FC923253
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_GRABC (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=gatA PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.217e-13 Identity = 52/157 (33.12%), Postives = 72/157 (45.86%), Query Frame = 3 Query: 132 LSGLTFAIKDIFDVDGHVTGFGN---PDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDR-----VPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVGWFA 578 L+G+ A KD+F +G T G+ ++ + +A + +L GA +GK +DE A YG NPW VP L + GTDTGGS+R PASYCGI G +P++G S G++ A S D G FA Sbjct: 71 LTGIPVASKDMFCSEGIRTTAGSRILENFVPPYESAVTER-----MLRDGAVILGKANLDEFAMGSANLTSAYGPVENPWKRHDDDAVLVPGGSSGGSAAAVAAHLALGATGTDTGGSIRQPASYCGIAGIKPTYGRCSRWGIVAYASSLDQAGPFA 222
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_CAMC1 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Campylobacter concisus (strain 13826) GN=gatA PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.217e-13 Identity = 52/177 (29.38%), Postives = 79/177 (44.63%), Query Frame = 3 Query: 60 RDSDYGAFMEKLVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSA-------ATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569 ++ + GA++E+L + + G+ AIKD V G W+ T ++ A A + +LS G+T MDE A E+ YG NP VP L +LG+DTGGS+R PA++CG G +P++G VS G+ + S D +G Sbjct: 28 KEKELGAYVEQLANLEIAKLGE----GVPIAIKDNIQVKG---------WSVTSASKILQGYVAPYNATVIEKLLSKNLAPFGRTNMDEFAMGSTTESSFYGKTLNPLNHAHVPGGSSGGSAAAVAAGLAVAALGSDTGGSIRQPAAFCGCVGLKPTYGRVSRYGLGAYSSSLDQIG 191
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_BREBN (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=gatA PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.217e-13 Identity = 35/96 (36.46%), Postives = 52/96 (54.17%), Query Frame = 3 Query: 282 IGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569 + K MDE A + EN + NPW D VP + ++LG+DTGGS+R PA++CG+ G +P++G VS G++ A S D +G Sbjct: 120 VAKLNMDEFAMGGSNENSGFFPAKNPWNTDYVPGGSSGGSAAAMAARHFYYTLGSDTGGSIRQPAAFCGVVGLKPTYGRVSRFGLVAFASSLDQIG 215
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_STAAU (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Staphylococcus aureus GN=gatA PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.202e-13 Identity = 40/99 (40.40%), Postives = 52/99 (52.53%), Query Frame = 3 Query: 273 ATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569 A IGK MDE A + E NP+ VP LV FSLG+DTGGS+R PA+YCG+ G +P++G VS G++ A S D +G Sbjct: 116 AVLIGKLNMDEFAMGGSTETSISKKTVNPFDHKAVPGGSSGGSAAAVAAGLVPFSLGSDTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIG 214
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_HELPJ (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Helicobacter pylori J99 GN=gatA PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.202e-13 Identity = 57/176 (32.39%), Postives = 76/176 (43.18%), Query Frame = 3 Query: 60 RDSDYGAFMEKLVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSA-------ATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTV 566 R SD A+++ L +S+ G+ IKD V G W T S+ A A A+ + G G + MDE A E+ YG NP + VP L +LG+DTGGS+R PASYCG G +P++G VS GVI SFD + Sbjct: 27 RASDLNAYIKAPSLNGASA------KGVPILIKDNISVKG---------WEITCSSKILEGYVAPYHASAIENLHQNGMAGFGLSNMDEFAMGSTTESSCYGITKNPRDKNIVPGGSSGGSAAAVAGGLTVAALGSDTGGSIRQPASYCGCVGLKPTYGRVSRYGVIAYRSSFDQI 187
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_EHRRG (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Ehrlichia ruminantium (strain Gardel) GN=gatA PE=3 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 4.202e-13 Identity = 50/150 (33.33%), Postives = 68/150 (45.33%), Query Frame = 3 Query: 132 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDR----VPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569 L+G+ IKD+F T + ST V ++ GA +GK MDE A + N +G NPW VP L +LG+DTGGSVR PA++CGI G +P++G S +G+I A S D G Sbjct: 71 LTGIPVGIKDLFCTKNIKTTACSNILRNFTPQYDSTV--VKRLIDDGAVMLGKLNMDEFAMGSSNSNSCFGPVENPWTRADGVKVVPGGSSGGSSAAVAGFLCAGALGSDTGGSVRQPAAFCGIVGLKPTYGRCSRSGMIAFASSLDQAG 218
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_COREF (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Corynebacterium efficiens GN=gatA PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.202e-13 Identity = 39/100 (39.00%), Postives = 51/100 (51.00%), Query Frame = 3 Query: 270 GATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569 G +GKT MDE A + EN YG NPW +R P ++GTDTGGS+R PA+ G +P++G+VS G+I A S D VG Sbjct: 127 GIPILGKTNMDEFAMGSSTENSAYGATRNPWDLERTPGGSGGGSSAALASGEAPLAIGTDTGGSIRQPAALTNTVGVKPTYGTVSRYGLIACASSLDQVG 226
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: AMI4_MYCTU (Putative amidase amiD OS=Mycobacterium tuberculosis GN=amiD PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.202e-13 Identity = 51/146 (34.93%), Postives = 67/146 (45.89%), Query Frame = 3 Query: 132 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569 L G+ +KD+ T G + A +T A L + GA IGK M E AY G + TP NPW P L S+G+DTGGS+R P S CG+ G +P+ G VS GV+ +A S+D VG Sbjct: 85 LHGVPIGVKDLCYTVDAPTAAGTTIFRDFRPAYDATVVARLR--AAGAVIIGKLAMTEGAYL--GYHPSLPTPVNPWDPTAWAGVSSSGCGVATAAGLCFGSIGSDTGGSIRFPTSMCGVTGIKPTWGRVSRHGVVELAASYDHVG 226
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: AMI4_MYCBO (Putative amidase amiD OS=Mycobacterium bovis GN=amiD PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.202e-13 Identity = 51/146 (34.93%), Postives = 67/146 (45.89%), Query Frame = 3 Query: 132 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569 L G+ +KD+ T G + A +T A L + GA IGK M E AY G + TP NPW P L S+G+DTGGS+R P S CG+ G +P+ G VS GV+ +A S+D VG Sbjct: 85 LHGVPIGVKDLCYTVDAPTAAGTTIFRDFRPAYDATVVARLR--AAGAVIIGKLAMTEGAYL--GYHPSLPTPVNPWDPTAWAGVSSSGCGVATAAGLCFGSIGSDTGGSIRFPTSMCGVTGIKPTWGRVSRHGVVELAASYDHVG 226
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_RICBR (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Rickettsia bellii (strain RML369-C) GN=gatA PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.488e-13 Identity = 53/170 (31.18%), Postives = 73/170 (42.94%), Query Frame = 3 Query: 102 QPSSSAHQLPLSGLTFAIKDIFDVDG-HVTGFGN------PDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPW-----APDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVGWF 575 Q + H L G+ FA KD+F G T N P++ S T + + G +GKT MDE A +G +PW D VP + +LG+DTGGSVR PAS+ G+ GF+P++G S G++ A S D G F Sbjct: 60 QSYAKNHSRTLEGIPFAAKDLFCTKGIRTTACSNILREFIPNY---ESGVTQN------IFNKGGVMLGKTNMDEFAMGSANITSCFGNVISPWKALDDGADLVPGGSSGGSAAAVSGFMATAALGSDTGGSVRQPASFTGLVGFKPTYGRCSRYGMVSFASSLDQAGIF 220 The following BLAST results are available for this feature:
BLAST of FC923253 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923253 ID=FC923253; Name=FC923253; organism=Citrus clementina; type=EST; length=719bpback to top |