FC923253
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_STRP7 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptococcus pneumoniae (strain 70585) GN=gatA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.491e-18 Identity = 55/149 (36.91%), Postives = 74/149 (49.66%), Query Frame = 3 Query: 132 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVGWFA 578 LSG+ A+KD DG +T + +TA V + G +GKT MDE A +GE HYG N W +VP V SLG+DTGGS+R PA++ GI G +P++G+VS G+I S D +G FA Sbjct: 69 LSGIPLAVKDNISTDGILTTAASKMLYNYEPIFDATA--VANAKTKGMIVVGKTNMDEFAMGGSGETSHYGATKNAWDHSKVPGGSSSGSAAAVASGQVRLSLGSDTGGSIRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGPFA 215
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_STRP4 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptococcus pneumoniae serotype 19F (strain G54) GN=gatA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.491e-18 Identity = 55/149 (36.91%), Postives = 74/149 (49.66%), Query Frame = 3 Query: 132 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVGWFA 578 LSG+ A+KD DG +T + +TA V + G +GKT MDE A +GE HYG N W +VP V SLG+DTGGS+R PA++ GI G +P++G+VS G+I S D +G FA Sbjct: 69 LSGIPLAVKDNISTDGILTTAASKMLYNYEPIFDATA--VANAKTKGMIVVGKTNMDEFAMGGSGETSHYGATKNAWDHSKVPGGSSSGSAAAVASGQVRLSLGSDTGGSIRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGPFA 215
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_STRP2 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) GN=gatA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.491e-18 Identity = 55/149 (36.91%), Postives = 74/149 (49.66%), Query Frame = 3 Query: 132 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVGWFA 578 LSG+ A+KD DG +T + +TA V + G +GKT MDE A +GE HYG N W +VP V SLG+DTGGS+R PA++ GI G +P++G+VS G+I S D +G FA Sbjct: 69 LSGIPLAVKDNISTDGILTTAASKMLYNYEPIFDATA--VANAKTKGMIVVGKTNMDEFAMGGSGETSHYGATKNAWDHSKVPGGSSSGSAAAVASGQVRLSLGSDTGGSIRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGPFA 215
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_METFK (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=gatA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.491e-18 Identity = 54/147 (36.73%), Postives = 73/147 (49.66%), Query Frame = 3 Query: 129 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569 PL+G+ A KDIF G T G+ + A A + + GA ++GKT MDE A + E ++G NPW RVP +L + GTDTGGS+R PAS CG+ G +P++G S G+I A S D G Sbjct: 67 PLTGIPIAQKDIFCAKGWRTTCGSR--MLENFIAPYDAGIIERFNAAGAVNLGKTNMDEFAMGSSNETSYFGKVQNPWDRSRVPGGSSGGSAAAVAARLCAAATGTDTGGSIRQPASLCGLSGLKPTYGLASRYGMIAFASSLDQAG 211
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_NATPD (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=gatA PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.947e-18 Identity = 56/166 (33.73%), Postives = 80/166 (48.19%), Query Frame = 3 Query: 72 YGAFMEKLVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569 + AF+ + ++P+ PL G+T A+KD DG T G+ A A V + GAT +GKT MDE E +G NP A RVP +LG+DTGGSVR PA++CG+ G +P++G VS G++ A S + +G Sbjct: 3 HNAFITEETIEPTDDG---PLDGVTVAVKDNISTDGVRTTCGSEMLA--DYVPPYDATVVERLRDAGATIVGKTNMDEFGMGTTTETSAFGPTENPAAEGRVPGGSSGGSAAAVAAGDADLALGSDTGGSVRCPAAFCGVVGIKPTYGLVSRYGLVAYANSLEQIG 163
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_MORCA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Moraxella catarrhalis GN=gatA PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.947e-18 Identity = 58/173 (33.53%), Postives = 82/173 (47.40%), Query Frame = 3 Query: 57 SRDSDYGAFMEKLVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVGWF 575 ++D D KL + + PL G+ A KD G +T G+ S +T V ++ + G S+GK MDE A + E+ ++G NPW RVP V + G+DTGGS+R PAS+CGI G +P++G VS G+I A S D G F Sbjct: 46 TKDFDNALAQAKLADKLRAKGDNRPLLGVPMAHKDNLCTKGVLTTAGSKMLYNFVSPYDATV--VDSIANSGFVSLGKLNMDEFAMGSDNESSYFGAVHNPWDVQRVPGGSSGGSAAAVAAGFVPVATGSDTGGSIRQPASFCGITGIKPTYGRVSRYGMIAYASSLDQAGTF 216
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_LYSSC (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Lysinibacillus sphaericus (strain C3-41) GN=gatA PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.947e-18 Identity = 58/183 (31.69%), Postives = 86/183 (46.99%), Query Frame = 3 Query: 48 KMASRDSDYGAFMEKLVLQPSSSAHQL---------PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569 ++A D D AF+ + ++ A ++ PL GL +KD +G T + +T V + G ++GK MDE A + EN +Y T NPW + VP V FSLG+DTGGS+R PA+YCG+ G +P++G VS G++ A S D +G Sbjct: 32 RIAKLDGDVQAFLASNEEKATAQAAEMDKVPFEERGPLFGLPIGVKDNIVTEGLETTCASKILEGFMPIYDATV--VNKLREAGMITVGKLNMDEFAMGSSNENSYYKTTKNPWNLNHVPGGSSGASAASVAAGEVPFSLGSDTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIG 212
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_GEOMG (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=gatA PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.947e-18 Identity = 56/147 (38.10%), Postives = 72/147 (48.98%), Query Frame = 3 Query: 129 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569 PL+G+ A+KDIF G T + TA A L GA +GK DE A +GE+ +G NPW + +P + +LGTDTGGS+R PAS+CG G RP++G VS GVI A S D VG Sbjct: 69 PLTGIPVALKDIFVTKGIRTTCASKILDNFVPPYDGTAVAKLK--EAGAVIVGKLNQDEFAMGSSGESSAFGPTRNPWNLECIPGGSSSGSAAAIAARTATATLGTDTGGSIRQPASHCGCVGLRPTYGRVSRYGVIAYASSLDQVG 213
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_ALCBS (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=gatA PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.947e-18 Identity = 60/154 (38.96%), Postives = 78/154 (50.65%), Query Frame = 3 Query: 108 SSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVG 569 SSS L L+GL A KDIF +G T G+ + A TA V + + GA +GKT MDE A + E +YG NPW +RVP +L + GTDTGGS+R PA+ I G +P++G VS G+I A S D G Sbjct: 66 SSSVSGL-LTGLPIAHKDIFCTEGVRTSCGSK--MLDNFIAPYTATVVEKMAAEGAVMLGKTNMDEFAMGSSNETSYYGPVKNPWDLERVPGGSSGGAAACLGARLAPAATGTDTGGSIRQPAALNNITGLKPTYGRVSRWGMIAFASSLDQAG 216
BLAST of FC923253 vs. ExPASy Swiss-Prot
Match: GATA_THISH (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=gatA PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.543e-18 Identity = 67/194 (34.54%), Postives = 89/194 (45.88%), Query Frame = 3 Query: 129 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAPDRVPXXXXXXXXXXXXXKLVGFSLGTDTGGSVRAPASYCGIFGFRPSHGSVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVL--LQLPDDASLVRPSRVIFAEDLLALSSIPV 704 PL+G+ A KDIF DG T G+ + A A V + G +GKT MDE A + E +G NPW RVP +L + GTDTGGS+R PA+ CGI G +P++G VS G+I A S D G A + + V+ D S+ RP AED A + P+ Sbjct: 67 PLTGVPMAQKDIFCTDGVRTTCGSK--MLDNFIAPYDATVVERFKAEGCPMLGKTNMDEFAMGSSNETSFHGPVKNPWDTARVPGGSSGGSAAAVAARLTPSATGTDTGGSIRQPAALCGITGLKPTYGRVSRWGMIAFASSLDQGGPMAATAEDCALLANVMSGFDPRDSTSIERP-----AEDFTARLNEPL 253 The following BLAST results are available for this feature:
BLAST of FC923253 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923253 ID=FC923253; Name=FC923253; organism=Citrus clementina; type=EST; length=719bpback to top |