FC923253
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_ACIB3 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Acinetobacter baumannii (strain AB307-0294) GN=gatA PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.004e-19 Identity = 55/146 (37.67%), Postives = 73/146 (50.00%), Query Frame = 3 Query: 132 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569 L+G+ A KDIF G T G+ S +T V + G ++GK MDE A E+ + G +NPWA D VP L F+ GTDTGGS+R PAS+CG+ G +P++G VS G+I A S D G Sbjct: 71 LTGIPLAHKDIFCTKGIKTTAGSKMLDNFISPYDATV--VEKTKAAGLVTLGKVNMDEFAMGSTSESSYVGATSNPWALDHVPGGSSGGSAAAVAADLAPFATGTDTGGSIRQPASFCGLTGLKPTYGRVSRFGIIAYASSLDQAG 214
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_ACIAD (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Acinetobacter sp. (strain ADP1) GN=gatA PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.004e-19 Identity = 56/146 (38.36%), Postives = 74/146 (50.68%), Query Frame = 3 Query: 132 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569 L+G+ A KDIF G T G+ S +T V + G ++GK MDE A E+ ++G NPWA DRVP L F+ GTDTGGS+R PAS+CG+ G +P++G VS G+I A S D G Sbjct: 71 LTGVPLAHKDIFCTKGIKTTAGSKMLDNFISPYNATV--VEKANAAGLVTLGKLNMDEFAMGSTSESSYFGATCNPWALDRVPGGSSGGSAAAVAADLAPFATGTDTGGSIRQPASFCGLTGLKPTYGRVSRFGMIAYASSLDQGG 214
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_EUBR3 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Eubacterium rectale (strain ATCC 33656 / VPI 0990) GN=gatA PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.924e-19 Identity = 59/172 (34.30%), Postives = 85/172 (49.42%), Query Frame = 3 Query: 75 GAFMEKLVLQPSSSAHQLP--LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVGWFAWD 584 GA + +Q A +L L+G+ AIKD +G +T + + T TA AV + G +GKT MDE A E +G NPW + VP + V F+LG+DTGGS+R P+S+CG+ G +P++G+VS G+I S D +G A D Sbjct: 50 GALKKAAEVQAKIDAGELKGALAGVPVAIKDNMCTEGLLTTCSSK--ILYNFIPTYTAEAVKRLEDAGCVIVGKTNMDEFAMGSTTETSAFGATKNPWNTEHVPGGSSGGSCAAVAAEEVPFALGSDTGGSIRQPSSFCGVTGIKPTYGTVSRYGLIAYGSSLDQIGPIAKD 219
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_BORPE (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bordetella pertussis GN=gatA PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.924e-19 Identity = 57/147 (38.78%), Postives = 71/147 (48.30%), Query Frame = 3 Query: 129 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569 PL+G+ A KD F G T G+ A S +T LA GA S+GK DE A EN YG NPW VP +LV + GTDTGGSVR PA+ CG+ G +P++G+VS G+I S D G Sbjct: 73 PLAGIPIAHKDAFVTRGWRTTAGSKMLAGYASPFDATVVERLA--EAGAVSLGKLNCDEFAMGSGNENSAYGPVRNPWDTQAVPGGSSGGSAAAVAARLVAAATGTDTGGSVRQPAALCGVSGIKPTYGTVSRYGIIAFGSSLDQAG 217
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_RALME (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=gatA PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.125e-19 Identity = 56/147 (38.10%), Postives = 75/147 (51.02%), Query Frame = 3 Query: 129 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569 PL+G+ A KD+F G + G+ A S +T LA + G ++GKT MDE A + EN +G +NPW RVP L + GTDTGGS+R PAS+ GI G +P++G VS G+I A S D G Sbjct: 71 PLTGVPIAHKDVFVTRGWKSTAGSKMLANYESPFDATVVERLA--AAGMVTLGKTNMDEFAMGSSNENSFFGPVSNPWDTSRVPGGSSGGSAAAVAAGLAPAATGTDTGGSIRQPASFSGITGIKPTYGRVSRYGMIAFASSLDQGG 215
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_PSYWF (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Psychrobacter sp. (strain PRwf-1) GN=gatA PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.125e-19 Identity = 56/148 (37.84%), Postives = 74/148 (50.00%), Query Frame = 3 Query: 132 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVGWF 575 L GL A KD+F G +T G+ S +T V + GA +GK MDE A + E+ +YG NPW RVP V F+ G+DTGGS+R PAS+CG+ G +P++G VS G+I A S D G F Sbjct: 71 LLGLPMAHKDLFCTKGLLTTSGSKILHNFVSPYDATI--VSNIREAGAVCLGKLNMDEFAMGSDNESSYYGAVHNPWDLSRVPGGSSGGSAAAVAAGFVPFATGSDTGGSIRQPASFCGLTGIKPTYGRVSRFGMIAYASSLDQAGTF 216
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_METST (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanosphaera stadtmanae (strain DSM 3091) GN=gatA PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.125e-19 Identity = 51/151 (33.77%), Postives = 76/151 (50.33%), Query Frame = 3 Query: 132 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVGWFAWD 584 L+GL IK +V+ + +P + + +T + +L IG T MDE A + E YG NP AP +P + +LG+DTGGS+R PAS+CG+ GF+P++G VS G++ +A S D +G FA D Sbjct: 66 LAGLVIGIKSNINVEDFIISAASPTLKNYYGSYNATV--INRILDEDGVIIGLTNMDEFAAGSSTETSMYGPTNNPKAPGHIPGGSSGGSAAAIAANMCDITLGSDTGGSIRNPASHCGVMGFKPTYGMVSRQGLLDLAMSLDQIGPFAND 214
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_METJA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanocaldococcus jannaschii GN=gatA PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.125e-19 Identity = 53/157 (33.76%), Postives = 77/157 (49.04%), Query Frame = 3 Query: 99 LQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569 L+ A + PL G +K +V+G+ + + A A + + G IG MDE A +GE ++G NP A DR+P L +LG+DTGGS+R PAS+CG+ GF+PS+G VS G+ +A SFD +G Sbjct: 38 LEKDEKAKKKPLYGKIIVVKANINVEGYTISCASK--TLENYIAPYDATVIEKIKENGGLIIGIANMDEFACGSSGETSYFGPTKNPRAKDRIPGGSSSGSAAAVSADLCDMALGSDTGGSIRNPASHCGVVGFKPSYGVVSRYGLCDLAMSFDQIG 192
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_HELMI (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=gatA PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.125e-19 Identity = 55/152 (36.18%), Postives = 75/152 (49.34%), Query Frame = 3 Query: 129 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVGWFAWD 584 PL G+ AIKD DG T + + A V + GA +GKT +DE A + EN + NPW +RVP FSLG+DTGGS+R PA++CG+ G +P++G+VS G+I A S D +G F D Sbjct: 70 PLEGIPMAIKDNMCTDGVRTTCSSK--ILNNFVPPYDATVVTKLKEAGAVMMGKTNLDEFAMGSSTENSGFFATCNPWDIERVPGGSSGGSAASVAAGQAVFSLGSDTGGSIRQPAAFCGVVGLKPTYGAVSRFGLIAFASSLDQIGPFTRD 219
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_GEOLS (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=gatA PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.693e-19 Identity = 62/184 (33.70%), Postives = 90/184 (48.91%), Query Frame = 3 Query: 48 KMASRDSDYGAFM----EKLVLQPSSSAHQL------PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569 ++ S D AF+ E+ +L +++ ++ PL+G+ A+KDIF +G T + + A A A + S GA +GK DE A + EN +G NPW D +P + +LGTDTGGS+R PAS+CG G +P++G VS GVI A S D VG Sbjct: 32 RIESTDQSINAFITVTKEQALLDAAAADQRIAAGNCAPLTGIPVALKDIFLTEGVRTTSASK--MLDNFIAPYDATAWTRMKSQGAVLLGKLNQDEFAMGSSCENSAFGPTRNPWNKDHIPGGSSGGSAAAIAAQQAVATLGTDTGGSIRQPASHCGCVGLKPTYGRVSRYGVIAYASSLDQVG 213 The following BLAST results are available for this feature:
BLAST of FC923253 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923253 ID=FC923253; Name=FC923253; organism=Citrus clementina; type=EST; length=719bpback to top |