FC923253
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_COXBN (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Coxiella burnetii (strain Dugway 5J108-111) GN=gatA PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.004e-19 Identity = 61/177 (34.46%), Postives = 81/177 (45.76%), Query Frame = 3 Query: 39 TVAKMASRDSDYGAFMEKLVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569 T+ S +Y K + L+G+ A KDIF T G+ + A A V + GA IGKT MDE A + EN ++G NPW +RVP +LV + GTDTGGS+R PA+ CGI G +P++G VS G+I A S D G Sbjct: 37 TLNSFISITEEYALTQAKAADARLAKGEATSLTGIPIAQKDIFCTKDIKTSCGSK--MLDNFIAPYDATVVEQLNKAGAILIGKTNMDEFAMGSSNENSYFGAVKNPWDLERVPGGSSGGSAAAVAARLVPGATGTDTGGSIRQPAALCGITGLKPTYGRVSRYGMIAFASSLDQAG 211
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_COXB2 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Coxiella burnetii (strain CbuG_Q212) GN=gatA PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.004e-19 Identity = 61/177 (34.46%), Postives = 81/177 (45.76%), Query Frame = 3 Query: 39 TVAKMASRDSDYGAFMEKLVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569 T+ S +Y K + L+G+ A KDIF T G+ + A A V + GA IGKT MDE A + EN ++G NPW +RVP +LV + GTDTGGS+R PA+ CGI G +P++G VS G+I A S D G Sbjct: 37 TLNSFISITEEYALTQAKAADARLAKGEATSLTGIPIAQKDIFCTKDIKTSCGSK--MLDNFIAPYDATVVEQLNKAGAILIGKTNMDEFAMGSSNENSYFGAVKNPWDLERVPGGSSGGSAAAVAARLVPGATGTDTGGSIRQPAALCGITGLKPTYGRVSRYGMIAFASSLDQAG 211
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_COXB1 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Coxiella burnetii (strain CbuK_Q154) GN=gatA PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.004e-19 Identity = 61/177 (34.46%), Postives = 81/177 (45.76%), Query Frame = 3 Query: 39 TVAKMASRDSDYGAFMEKLVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569 T+ S +Y K + L+G+ A KDIF T G+ + A A V + GA IGKT MDE A + EN ++G NPW +RVP +LV + GTDTGGS+R PA+ CGI G +P++G VS G+I A S D G Sbjct: 37 TLNSFISITEEYALTQAKAADARLAKGEATSLTGIPIAQKDIFCTKDIKTSCGSK--MLDNFIAPYDATVVEQLNKAGAILIGKTNMDEFAMGSSNENSYFGAVKNPWDLERVPGGSSGGSAAAVAARLVPGATGTDTGGSIRQPAALCGITGLKPTYGRVSRYGMIAFASSLDQAG 211
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_CHLAD (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=gatA PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.004e-19 Identity = 56/151 (37.09%), Postives = 73/151 (48.34%), Query Frame = 3 Query: 129 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVGWFAW 581 PL G+ IKD+ +G T G+ A +T + +L+ G IGK DE A + EN Y TNPW RVP V +LGTDTGGS+R PA+ CGI G +P++G VS G+I S D +G AW Sbjct: 71 PLDGIPIGIKDVICTNGVPTTAGSRILAGFRPPYNATV--IERLLAAGTVLIGKLNCDEFAMGSSTENSAYQITTNPWDTSRVPGGSSGGSAAAVAAGQVPATLGTDTGGSIRQPAALCGISGLKPTYGRVSRYGLIAYGSSLDQIGPMAW 219
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_BORPD (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=gatA PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.004e-19 Identity = 55/147 (37.41%), Postives = 73/147 (49.66%), Query Frame = 3 Query: 129 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569 PL+G+ A KD F G T G+ A+ A V + + GA S+GK DE A EN YG NPW P+ VP +LV + GTDTGGSVR PA+ CG+ G +P++G+VS G++ S D G Sbjct: 73 PLAGVPIAHKDAFVTRGWRTTAGSK--MLEGYASPFDATVVQRLQAAGAVSLGKLNCDEFAMGSANENSAYGPVRNPWDPNAVPGGSSGGSAAAVAARLVAAATGTDTGGSVRQPAALCGVSGIKPTYGTVSRYGIVAFGSSLDQAG 217
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_ACIBY (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Acinetobacter baumannii (strain AYE) GN=gatA PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.004e-19 Identity = 55/146 (37.67%), Postives = 73/146 (50.00%), Query Frame = 3 Query: 132 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569 L+G+ A KDIF G T G+ S +T V + G ++GK MDE A E+ + G +NPWA D VP L F+ GTDTGGS+R PAS+CG+ G +P++G VS G+I A S D G Sbjct: 71 LTGIPLAHKDIFCTKGIKTTAGSKMLDNFISPYDATV--VEKTKAAGLVTLGKVNMDEFAMGSTSESSYVGATSNPWALDHVPGGSSGGSAAAVAADLAPFATGTDTGGSIRQPASFCGLTGLKPTYGRVSRFGIIAYASSLDQAG 214
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_ACIBT (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=gatA PE=3 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 3.004e-19 Identity = 55/146 (37.67%), Postives = 73/146 (50.00%), Query Frame = 3 Query: 132 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569 L+G+ A KDIF G T G+ S +T V + G ++GK MDE A E+ + G +NPWA D VP L F+ GTDTGGS+R PAS+CG+ G +P++G VS G+I A S D G Sbjct: 71 LTGIPLAHKDIFCTKGIKTTAGSKMLDNFISPYDATV--VEKTKAAGLVTLGKVNMDEFAMGSTSESSYVGATSNPWALDHVPGGSSGGSAAAVAADLAPFATGTDTGGSIRQPASFCGLTGLKPTYGRVSRFGIIAYASSLDQAG 214
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_ACIBS (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Acinetobacter baumannii (strain SDF) GN=gatA PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.004e-19 Identity = 55/146 (37.67%), Postives = 73/146 (50.00%), Query Frame = 3 Query: 132 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569 L+G+ A KDIF G T G+ S +T V + G ++GK MDE A E+ + G +NPWA D VP L F+ GTDTGGS+R PAS+CG+ G +P++G VS G+I A S D G Sbjct: 71 LTGIPLAHKDIFCTKGIKTTAGSKMLDNFISPYDATV--VEKTKAAGLVTLGKVNMDEFAMGSTSESSYVGATSNPWALDHVPGGSSGGSAAAVAADLAPFATGTDTGGSIRQPASFCGLTGLKPTYGRVSRFGIIAYASSLDQAG 214
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_ACIBC (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Acinetobacter baumannii (strain ACICU) GN=gatA PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.004e-19 Identity = 55/146 (37.67%), Postives = 73/146 (50.00%), Query Frame = 3 Query: 132 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569 L+G+ A KDIF G T G+ S +T V + G ++GK MDE A E+ + G +NPWA D VP L F+ GTDTGGS+R PAS+CG+ G +P++G VS G+I A S D G Sbjct: 71 LTGIPLAHKDIFCTKGIKTTAGSKMLDNFISPYDATV--VEKTKAAGLVTLGKVNMDEFAMGSTSESSYVGATSNPWALDHVPGGSSGGSAAAVAADLAPFATGTDTGGSIRQPASFCGLTGLKPTYGRVSRFGIIAYASSLDQAG 214
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_ACIB5 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Acinetobacter baumannii (strain AB0057) GN=gatA PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.004e-19 Identity = 55/146 (37.67%), Postives = 73/146 (50.00%), Query Frame = 3 Query: 132 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569 L+G+ A KDIF G T G+ S +T V + G ++GK MDE A E+ + G +NPWA D VP L F+ GTDTGGS+R PAS+CG+ G +P++G VS G+I A S D G Sbjct: 71 LTGIPLAHKDIFCTKGIKTTAGSKMLDNFISPYDATV--VEKTKAAGLVTLGKVNMDEFAMGSTSESSYVGATSNPWALDHVPGGSSGGSAAAVAADLAPFATGTDTGGSIRQPASFCGLTGLKPTYGRVSRFGIIAYASSLDQAG 214 The following BLAST results are available for this feature:
BLAST of FC923253 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923253 ID=FC923253; Name=FC923253; organism=Citrus clementina; type=EST; length=719bpback to top |