FC923253
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_BORBR (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bordetella bronchiseptica GN=gatA PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.142e-18 Identity = 57/147 (38.78%), Postives = 71/147 (48.30%), Query Frame = 3
Query: 129 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569
PL+G+ A KD F G T G+ A S +T LA GA S+GK DE A EN YG NPW VP +LV + GTDTGGSVR PA+ CG+ G +P++G+VS G+I S D G
Sbjct: 73 PLAGIPIAHKDAFVTRGWRTTAGSKMLAGYASPFDATVVERLA--EAGAVSLGKLNCDEFAMGSGNENSAYGPVRNPWDTRAVPGGSSGGSAAAVAARLVAAATGTDTGGSVRQPAALCGVSGIKPTYGTVSRYGMIAFGSSLDQAG 217
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_ACIBL (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Acidobacteria bacterium (strain Ellin345) GN=gatA PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.142e-18 Identity = 59/153 (38.56%), Postives = 74/153 (48.37%), Query Frame = 3
Query: 132 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVGWFAWDPK 590
L+GL AIKD+ G T G+ A A V + + GA +GKT DE A + EN YG NP RVP SLG+DTGGS+R PAS+CG+ G P++G VS G+I A S D +G FA D K
Sbjct: 71 LAGLPVAIKDVISTKGVRTTAGSK--ILEEFIAPYDATVVQKLEAAGAVILGKTNCDEFAMGSSNENSAYGPVRNPRDKSRVPGGSSGGSAAVVAAGTAVTSLGSDTGGSIRQPASFCGVVGLMPTYGRVSRYGLIAFASSLDHIGPFAKDVK 221
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_STRZT (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptococcus pneumoniae (strain Taiwan19F-14) GN=gatA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.491e-18 Identity = 55/149 (36.91%), Postives = 74/149 (49.66%), Query Frame = 3
Query: 132 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVGWFA 578
LSG+ A+KD DG +T + +TA V + G +GKT MDE A +GE HYG N W +VP V SLG+DTGGS+R PA++ GI G +P++G+VS G+I S D +G FA
Sbjct: 69 LSGIPLAVKDNISTDGILTTAASKMLYNYEPIFDATA--VANAKTKGMIVVGKTNMDEFAMGGSGETSHYGATKNAWDHSKVPGGSSSGSAAAVASGQVRLSLGSDTGGSIRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGPFA 215
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_STRZP (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptococcus pneumoniae (strain P1031) GN=gatA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.491e-18 Identity = 55/149 (36.91%), Postives = 74/149 (49.66%), Query Frame = 3
Query: 132 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVGWFA 578
LSG+ A+KD DG +T + +TA V + G +GKT MDE A +GE HYG N W +VP V SLG+DTGGS+R PA++ GI G +P++G+VS G+I S D +G FA
Sbjct: 69 LSGIPLAVKDNISTDGILTTAASKMLYNYEPIFDATA--VANAKTKGMIVVGKTNMDEFAMGGSGETSHYGATKNAWDHSKVPGGSSSGSAAAVASGQVRLSLGSDTGGSIRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGPFA 215
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_STRZJ (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptococcus pneumoniae (strain JJA) GN=gatA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.491e-18 Identity = 55/149 (36.91%), Postives = 74/149 (49.66%), Query Frame = 3
Query: 132 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVGWFA 578
LSG+ A+KD DG +T + +TA V + G +GKT MDE A +GE HYG N W +VP V SLG+DTGGS+R PA++ GI G +P++G+VS G+I S D +G FA
Sbjct: 69 LSGIPLAVKDNISTDGILTTAASKMLYNYEPIFDATA--VANAKTKGMIVVGKTNMDEFAMGGSGETSHYGATKNAWNHSKVPGGSSSGSAAAVASGQVRLSLGSDTGGSIRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGPFA 215
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_STRR6 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=gatA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.491e-18 Identity = 55/149 (36.91%), Postives = 74/149 (49.66%), Query Frame = 3
Query: 132 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVGWFA 578
LSG+ A+KD DG +T + +TA V + G +GKT MDE A +GE HYG N W +VP V SLG+DTGGS+R PA++ GI G +P++G+VS G+I S D +G FA
Sbjct: 69 LSGIPLAVKDNISTDGILTTAASKMLYNYEPIFDATA--VANAKTKGMIVVGKTNMDEFAMGGSGETSHYGATKNAWDHSKVPGGSSSGSAAAVASGQVRLSLGSDTGGSIRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGPFA 215
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_STRPS (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptococcus pneumoniae (strain CGSP14) GN=gatA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.491e-18 Identity = 55/149 (36.91%), Postives = 74/149 (49.66%), Query Frame = 3
Query: 132 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVGWFA 578
LSG+ A+KD DG +T + +TA V + G +GKT MDE A +GE HYG N W +VP V SLG+DTGGS+R PA++ GI G +P++G+VS G+I S D +G FA
Sbjct: 69 LSGIPLAVKDNISTDGILTTAASKMLYNYEPIFDATA--VANAKTKGMIVVGKTNMDEFAMGGSGETSHYGATKNAWDHSKVPGGSSSGSAAAVASGQVRLSLGSDTGGSIRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGPFA 215
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_STRPN (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptococcus pneumoniae GN=gatA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.491e-18 Identity = 55/149 (36.91%), Postives = 74/149 (49.66%), Query Frame = 3
Query: 132 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVGWFA 578
LSG+ A+KD DG +T + +TA V + G +GKT MDE A +GE HYG N W +VP V SLG+DTGGS+R PA++ GI G +P++G+VS G+I S D +G FA
Sbjct: 69 LSGIPLAVKDNISTDGILTTAASKMLYNYEPIFDATA--VANAKTKGMIVVGKTNMDEFAMGGSGETSHYGATKNAWNHSKVPGGSSSGSAAAVASGQVRLSLGSDTGGSIRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGPFA 215
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_STRPJ (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=gatA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.491e-18 Identity = 55/149 (36.91%), Postives = 74/149 (49.66%), Query Frame = 3
Query: 132 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVGWFA 578
LSG+ A+KD DG +T + +TA V + G +GKT MDE A +GE HYG N W +VP V SLG+DTGGS+R PA++ GI G +P++G+VS G+I S D +G FA
Sbjct: 69 LSGIPLAVKDNISTDGILTTAASKMLYNYEPIFDATA--VANAKTKGMIVVGKTNMDEFAMGGSGETSHYGATKNAWDHSKVPGGSSSGSAAAVASGQVRLSLGSDTGGSIRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGPFA 215
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_STRPI (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=gatA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.491e-18 Identity = 55/149 (36.91%), Postives = 74/149 (49.66%), Query Frame = 3
Query: 132 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVGWFA 578
LSG+ A+KD DG +T + +TA V + G +GKT MDE A +GE HYG N W +VP V SLG+DTGGS+R PA++ GI G +P++G+VS G+I S D +G FA
Sbjct: 69 LSGIPLAVKDNISTDGILTTAASKMLYNYEPIFDATA--VANAKTKGMIVVGKTNMDEFAMGGSGETSHYGATKNAWDHSKVPGGSSSGSAAAVASGQVRLSLGSDTGGSIRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGPFA 215 The following BLAST results are available for this feature:
BLAST of FC923253 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923253 ID=FC923253; Name=FC923253; organism=Citrus clementina; type=EST; length=719bpback to top |