FC923253
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_METM7 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=gatA PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.549e-20 Identity = 62/177 (35.03%), Postives = 89/177 (50.28%), Query Frame = 3 Query: 66 SDYGAFM----EKLV-----LQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569 SD AF+ EK++ L+ + + PL G A+K +V G+ + + T A V + S GA +G T MDE A +GE ++G NP A DR+P L ++G+DTGGS+R PAS+CGI GF+PS+G VS G+ +A SFD +G Sbjct: 16 SDVNAFIDVNSEKVLKEAEELEKNDALKNKPLYGKIVAVKSNINVKGYKISCASK--TLDNYIGTYDATVVKKLRSQGALIVGMTNMDEFASGSSGETSYFGPTKNPAAMDRIPGGSSSGSAAAVAADLCDMAIGSDTGGSIRNPASHCGIVGFKPSYGVVSRQGLCDLAMSFDQIG 190
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_METAC (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanosarcina acetivorans GN=gatA PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.549e-20 Identity = 55/150 (36.67%), Postives = 77/150 (51.33%), Query Frame = 3 Query: 120 HQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569 H+ PL+G+ AIKD V G G+ A + +L GA +GKT +DE A + E +YG NPW +RVP F+LG+DTGGSVR PA++CG+ G +P++G+VS GV+ A S + VG Sbjct: 58 HEGPLAGVPIAIKDNISVVGLPNSCGSK--ILEGYVPPFNAHVIEKLLDAGAVILGKTNLDEFAMGSSTETSYYGPTANPWDLERVPGGSSGGSAAVVAAGEAPFALGSDTGGSVRCPAAFCGVVGLKPTYGAVSRYGVVAYANSLEQVG 205
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_METMP (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanococcus maripaludis GN=gatA PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.635e-20 Identity = 63/177 (35.59%), Postives = 88/177 (49.72%), Query Frame = 3 Query: 66 SDYGAFM----EKLV-----LQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569 SD AF+ EK++ L+ + + PL G A+K +V G+ + + T A V + S GA +G T MDE A +GE YG NP A DR+P L ++G+DTGGS+R PAS+CGI GF+PS+G VS G+ +A SFD +G Sbjct: 16 SDVNAFIDVNGEKVLKEAEELEKNDTLKNKPLYGKIVAVKSNINVKGYKISCASKTLEKY--VGTYDATVVKKLRSQGALIVGMTNMDEFAGGSSGETSCYGPTKNPAAMDRIPGGSSSGSAAAVAADLCDMAIGSDTGGSIRNPASHCGIVGFKPSYGVVSRQGLCDLAMSFDQIG 190
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_PROMT (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Prochlorococcus marinus (strain NATL2A) GN=gatA PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.053e-20 Identity = 64/164 (39.02%), Postives = 80/164 (48.78%), Query Frame = 3 Query: 87 EKLVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVGWFA 578 E + Q +S H PLSG+ AIKD G T + ST L L+ GA IGKT MDE A + E +G NPW +VP L SLG+DTGGS+R PAS+CG+ G +P++G VS G+I A S D VG FA Sbjct: 51 EHIDKQIASGDHLPPLSGIPIAIKDNLCTKGIKTTCASKILDNFVPPYESTVTKKL--LNAGAIMIGKTNMDEFAMGSSTETSAFGPTLNPWNITKVPGGSSGGSAASVAAGLCYGSLGSDTGGSIRQPASFCGVVGMKPTYGRVSRWGLIAFASSLDQVGPFA 212
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_PROM1 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Prochlorococcus marinus (strain NATL1A) GN=gatA PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.053e-20 Identity = 64/164 (39.02%), Postives = 80/164 (48.78%), Query Frame = 3 Query: 87 EKLVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVGWFA 578 E + Q +S H PLSG+ AIKD G T + ST L L+ GA IGKT MDE A + E +G NPW +VP L SLG+DTGGS+R PAS+CG+ G +P++G VS G+I A S D VG FA Sbjct: 51 EHIDKQIASGDHLPPLSGIPIAIKDNLCTKGIKTTCASKILDNFVPPYESTVTKKL--LNAGAIMIGKTNMDEFAMGSSTETSAFGPTLNPWNITKVPGGSSGGSAASVAAGLCYGSLGSDTGGSIRQPASFCGVVGMKPTYGRVSRWGLIAFASSLDQVGPFA 212
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_METBF (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=gatA PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.053e-20 Identity = 60/174 (34.48%), Postives = 85/174 (48.85%), Query Frame = 3 Query: 57 SRDSDYGAFMEKLVLQPSS---SAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569 S+ + Y EK + Q H PL+G+ AIKD V G G+ A + +L+ GA +GKT MDE A + E ++G NPW +RVP F+LG+DTGGSVR PA++CG+ G +P++G+VS GV+ A S + VG Sbjct: 33 SKVNGYITVSEKALEQAKKIDVEGHNGPLAGVPIAIKDNISVVGLPNSCGSK--ILEDYIPPFNAYVIEKLLAAGAVILGKTNMDEFAMGSSTETSYFGPTANPWDLERVPGGSSGGSAAVVAAGEAPFALGSDTGGSVRCPAAFCGVVGLKPTYGAVSRYGVVAYANSLEQVG 204
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_DEIGD (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Deinococcus geothermalis (strain DSM 11300) GN=gatA PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.053e-20 Identity = 58/151 (38.41%), Postives = 80/151 (52.98%), Query Frame = 3 Query: 126 LPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVGWFA 578 LPL+G+ +KD +V G T G+ A S +TA V + GA IGK MDE A + E+ +G NPW +RVP L +LG+DTGGSVR PA++ GI+G +P++G VS G++ A S D +G FA Sbjct: 65 LPLAGVPIVVKDNLNVIGTRTTCGSRILANYVSPYDATA--VERLTGAGAVIIGKANMDEFAMGSSTESSAWGPTLNPWDRERVPGGSSGGSAVAVAANLTPVALGSDTGGSVRQPAAFTGIYGLKPTYGRVSRYGLVAYASSLDQIGPFA 213
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_DEHSC (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Dehalococcoides sp. (strain CBDB1) GN=gatA PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.053e-20 Identity = 56/152 (36.84%), Postives = 76/152 (50.00%), Query Frame = 3 Query: 129 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVGWFAWD 584 PL+G+ A+KD+ G T + + A V + GA +GKT MDE A + EN Y T NPW D+VP FSLG+DTGGS+R PAS+C + G++PS+G VS G++ A S D +G F D Sbjct: 70 PLTGIPMALKDVLCTKGIRTTCSSK--MLENFVPPYNAHVVDKLAKEGAVLLGKTNMDEFAMGSSTENSAYFTTRNPWNTDKVPGGSSGGSAACVAASEAVFSLGSDTGGSIRQPASFCSVTGYKPSYGMVSRYGLVAFASSLDQIGPFTKD 219
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_DEHSB (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Dehalococcoides sp. (strain BAV1) GN=gatA PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.053e-20 Identity = 56/152 (36.84%), Postives = 76/152 (50.00%), Query Frame = 3 Query: 129 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVGWFAWD 584 PL+G+ A+KD+ G T + + A V + GA +GKT MDE A + EN Y T NPW D+VP FSLG+DTGGS+R PAS+C + G++PS+G VS G++ A S D +G F D Sbjct: 70 PLTGIPMALKDVLCTKGIRTTCSSK--MLENFVPPYNAHVVDKLAKEGAVLLGKTNMDEFAMGSSTENSAYFTTRNPWNTDKVPGGSSGGSAACVAASEAVFSLGSDTGGSIRQPASFCSVTGYKPSYGMVSRYGLVAFASSLDQIGPFTKD 219
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_THET8 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=gatA PE=3 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 7.906e-20 Identity = 62/172 (36.05%), Postives = 88/172 (51.16%), Query Frame = 3 Query: 63 DSDYGAFM---EKLVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569 D GAF+ E+L+ + + LPL+GL A+KD G T G+ +TA A L L GA +GKT +DE + E+ + NP+ PDRVP L +LG+DTGGSVR PA++CG++G +P++G VS G+I A S D +G Sbjct: 32 DPGLGAFLSLNERLLEEAEAVDPGLPLAGLVVAVKDNIATRGLRTTAGSRLLENFVPPYEATAVARLKAL--GALVLGKTNLDEFGMGSSTEHSAFFPTKNPFDPDRVPGGSSGGSAAALAADLAPLALGSDTGGSVRQPAAFCGVYGLKPTYGRVSRFGLIAYASSLDQIG 201 The following BLAST results are available for this feature:
BLAST of FC923253 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923253 ID=FC923253; Name=FC923253; organism=Citrus clementina; type=EST; length=719bpback to top |