGSKMLA--DFVSPYDAHVVSRLKDAGAVSLGKTNMDEFAMGSSNESSHYGAVRNPWDTTRIPGGSSGGSAAAVAARLVPLATGSDTGGSVRQPASHTGVTGIKPTYGVVSRYGMIAYASSLDQGGAF 213
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_NEIMA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Neisseria meningitidis serogroup A GN=gatA PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.475e-21 Identity = 59/161 (36.65%), Postives = 85/161 (52.80%), Query Frame = 3 Query: 87 EKLVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569 ++ + Q ++SA L+G+ A KDIF G + + S T+T V +L G ++G+T MDE A EN YG NPW P+ VP +L +LG+DTGGS+R PAS+CGI G +P++G+VS G++ A SFD G Sbjct: 57 DERIAQGNASA----LTGIPVAYKDIFCQTGWRSACASKMLDNFISPYTATV--VQKLLDEGMVTLGRTNMDEFAMGSTNENSFYGAAKNPWNPEHVPGGSSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQAG 211
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_ACIC5 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) GN=gatA PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.475e-21 Identity = 59/152 (38.82%), Postives = 78/152 (51.32%), Query Frame = 3 Query: 123 QLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVGWFA 578 +LP+ G+ F IKD+ V+G + T+TA V ++ GA +GK DE A + EN YG NP A DRVP + +LGTDTGGS+R PAS+CG+ G P++G VS G+I A S D VG FA Sbjct: 66 KLPMGGVPFGIKDVLTVEGMPATASSKILEGYRPPYTATA--VQRLIDAGAVLVGKLNCDEFAMGSSNENSAYGPVKNPRALDRVPGGSSGGSAAAVAANMAVATLGTDTGGSIRQPASFCGVVGVLPTYGRVSRYGLIAFASSLDRVGPFA 215
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_NEIG2 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Neisseria gonorrhoeae (strain NCCP11945) GN=gatA PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.151e-21 Identity = 58/161 (36.02%), Postives = 85/161 (52.80%), Query Frame = 3 Query: 87 EKLVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569 ++ + Q ++SA L+G+ A KDIF G + + + + TA V +L G ++G+T MDE A EN YG NPW P+ VP +L +LG+DTGGS+R PAS+CGI G +P++G+VS G++ A SFD G Sbjct: 57 DERIAQGNASA----LTGVPVAYKDIFCQTGWRSACASK--MLDNFVSPYTATVVQNLLDEGMVTLGRTNMDEFAMGSTNENSFYGAAKNPWNPEHVPGGSSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQAG 211
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_NEIMF (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=gatA PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.339e-21 Identity = 59/161 (36.65%), Postives = 85/161 (52.80%), Query Frame = 3 Query: 87 EKLVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569 ++ + Q ++SA L+G+ A KDIF G + + S T+T V +L G ++G+T MDE A EN YG NPW P+ VP +L +LG+DTGGS+R PAS+CGI G +P++G+VS G++ A SFD G Sbjct: 57 DERIAQGNASA----LTGVPVAYKDIFCQTGWRSACASKMLDNFISPYTATV--VQNLLDEGMVTLGRTNMDEFAMGSTNENSFYGAAKNPWNPEHVPGGSSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQAG 211
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_CHRSD (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=gatA PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.339e-21 Identity = 60/156 (38.46%), Postives = 76/156 (48.72%), Query Frame = 3 Query: 102 QPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569 Q +S L+GL A+KDIF G T G+ A A V + G S+GKT MDE A + EN YG NPW VP LV +LGTDTGGS+R PA++CGI G +P++G VS G++ A S D G Sbjct: 58 QARASGDAAALAGLPLALKDIFCTQGVRTSCGSK--MLDSFVAPYDATVVEKIRQAGGVSLGKTNMDEFAMGSSNENSFYGPVKNPWDLSAVPGGSSGGSAAAVAAGLVPAALGTDTGGSIRQPAAFCGITGLKPTYGRVSRYGMVAYASSLDQGG 211
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_NITOC (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=gatA PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.081e-20 Identity = 57/146 (39.04%), Postives = 75/146 (51.37%), Query Frame = 3 Query: 132 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569 ++G+ A KDIF G T G+ + A A V + + GA +GKT MDE A + E YG+ NPWA DRVP +L + GTDTGGS+R PA+ CGI G +P++G VS G+I A S D G Sbjct: 68 ITGIPLAHKDIFCTTGVKTSCGSK--MLDNFTAPYNATVVSRLKTAGAVMLGKTNMDEFAMGSSNETSFYGSVKNPWAHDRVPGGSSGGSAAAVAARLTPAATGTDTGGSIRQPAALCGITGLKPTYGRVSRYGMIAFASSLDQGG 211
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_NEIG1 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=gatA PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.081e-20 Identity = 58/161 (36.02%), Postives = 84/161 (52.17%), Query Frame = 3 Query: 87 EKLVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569 ++ + Q ++SA L+G+ A KDIF G + + + TA V +L G ++G+T MDE A EN YG NPW P+ VP +L +LG+DTGGS+R PAS+CGI G +P++G+VS G++ A SFD G Sbjct: 57 DERIAQGNASA----LTGVPVAYKDIFCQTGWRSACASK--MLDNFIFPYTATVVQNLLDEGMVTLGRTNMDEFAMGSTNENSFYGAAKNPWNPEHVPGGSSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQAG 211
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_LEGPH (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=gatA PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.081e-20 Identity = 56/150 (37.33%), Postives = 79/150 (52.67%), Query Frame = 3 Query: 129 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVGWFA 578 PL+G+ A+KD+F T + A + +T V GA IGKT MDE A + EN ++G+ NPW +RV LV F++G+DTGGS+R PA++CGI G +P++G VS G++ A S D G FA Sbjct: 66 PLTGIPMALKDLFCTKRLNTTCASKMLANFQAPYDATI--VTKFKQNGAIIIGKTNMDEFAMGSSNENSYFGSVKNPWDRERVSGGSSGGSAAAVAGNLVPFAIGSDTGGSIRQPAAFCGISGIKPTYGLVSRYGMVAFASSLDQAGPFA 213
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_MARMS (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Marinomonas sp. (strain MWYL1) GN=gatA PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.717e-20 Identity = 66/190 (34.74%), Postives = 93/190 (48.95%), Query Frame = 3 Query: 30 TLLTVAKMASRDSDYGAFM---EKLVLQPSSSAHQL-------PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569 T L +A++A D +F+ E+ L+ +++A L L+G+ A KD+F +G +T G+ ST + + GA +GKT MDE A + EN YG NPW D VP L + GTDTGGS+R PAS+CGI G +P++G VS G+I A S D G Sbjct: 24 TRLFLARIAKLDPQLNSFITVSEQHALEQAAAADVLLQSGKGTSLTGIPVAHKDLFCTEGTLTTCGSKMLHNFVPPYESTVTS--RIQQAGAVMLGKTNMDEFAMGSSNENSFYGAVKNPWNLDMVPGGSSGGSAAAIAAGLAVAATGTDTGGSIRQPASFCGITGLKPTYGRVSRFGMIAYASSLDQGG 211 The following BLAST results are available for this feature:
BLAST of FC923253 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923253 ID=FC923253; Name=FC923253; organism=Citrus clementina; type=EST; length=719bpback to top |