FC923253
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_THET2 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=gatA PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.906e-20 Identity = 62/172 (36.05%), Postives = 88/172 (51.16%), Query Frame = 3 Query: 63 DSDYGAFM---EKLVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569 D GAF+ E+L+ + + LPL+GL A+KD G T G+ +TA A L L GA +GKT +DE + E+ + NP+ PDRVP L +LG+DTGGSVR PA++CG++G +P++G VS G+I A S D +G Sbjct: 32 DPGLGAFLSLNERLLEEAEAVDPGLPLAGLVVAVKDNIATRGLRTTAGSRLLENFVPPYEATAVARLKAL--GALVLGKTNLDEFGMGSSTEHSAFFPTKNPFDPDRVPGGSSGGSAAALAADLAPLALGSDTGGSVRQPAAFCGVYGLKPTYGRVSRFGLIAYASSLDQIG 201
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_METM5 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=gatA PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.906e-20 Identity = 63/177 (35.59%), Postives = 87/177 (49.15%), Query Frame = 3 Query: 66 SDYGAFM----EKLV-----LQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569 SD AF+ EK++ L+ + PL G A+K +V G+ + + T A V + S GA +G T MDE A +GE YG NP A DR+P L ++G+DTGGS+R PAS+CGI GF+PS+G VS G+ +A SFD +G Sbjct: 16 SDVNAFIDVNSEKVLKEAEELEKNDDLKNKPLYGKIVAVKSNINVKGYKISCASKTLEKY--VGTYDATVVKKLRSQGALIVGMTNMDEFAGGSSGETSCYGPTKNPAALDRIPGGSSSGSAAAVAADLCDMAIGSDTGGSIRNPASHCGIVGFKPSYGVVSRQGLCDLAMSFDQIG 190
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_AKKM8 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Akkermansia muciniphila (strain ATCC BAA-835) GN=gatA PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.906e-20 Identity = 57/167 (34.13%), Postives = 84/167 (50.30%), Query Frame = 3 Query: 72 YGAFMEKLVLQPSSSAH-QLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569 Y +F + L ++ A PL+G+ A+KD +V G T + + A A ++ + G +G+T MDE A +GEN YG NP APDR+P +LG+DTGGS+R PA +CGI G +P++G VS G++ A S D +G Sbjct: 42 YISFDREAALHAAAGADISSPLAGIPIAVKDNINVLGQPTRCASR--LLSPYVAPYDATSIRLLKEAGGIPLGRTNMDEFAMGASGENSAYGITRNPEAPDRIPGGSSSGSAAAVASATAIAALGSDTGGSIRQPAGHCGIVGLKPTYGRVSRYGLVAFASSLDQIG 206
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_METVS (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=gatA PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.033e-19 Identity = 55/157 (35.03%), Postives = 79/157 (50.32%), Query Frame = 3 Query: 99 LQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569 L+ + L G A+K +V+G+ + + T A + + S GA IG T MDE A +GE +YG NP A DR+P L +LG+DTGGS+R PAS+CG+ GF+P++G VS G+ +A SFD +G Sbjct: 36 LEKNEKLKNKSLYGKIIAVKSNINVEGYKISCASK--TLDNYTGTYDATVIKKLRSEGALIIGMTNMDEFASGSSGETSYYGPTKNPKALDRIPGGSSSGSAAAVSADLCDMALGSDTGGSIRNPASHCGVVGFKPTYGVVSRQGLCDLAMSFDQIG 190
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_DICNV (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Dichelobacter nodosus (strain VCS1703A) GN=gatA PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.033e-19 Identity = 56/155 (36.13%), Postives = 79/155 (50.97%), Query Frame = 3 Query: 114 SAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVGWFA 578 +AH PL G+ KD+F G T G+ R + T+T A L + G+ GK MDE A + E ++G NPW R+P +L+ ++ G+DTGGSVR PA+YCGI G +P++G+ S G+I A S D G A Sbjct: 67 AAHS-PLDGIPMGHKDLFCTKGIATTAGSKMLERFIPSYTATVVARLE--AAGSVLTGKLSMDEFAMGSSNERSYFGAVYNPWDEQRIPGGSSGGSAAAVAARLIPYATGSDTGGSVRQPAAYCGITGIKPTYGTCSRWGMIAYASSLDQAGVLA 218
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_THIDA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Thiobacillus denitrificans (strain ATCC 25259) GN=gatA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.349e-19 Identity = 62/185 (33.51%), Postives = 89/185 (48.11%), Query Frame = 3 Query: 129 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQL-PDDASLVRPSRVIFAEDL 680 PL+G+ A KDIF DG +T G+ A + A A + + G S+GKT MDE A + E +G NPW VP ++ + GTDTGGS+R PA+ CGI G +P++G VS G+I A S D G A + R+ V+ P D++ + + + DL Sbjct: 67 PLTGVPIAHKDIFCTDGWLTTCGSKMLA--NFVAPYDAHVIERCKAAGMPSLGKTNMDEFAMGSSNETSFFGAVKNPWNAGYVPGGSSGGAAACVAARMAPAATGTDTGGSIRQPAALCGITGLKPTYGLVSRYGMIAFASSLDQAGPMAPSAEDCARLLNVITGFDPKDSTSLEREKEDYTRDL 249
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_PARUW (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Protochlamydia amoebophila (strain UWE25) GN=gatA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.349e-19 Identity = 63/185 (34.05%), Postives = 88/185 (47.57%), Query Frame = 3 Query: 48 KMASRDSDYGAFMEKLVLQPSSSAHQLP-----------LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569 ++A D GAF+ Q A QL L+G+ AIKD V G ++ G+ T+ + A + +L+ GA IGKT MDE A + EN +NPW P +L SLG+DTGGSVR PAS+CG+ GF+P++G VS G++ S D +G Sbjct: 30 RIAKYDQKIGAFLSVYEEQAMMQAKQLDQKRLANQPLGKLAGIPIAIKDNILVKGEISTCGSK--FLTNFKSPYQASVIEYLLAEGAVIIGKTNMDEFAMGSSTENSALQKTSNPWNLKCTPGGSSGGSAAAVAGRLSPLSLGSDTGGSVRLPASFCGVVGFKPTYGRVSRFGLVAYGSSLDQIG 212
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_NEIMB (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Neisseria meningitidis serogroup B GN=gatA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.349e-19 Identity = 58/161 (36.02%), Postives = 84/161 (52.17%), Query Frame = 3 Query: 87 EKLVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569 ++ + Q ++SA L+G+ A KDIF G + + S T+T V +L G ++G+T MDE A EN YG NPW + VP +L +LG+DTGGS+R PAS+CGI G +P++G+VS G++ A SFD G Sbjct: 57 DERIAQGNASA----LTGVPVAYKDIFCQTGWRSACASKMLDNFISPYTATV--VQNLLDEGMVTLGRTNMDEFAMGSTNENSFYGAAKNPWNLEHVPGGSSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQTG 211
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_METHJ (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=gatA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.349e-19 Identity = 63/190 (33.16%), Postives = 86/190 (45.26%), Query Frame = 3 Query: 84 MEKLVLQPSSSAHQL------------PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVL 617 M+KL P S H PLSG+T A+KD G T + A V + + GA +GKT MDE EN YG NP RVP LV ++G+DTGGS+R PA++CGI G +P++G VS G+I A S + +G A D + L+ + V+ Sbjct: 1 MKKLTFHPDDSVHAFITTIPEVTYGDGPLSGVTVAVKDNISTKGIETTCASK--ILKGYIPPYDAHVVTLLKNAGAAIVGKTNMDEFGMGTTTENSAYGPTLNPLDHQRVPGGSSGGSAAAVAAGLVDCAIGSDTGGSIRCPAAFCGIVGLKPTYGRVSRFGLIAYANSLEQIGPMARDVQTLSNLYSVI 188
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_DEIDV (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=gatA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.349e-19 Identity = 58/151 (38.41%), Postives = 78/151 (51.66%), Query Frame = 3 Query: 126 LPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVGWFA 578 LPL+G+ +KD +V G T G+ A S T+TA L + GA +GK MDE A + E+ G NPW RVP L SLG+DTGGSVR PA+ G++G +P++G VS G++ A S D +G FA Sbjct: 65 LPLAGVPVIVKDNINVSGTRTTCGSRILATYVSPYTATAAQRL--IDAGAVIVGKANMDEFAMGSSTESSASGPTLNPWDLSRVPGGSSGGSAVAVAANLTPVSLGSDTGGSVRQPAALTGVYGLKPTYGRVSRYGLVAYASSLDQIGPFA 213 The following BLAST results are available for this feature:
BLAST of FC923253 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923253 ID=FC923253; Name=FC923253; organism=Citrus clementina; type=EST; length=719bpback to top |