FC923257
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923257 vs. ExPASy Swiss-Prot
Match: RK2_BARVE (50S ribosomal protein L2, chloroplastic OS=Barbarea verna GN=rpl2-A PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 6.536e-31 Identity = 63/65 (96.92%), Postives = 64/65 (98.46%), Query Frame = 3 Query: 3 RNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLS 197 RN KDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPL+ Sbjct: 67 RNAKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLT 131
BLAST of FC923257 vs. ExPASy Swiss-Prot
Match: RK2_ARATH (50S ribosomal protein L2, chloroplastic OS=Arabidopsis thaliana GN=rpl2-A PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 6.536e-31 Identity = 63/65 (96.92%), Postives = 64/65 (98.46%), Query Frame = 3 Query: 3 RNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLS 197 RN KDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPL+ Sbjct: 67 RNAKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLT 131
BLAST of FC923257 vs. ExPASy Swiss-Prot
Match: RK2_ARAHI (50S ribosomal protein L2, chloroplastic OS=Arabis hirsuta GN=rpl2-A PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 6.536e-31 Identity = 63/65 (96.92%), Postives = 64/65 (98.46%), Query Frame = 3 Query: 3 RNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLS 197 RN KDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPL+ Sbjct: 67 RNAKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLT 131
BLAST of FC923257 vs. ExPASy Swiss-Prot
Match: RK2_AETGR (50S ribosomal protein L2, chloroplastic OS=Aethionema grandiflora GN=rpl2-A PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 6.536e-31 Identity = 63/65 (96.92%), Postives = 64/65 (98.46%), Query Frame = 3 Query: 3 RNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLS 197 RN KDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPL+ Sbjct: 67 RNAKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLT 131
BLAST of FC923257 vs. ExPASy Swiss-Prot
Match: RK2_AETCO (50S ribosomal protein L2, chloroplastic OS=Aethionema cordifolium GN=rpl2-A PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 6.536e-31 Identity = 63/65 (96.92%), Postives = 64/65 (98.46%), Query Frame = 3 Query: 3 RNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLS 197 RN KDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPL+ Sbjct: 67 RNAKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLT 131
BLAST of FC923257 vs. ExPASy Swiss-Prot
Match: RK2A_POPAL (50S ribosomal protein L2-A, chloroplastic OS=Populus alba GN=rpl2-A PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 8.537e-31 Identity = 63/65 (96.92%), Postives = 64/65 (98.46%), Query Frame = 3 Query: 3 RNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLS 197 RNEK IYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTI+SGTEVPIKMGNALPLS Sbjct: 67 RNEKYIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIISGTEVPIKMGNALPLS 131
BLAST of FC923257 vs. ExPASy Swiss-Prot
Match: RK2A_CHLSC (50S ribosomal protein L2-A, chloroplastic OS=Chloranthus spicatus GN=rpl2-A PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 8.537e-31 Identity = 64/66 (96.97%), Postives = 64/66 (96.97%), Query Frame = 3 Query: 3 RNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSA 200 RNEKDI GRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPI MGNALPLSA Sbjct: 67 RNEKDISGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPISMGNALPLSA 132
BLAST of FC923257 vs. ExPASy Swiss-Prot
Match: RK2_LOTJA (50S ribosomal protein L2, chloroplastic OS=Lotus japonicus GN=rpl2-A PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.115e-30 Identity = 62/65 (95.38%), Postives = 65/65 (100.00%), Query Frame = 3 Query: 3 RNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLS 197 RNEK+IYG+IVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPL+ Sbjct: 67 RNEKNIYGKIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLT 131
BLAST of FC923257 vs. ExPASy Swiss-Prot
Match: RK2_LACSA (50S ribosomal protein L2, chloroplastic OS=Lactuca sativa GN=rpl2-A PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.115e-30 Identity = 63/65 (96.92%), Postives = 64/65 (98.46%), Query Frame = 3 Query: 3 RNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLS 197 RNEKDIYGRIVTIEYDPNRNAYICLIHY DGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPL+ Sbjct: 67 RNEKDIYGRIVTIEYDPNRNAYICLIHYRDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLT 131
BLAST of FC923257 vs. ExPASy Swiss-Prot
Match: RK2_HELAN (50S ribosomal protein L2, chloroplastic OS=Helianthus annuus GN=rpl2-A PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.115e-30 Identity = 63/65 (96.92%), Postives = 64/65 (98.46%), Query Frame = 3 Query: 3 RNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLS 197 RNEKDIYGRIVTIEYDPNRNAYICLIHY DGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPL+ Sbjct: 67 RNEKDIYGRIVTIEYDPNRNAYICLIHYRDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLT 131 The following BLAST results are available for this feature:
BLAST of FC923257 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923257 ID=FC923257; Name=FC923257; organism=Citrus clementina; type=EST; length=764bpback to top |