FC923255

Overview
NameFC923255
Unique NameFC923255
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length745
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923255 vs. ExPASy Swiss-Prot
Match: CYSC_THEEB (Adenylyl-sulfate kinase OS=Thermosynechococcus elongatus (strain BP-1) GN=cysC PE=3 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 6.463e-12
Identity = 24/43 (55.81%), Postives = 33/43 (76.74%), Query Frame = 3
Query:   81 DRDACRSMLPEGDFIEVFMDVPLQVCEARDPKGLYKLAREGKV 209
            DR+A R+ +P GDF+E++  V L+ CEARD KGLYK AR G++
Sbjct:  123 DREAVRNRMPYGDFLEIYCQVSLEACEARDVKGLYKKARAGQI 165          

HSP 2 Score: 33.8834 bits (76), Expect = 6.463e-12
Identity = 16/28 (57.14%), Postives = 18/28 (64.29%), Query Frame = 1
Query:    1 DNCRHGLNRDLSFKAEDRVENIRRIEKI 84
            DN RHGL  DL F    R ENIRRI ++
Sbjct:   74 DNVRHGLCSDLDFSEVGRKENIRRIGEV 101          
BLAST of FC923255 vs. ExPASy Swiss-Prot
Match: CYSC_PROMA (Adenylyl-sulfate kinase OS=Prochlorococcus marinus GN=cysC PE=3 SV=1)

HSP 1 Score: 47.7506 bits (112), Expect = 9.397e-12
Identity = 19/43 (44.19%), Postives = 28/43 (65.12%), Query Frame = 3
Query:   81 DRDACRSMLPEGDFIEVFMDVPLQVCEARDPKGLYKLAREGKV 209
            DR+  R ++ E DF+E++    L +CE RD KGLY  AR G++
Sbjct:  114 DREKARKLVKENDFLEIYCAANLDICETRDTKGLYAKARAGEI 156          

HSP 2 Score: 37.3502 bits (85), Expect = 9.397e-12
Identity = 17/28 (60.71%), Postives = 19/28 (67.86%), Query Frame = 1
Query:    1 DNCRHGLNRDLSFKAEDRVENIRRIEKI 84
            DN RHGL  DL F   DR ENIRRI ++
Sbjct:   65 DNIRHGLCNDLGFSDSDREENIRRIGEV 92          

HSP 3 Score: 25.0238 bits (53), Expect = 9.397e-12
Identity = 18/43 (41.86%), Postives = 22/43 (51.16%), Query Frame = 2
Query:  209 FTGIDDPYEPPLNCEIVLKQTG----DDCPSPADMVETVVSYL 325
            FTGI  PYE P N ++ +  TG    D C      VE V+S L
Sbjct:  159 FTGISSPYEEPENPDLKI-DTGLKDIDQC------VEEVISKL 194          
BLAST of FC923255 vs. ExPASy Swiss-Prot
Match: CYSC_ENT38 (Adenylyl-sulfate kinase OS=Enterobacter sp. (strain 638) GN=cysC PE=3 SV=1)

HSP 1 Score: 51.9878 bits (123), Expect = 2.391e-11
Identity = 23/43 (53.49%), Postives = 29/43 (67.44%), Query Frame = 3
Query:   81 DRDACRSMLPEGDFIEVFMDVPLQVCEARDPKGLYKLAREGKV 209
            +R   R  +    FIEVF+D PL +CE RDPKGLYK AR G++
Sbjct:  114 ERQMVRERVGHDRFIEVFVDTPLAICETRDPKGLYKKARAGEL 156          

HSP 2 Score: 37.3502 bits (85), Expect = 2.391e-11
Identity = 16/28 (57.14%), Postives = 20/28 (71.43%), Query Frame = 1
Query:    1 DNCRHGLNRDLSFKAEDRVENIRRIEKI 84
            DN RHGL  DL F  +DR ENIRR+ ++
Sbjct:   65 DNVRHGLCSDLGFSDDDRKENIRRVGEV 92          
BLAST of FC923255 vs. ExPASy Swiss-Prot
Match: CYSC_AERS4 (Adenylyl-sulfate kinase OS=Aeromonas salmonicida (strain A449) GN=cysC PE=3 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 2.394e-11
Identity = 24/43 (55.81%), Postives = 33/43 (76.74%), Query Frame = 3
Query:   81 DRDACRSMLPEGDFIEVFMDVPLQVCEARDPKGLYKLAREGKV 209
            +R+  R++L   +F+EVF+D PL VCE RDPKGLYK AR G++
Sbjct:  110 ERELVRNLLGADEFVEVFVDAPLAVCEERDPKGLYKKARAGEI 152          

HSP 2 Score: 32.3426 bits (72), Expect = 2.394e-11
Identity = 15/28 (53.57%), Postives = 18/28 (64.29%), Query Frame = 1
Query:    1 DNCRHGLNRDLSFKAEDRVENIRRIEKI 84
            DN RHGL  DL F    R ENIRR+ ++
Sbjct:   61 DNVRHGLCGDLGFDDAARQENIRRVGEV 88          
BLAST of FC923255 vs. ExPASy Swiss-Prot
Match: CYSC_SYNY3 (Probable adenylyl-sulfate kinase OS=Synechocystis sp. (strain PCC 6803) GN=cysC PE=3 SV=1)

HSP 1 Score: 47.3654 bits (111), Expect = 2.654e-11
Identity = 20/32 (62.50%), Postives = 25/32 (78.12%), Query Frame = 3
Query:  114 GDFIEVFMDVPLQVCEARDPKGLYKLAREGKV 209
            GDF+EVF++ PL VCE RD KGLY  AR G++
Sbjct:  100 GDFLEVFVNAPLAVCEERDVKGLYAKARSGEI 131          

HSP 2 Score: 35.4242 bits (80), Expect = 2.654e-11
Identity = 13/18 (72.22%), Postives = 16/18 (88.89%), Query Frame = 2
Query:  203 EGFTGIDDPYEPPLNCEI 256
            +GFTGIDDPYEPP N ++
Sbjct:  132 KGFTGIDDPYEPPTNPDV 149          

HSP 3 Score: 25.7942 bits (55), Expect = 2.654e-11
Identity = 13/25 (52.00%), Postives = 14/25 (56.00%), Query Frame = 1
Query:    1 DNCRHGLNRDLSFKAEDRVENIRRI 75
            D  R  L + L F  EDR  NIRRI
Sbjct:   42 DVVRTNLTKGLGFSKEDRDTNIRRI 66          
BLAST of FC923255 vs. ExPASy Swiss-Prot
Match: CYSNC_MYCTU (Bifunctional enzyme cysN/cysC OS=Mycobacterium tuberculosis GN=cysNC PE=3 SV=1)

HSP 1 Score: 48.1358 bits (113), Expect = 2.983e-11
Identity = 21/31 (67.74%), Postives = 23/31 (74.19%), Query Frame = 3
Query:  117 DFIEVFMDVPLQVCEARDPKGLYKLAREGKV 209
            DF EVF D PLQ CE RDPKGLY  AR G++
Sbjct:  543 DFFEVFCDTPLQDCERRDPKGLYAKARAGEI 573          

HSP 2 Score: 40.817 bits (94), Expect = 2.983e-11
Identity = 17/35 (48.57%), Postives = 20/35 (57.14%), Query Frame = 1
Query:    1 DNCRHGLNRDLSFKAEDRVENIRRIEKIEMPAVQC 105
            DN RHGLN DL F   DR EN+RR+  +      C
Sbjct:  480 DNLRHGLNADLGFSMADRAENLRRLSHVATLLADC 514          
BLAST of FC923255 vs. ExPASy Swiss-Prot
Match: CYSC_BUCAI (Adenylyl-sulfate kinase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=cysC PE=3 SV=1)

HSP 1 Score: 54.299 bits (129), Expect = 3.099e-11
Identity = 22/42 (52.38%), Postives = 33/42 (78.57%), Query Frame = 3
Query:   84 RDACRSMLPEGDFIEVFMDVPLQVCEARDPKGLYKLAREGKV 209
            R+  R ML + +F+EVF+D P+++CE+RDPK LYK AR G++
Sbjct:  116 REMVRQMLGKKNFLEVFIDTPIEICESRDPKKLYKQARTGQI 157          

HSP 2 Score: 34.6538 bits (78), Expect = 3.099e-11
Identity = 17/28 (60.71%), Postives = 19/28 (67.86%), Query Frame = 1
Query:    1 DNCRHGLNRDLSFKAEDRVENIRRIEKI 84
            DN R GL  DLSF   DR ENIRRI ++
Sbjct:   66 DNIRSGLCSDLSFSLADRNENIRRIGEV 93          
BLAST of FC923255 vs. ExPASy Swiss-Prot
Match: KAPS_PENCH (Adenylyl-sulfate kinase OS=Penicillium chrysogenum PE=1 SV=1)

HSP 1 Score: 50.0618 bits (118), Expect = 5.220e-11
Identity = 27/55 (49.09%), Postives = 34/55 (61.82%), Query Frame = 3
Query:   78 KDRDACRSM-----------LPEGDFIEVFMDVPLQVCEARDPKGLYKLAREGKV 209
            KDRD  R +           LP   F+EV++DVP++V E RDPKGLYK AREG +
Sbjct:  111 KDRDTARQLHEVATPGEETGLP---FVEVYVDVPVEVAEQRDPKGLYKKAREGVI 162          

HSP 2 Score: 38.1206 bits (87), Expect = 5.220e-11
Identity = 17/28 (60.71%), Postives = 20/28 (71.43%), Query Frame = 1
Query:    1 DNCRHGLNRDLSFKAEDRVENIRRIEKI 84
            DN R GLN+DL F   DR ENIRRI ++
Sbjct:   63 DNIRFGLNKDLGFSEADRNENIRRIAEV 90          
BLAST of FC923255 vs. ExPASy Swiss-Prot
Match: CYSC_BURXL (Adenylyl-sulfate kinase OS=Burkholderia xenovorans (strain LB400) GN=cysC PE=3 SV=1)

HSP 1 Score: 52.373 bits (124), Expect = 8.872e-11
Identity = 25/44 (56.82%), Postives = 33/44 (75.00%), Query Frame = 3
Query:   78 KDRDACRSMLPEGDFIEVFMDVPLQVCEARDPKGLYKLAREGKV 209
            + R A R ++ EG F+EVF++ PLQVCEARD KGLY  AR G++
Sbjct:   91 RHRRAAREIVGEG-FVEVFVNAPLQVCEARDAKGLYARARRGEI 133          

HSP 2 Score: 35.039 bits (79), Expect = 8.872e-11
Identity = 15/28 (53.57%), Postives = 18/28 (64.29%), Query Frame = 1
Query:    1 DNCRHGLNRDLSFKAEDRVENIRRIEKI 84
            D  R GLN DL F  EDR EN+RR+  +
Sbjct:   43 DVLRRGLNADLGFTPEDRTENLRRVAHV 70          
The following BLAST results are available for this feature:
BLAST of FC923255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 99
Match NameE-valueIdentityDescription
CYSC_THEEB6.463e-1255.81Adenylyl-sulfate kinase OS=Thermosynechococcus elo... [more]
CYSC_PROMA9.397e-1244.19Adenylyl-sulfate kinase OS=Prochlorococcus marinus... [more]
CYSC_ENT382.391e-1153.49Adenylyl-sulfate kinase OS=Enterobacter sp. (strai... [more]
CYSC_AERS42.394e-1155.81Adenylyl-sulfate kinase OS=Aeromonas salmonicida (... [more]
CYSC_SYNY32.654e-1162.50Probable adenylyl-sulfate kinase OS=Synechocystis ... [more]
CYSNC_MYCTU2.983e-1167.74Bifunctional enzyme cysN/cysC OS=Mycobacterium tub... [more]
CYSC_BUCAI3.099e-1152.38Adenylyl-sulfate kinase OS=Buchnera aphidicola sub... [more]
KAPS_PENCH5.220e-1149.09Adenylyl-sulfate kinase OS=Penicillium chrysogenum... [more]
CYSC_BURXL8.872e-1156.82Adenylyl-sulfate kinase OS=Burkholderia xenovorans... [more]

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Properties
Property NameValue
Genbank descriptionC31702G02EF StrClemenN Citrus clementina cDNA clone C31702G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923255 ID=FC923255; Name=FC923255; organism=Citrus clementina; type=EST; length=745bp
GACAACTGCCGGCATGGACTGAACCGTGATCTAAGTTTTAAGGCAGAAGA
TCGTGTGGAAAACATACGCAGGATTGAAAAGATCGAGATGCCTGCCGTTC
AATGTTGCCAGAAGGAGATTTCATTGAGGTGTTCATGGATGTGCCACTTC
AAGTGTGTGAGGCAAGGGACCCAAAGGGCCTTTACAAGCTTGCACGAGAA
GGGAAGGTTTTACTGGGATTGATGATCCATATGAACCACCATTAAACTGT
GAGATAGTACTAAAACAGACGGGAGATGACTGTCCTTCACCGGCTGATAT
GGTTGAAACTGTGGTATCTTACCTGGATGATAATGGCTTCCTGCGGGCCT
AATTTGAAGAGAAAGGTCTCAGCTCTTGGTTTCCATTGCCTTTGGTCACC
TGCAATACTTTGAGGTATCGACAAAAATCATGGTACGATCCAGTAAGGAA
ACTGATTGTTTCCTGCATCTGTAGCGACAATAAATGTCTGGCACTTTAAT
TACTCGATCGAGTAGTTGACGTCAGTGCCAAGCAAGTTGCATAGCGTTTC
GCGTCTTTAATTCAGGTTTGTTTTGGAATAAGTTATATGTTCATAGGGTT
GGGGATCGATGTAAATCAGTGTCATGCAGCATTAGAATAAAAGTTGTCTC
AGGTTTGCAAATTTCGATTGTACACGTACCCAACCCCGGCATCTTTGTAT
TACCATATTTGTGATAAGGAGCCAAGCTCTTACAGGCGTCTCATT
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