FC923253
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_BURM1 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=gatA PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.693e-19 Identity = 55/147 (37.41%), Postives = 75/147 (51.02%), Query Frame = 3 Query: 129 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569 PL+GL A KD+F G + G+ A S +T A L + G ++GKT MDE A + EN +G NPW + VP +L + GTDTGGS+R PAS+ G+ G +P++G VS G+I A S D G Sbjct: 66 PLTGLPIAHKDVFVTRGWRSTAGSKMLANYESPFDATVVARLQ--AAGMVTLGKTNMDEFAMGSSNENSAFGAVKNPWDTNAVPGGSSGGSSAAVAARLAPAATGTDTGGSIRQPASFAGVTGIKPTYGRVSRYGMIAFASSLDQGG 210
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_BURTA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=gatA PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.741e-19 Identity = 55/147 (37.41%), Postives = 76/147 (51.70%), Query Frame = 3 Query: 129 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569 PL+GL A KD+F G + G+ A S +T A L+ + G ++GKT MDE A + EN +G NPW + VP +L + GTDTGGS+R PAS+ G+ G +P++G VS G+I A S D G Sbjct: 66 PLAGLPIAHKDVFVTRGWRSTAGSKMLANYASPFDATVVARLS--AAGMVTLGKTNMDEFAMGSSNENSAFGPVKNPWDTNAVPGGSSGGSSAAVAARLAPAATGTDTGGSIRQPASFAGVTGIKPTYGRVSRYGMIAFASSLDQGG 210
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_BDEBA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bdellovibrio bacteriovorus GN=gatA PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.741e-19 Identity = 53/146 (36.30%), Postives = 73/146 (50.00%), Query Frame = 3 Query: 132 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569 L+G+ F IK++F G T G+ + A AV + G +GK DE A + E +G NPW +RVP +LV +LGTDTGGS+R PAS+CGI G +P++G VS G++ A S D G Sbjct: 70 LAGVPFGIKEMFCTKGLTTTAGSK--ILENFVPPYDATAVARLKKSGIVVMGKLNQDEFAMGSSNETSFHGVVKNPWDLERVPGGSSGGSAAAQASRLVAGTLGTDTGGSIRQPASFCGIVGVKPTYGRVSRYGIVAYASSLDQAG 213
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_CUPTR (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=gatA PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.142e-18 Identity = 55/147 (37.41%), Postives = 73/147 (49.66%), Query Frame = 3 Query: 129 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569 PL+G+ A KD+F G G+ S +T +A + G ++GKT MDE A + EN H+G NPW RVP L + GTDTGGS+R PAS+ GI G +P++G VS G+I A S D G Sbjct: 71 PLTGVPVAHKDVFVTRGWRATAGSKMLGNYESPFDATVVERMA--AAGMVTLGKTNMDEFAMGSSNENSHFGPVRNPWDAGRVPGGSSGGSAAAVAAGLAPAATGTDTGGSIRQPASFSGITGIKPTYGRVSRYGMIAFASSLDQGG 215
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_BURXL (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Burkholderia xenovorans (strain LB400) GN=gatA PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.142e-18 Identity = 56/152 (36.84%), Postives = 75/152 (49.34%), Query Frame = 3 Query: 114 SAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569 + H PL GL A KD+F G + G+ + S +T A L + G +GKT MDE A + EN ++G NPW VP +L + GTDTGGS+R PAS+ GI G +P++G VS G+I A S D G Sbjct: 61 TGHAGPLVGLPIAHKDVFVTKGWRSTAGSKMLSNYESPFDATVVARLQ--NAGMVCVGKTNMDEFAMGSSNENSYFGPVQNPWDVKAVPGGSSGGSAAAVAARLAPAATGTDTGGSIRQPASFSGITGIKPTYGRVSRYGMIAFASSLDQGG 210
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_BURPS (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Burkholderia pseudomallei GN=gatA PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.142e-18 Identity = 55/147 (37.41%), Postives = 75/147 (51.02%), Query Frame = 3 Query: 129 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569 PL+GL A KD+F G + G+ A S +T A L+ + G ++GKT MDE A + EN +G NPW VP +L + GTDTGGS+R PAS+ G+ G +P++G VS G+I A S D G Sbjct: 66 PLAGLPIAHKDVFVTRGWRSTAGSKMLANYASPFDATVVARLS--AAGMVTLGKTNMDEFAMGSSNENSAFGPVKNPWDTSAVPGGSSGGSSAAVAARLAPAATGTDTGGSIRQPASFAGVTGIKPTYGRVSRYGMIAFASSLDQGG 210
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_BURPP (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=gatA PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.142e-18 Identity = 56/152 (36.84%), Postives = 75/152 (49.34%), Query Frame = 3 Query: 114 SAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569 + H PL GL A KD+F G + G+ + S +T A L + G +GKT MDE A + EN ++G NPW VP +L + GTDTGGS+R PAS+ GI G +P++G VS G+I A S D G Sbjct: 61 TGHAGPLVGLPIAHKDVFVTKGWRSTAGSKMLSNYESPFDATVVARLQ--NAGMVCVGKTNMDEFAMGSSNENSYFGPVQNPWDVKAVPGGSSGGSAAAVAARLAPAATGTDTGGSIRQPASFSGITGIKPTYGRVSRYGMIAFASSLDQGG 210
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_BURP1 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Burkholderia pseudomallei (strain 1710b) GN=gatA PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.142e-18 Identity = 55/147 (37.41%), Postives = 75/147 (51.02%), Query Frame = 3 Query: 129 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569 PL+GL A KD+F G + G+ A S +T A L+ + G ++GKT MDE A + EN +G NPW VP +L + GTDTGGS+R PAS+ G+ G +P++G VS G+I A S D G Sbjct: 66 PLAGLPIAHKDVFVTRGWRSTAGSKMLANYASPFDATVVARLS--AAGMVTLGKTNMDEFAMGSSNENSAFGPVKNPWDTSAVPGGSSGGSSAAVAARLAPAATGTDTGGSIRQPASFAGVTGIKPTYGRVSRYGMIAFASSLDQGG 210
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_BURP0 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Burkholderia pseudomallei (strain 1106a) GN=gatA PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.142e-18 Identity = 55/147 (37.41%), Postives = 75/147 (51.02%), Query Frame = 3 Query: 129 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569 PL+GL A KD+F G + G+ A S +T A L+ + G ++GKT MDE A + EN +G NPW VP +L + GTDTGGS+R PAS+ G+ G +P++G VS G+I A S D G Sbjct: 66 PLAGLPIAHKDVFVTRGWRSTAGSKMLANYASPFDATVVARLS--AAGMVTLGKTNMDEFAMGSSNENSAFGPVKNPWDTSAVPGGSSGGSSAAVAARLAPAATGTDTGGSIRQPASFAGVTGIKPTYGRVSRYGMIAFASSLDQGG 210
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_BORPA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bordetella parapertussis GN=gatA PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.142e-18 Identity = 57/147 (38.78%), Postives = 71/147 (48.30%), Query Frame = 3 Query: 129 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569 PL+G+ A KD F G T G+ A S +T LA GA S+GK DE A EN YG NPW VP +LV + GTDTGGSVR PA+ CG+ G +P++G+VS G+I S D G Sbjct: 73 PLAGIPIAHKDAFVTRGWRTTAGSKMLAGYASPFDATVVERLA--EAGAVSLGKLNCDEFAMGSGNENSAYGPVRNPWDTRAVPGGSSGGSAAAVAARLVAAATGTDTGGSVRQPAALCGVSGIKPTYGTVSRYGMIAFGSSLDQAG 217 The following BLAST results are available for this feature:
BLAST of FC923253 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923253 ID=FC923253; Name=FC923253; organism=Citrus clementina; type=EST; length=719bpback to top |