FC923253
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_SALRD (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Salinibacter ruber (strain DSM 13855) GN=gatA PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.761e-19 Identity = 54/147 (36.73%), Postives = 76/147 (51.70%), Query Frame = 3 Query: 129 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569 PL+GL A+KD + G+ G+ A S +T + + GA IGKT DE A + E H+G NP AP+ VP L +LG+DTGGSVR PA++CG G +P++G VS +G++ A S D +G Sbjct: 67 PLAGLVLAVKDNICIRGYPVSCGSKMLADFSSLYDATV--IDRLRDAGAIFIGKTNCDEFAMGSSNETSHFGPVRNPHAPEYVPGGSSGGSAAAVAAGLCHAALGSDTGGSVRQPAAFCGTVGLKPTYGRVSRSGLVAFASSLDVIG 211
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_PROM5 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Prochlorococcus marinus (strain MIT 9515) GN=gatA PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.761e-19 Identity = 59/162 (36.42%), Postives = 82/162 (50.62%), Query Frame = 3 Query: 84 MEKLVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569 ++KL+ S++ PL+G+ AIKD G VT + S ST L S G +GKT +DE A + E +GT +NPW RVP L S+G+DTGGS+R PAS+CG+ G +P++G VS G+I A S D +G Sbjct: 53 IDKLI---SNNEQLPPLAGIPIAIKDNICTKGVVTSCSSKMLQDFVSPYESTVSGKL--WSSGGIFLGKTNLDEFAMGSSTETSVFGTTSNPWDTKRVPGGSSGGSAASVAAGLCAASIGSDTGGSIRQPASFCGVVGLKPTYGRVSRWGLIAFASSLDQIG 209
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_PELCD (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=gatA PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.761e-19 Identity = 63/186 (33.87%), Postives = 91/186 (48.92%), Query Frame = 3 Query: 42 VAKMASRDSDYGAFM---EKLVLQPSSSA-------HQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569 + ++A D GAF+ E+ L+ + +A + L+G+ A+KDIF +G T + + + AV + A +GK MDE A + EN +GT NPW D VP + +LGTDTGGS+R PAS+CG+ G +P++G VS GVI A S D VG Sbjct: 30 LTRIADTDQRIGAFITQSEEAALKNAEAADARLAAGNAASLTGIPLALKDIFITEGMRTTCASR--ILDNFVPPYSGTAVRKLQEQDAVILGKLNMDEFAMGSSNENSAFGTVKNPWNQDCVPGGSSGGSAACVAARQAVATLGTDTGGSIRQPASHCGVVGLKPTYGRVSRYGVIAYASSLDQVG 213
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_HAHCH (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Hahella chejuensis (strain KCTC 2396) GN=gatA PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.761e-19 Identity = 53/149 (35.57%), Postives = 76/149 (51.01%), Query Frame = 3 Query: 132 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVGWFA 578 L+G+ A KD+F +G T G+ + ST + GA ++GKT MDE A + EN ++G NPW +R P L + GTDTGGS+R PA++CG+ G +P++G VS G++ A S D G FA Sbjct: 68 LNGVPLAHKDVFCTEGVTTTCGSRMLEKFVPPYESTVTRKF--IDAGAVTLGKTNMDEFAMGSSNENSYFGPVRNPWDTERAPGGSSGGSAAAVAAGLCAAATGTDTGGSIRQPAAFCGLTGLKPTYGRVSRLGMVAFASSLDQGGPFA 214
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_EUBE2 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=gatA PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.761e-19 Identity = 56/147 (38.10%), Postives = 76/147 (51.70%), Query Frame = 3 Query: 129 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569 PL+G+ FAIKD +G +T + + T TA AV + + GA IGKT MDE A E +G NP P+ VP +LG+DTGGS+R PASYCG+ G +P++G+VS G+I S D +G Sbjct: 70 PLAGVPFAIKDNMCTEGMLTTCSSKILG--NFVPTYTADAVERLQNAGAVIIGKTNMDEFAMGSTTETSAFGATKNPRNPEHVPGGSSGGSAAAVAANECFAALGSDTGGSIRQPASYCGVVGLKPTYGTVSRYGLIAYGSSLDQIG 214
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_DESAH (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) GN=gatA PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.761e-19 Identity = 60/190 (31.58%), Postives = 92/190 (48.42%), Query Frame = 3 Query: 30 TLLTVAKMASRDSDYGAFME---KLVLQPSSSAHQ-------LPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569 T + ++ + D+D GAF+ L+ +++A + PL G+ A+KD+ G T + + T A AV + GA +GKT +DE + EN + NPW D VP ++ +LGTDTGGS+R PAS+CG+ G +PS+G VS G++ A S D +G Sbjct: 26 TTCLLDRIKTHDADLGAFITVDAAGALEAATAADERIARGEDAPLLGIPLALKDLLCTSGVRTTCASK--ILENFVPTYDATAVTLLKQAGAVIVGKTNLDEFGMGSSTENSAFHLTRNPWNLDHVPGGSSGGSAAAVAARMCTAALGTDTGGSIRQPASHCGVVGLKPSYGRVSRFGMVAYASSLDQIG 213
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_RALEH (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=gatA PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.300e-19 Identity = 55/147 (37.41%), Postives = 74/147 (50.34%), Query Frame = 3 Query: 129 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569 PL+G+ A KD+F G G+ A S +T +A + G ++GKT MDE A + EN H+G NPW RVP L + GTDTGGS+R P+S+ GI G +P++G VS G+I A S D G Sbjct: 71 PLTGVPIAHKDVFVTRGWRATAGSKMLANYESPFDATVVERMA--AAGMVTLGKTNMDEFAMGSSNENSHFGPVRNPWDTSRVPGGSSGGSAAAVAAGLAPAATGTDTGGSIRQPSSFSGITGIKPTYGRVSRYGMIAFASSLDQAG 215
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_METM6 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=gatA PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.004e-19 Identity = 61/177 (34.46%), Postives = 87/177 (49.15%), Query Frame = 3 Query: 66 SDYGAFM----EKLV-----LQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569 SD AF+ EK++ L+ + PL G A+K +V G+ + + T A V + GA +G T MDE A +GE ++G NP A DR+P L ++G+DTGGS+R PAS+CGI GF+PS+G VS G+ +A SFD +G Sbjct: 16 SDVNAFIDVNSEKVLKEAEELEKNDYLKNKPLYGKIVAVKSNINVKGYKISCASKTLEKY--TGTYDATVVKKLRLQGALIVGMTNMDEFASGSSGETSYFGPTKNPAAMDRIPGGSSSGSAAAVAADLCDMAIGSDTGGSIRNPASHCGIVGFKPSYGVVSRQGLCDLAMSFDQIG 190
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_COXBU (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Coxiella burnetii GN=gatA PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.004e-19 Identity = 61/177 (34.46%), Postives = 81/177 (45.76%), Query Frame = 3 Query: 39 TVAKMASRDSDYGAFMEKLVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569 T+ S +Y K + L+G+ A KDIF T G+ + A A V + GA IGKT MDE A + EN ++G NPW +RVP +LV + GTDTGGS+R PA+ CGI G +P++G VS G+I A S D G Sbjct: 37 TLNSFISITEEYALTQAKAADARLAKGEATSLTGIPIAQKDIFCTKDIKTSCGSK--MLDNFIAPYDATVVEQLNKAGAILIGKTNMDEFAMGSSNENSYFGAVKNPWDLERVPGGSSGGSAAAVAARLVPGATGTDTGGSIRQPAALCGITGLKPTYGRVSRYGMIAFASSLDQAG 211
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_COXBR (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=gatA PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.004e-19 Identity = 61/177 (34.46%), Postives = 81/177 (45.76%), Query Frame = 3 Query: 39 TVAKMASRDSDYGAFMEKLVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569 T+ S +Y K + L+G+ A KDIF T G+ + A A V + GA IGKT MDE A + EN ++G NPW +RVP +LV + GTDTGGS+R PA+ CGI G +P++G VS G+I A S D G Sbjct: 37 TLNSFISITEEYALTQAKAADARLAKGEATSLTGIPIAQKDIFCTKDIKTSCGSK--MLDNFIAPYDATVVEQLNKAGAILIGKTNMDEFAMGSSNENSYFGAVKNPWDLERVPGGSSGGSAAAVAARLVPGATGTDTGGSIRQPAALCGITGLKPTYGRVSRYGMIAFASSLDQAG 211 The following BLAST results are available for this feature:
BLAST of FC923253 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923253 ID=FC923253; Name=FC923253; organism=Citrus clementina; type=EST; length=719bpback to top |