FC923257
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923257 vs. ExPASy Swiss-Prot
Match: RK2A_SOYBN (50S ribosomal protein L2-A, chloroplastic OS=Glycine max GN=rpl2-A PE=3 SV=2) HSP 1 Score: 133.65 bits (335), Expect = 1.115e-30 Identity = 62/65 (95.38%), Postives = 65/65 (100.00%), Query Frame = 3 Query: 3 RNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLS 197 RNEK+IYGRIVTIEYDPNRNAYICLIHYGDGEK+YILHPRGAIIGDTIVSGTEVPIKMGNALPL+ Sbjct: 67 RNEKNIYGRIVTIEYDPNRNAYICLIHYGDGEKKYILHPRGAIIGDTIVSGTEVPIKMGNALPLT 131
BLAST of FC923257 vs. ExPASy Swiss-Prot
Match: RK2A_COFAR (50S ribosomal protein L2-A, chloroplastic OS=Coffea arabica GN=rpl2-A PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.115e-30 Identity = 62/65 (95.38%), Postives = 64/65 (98.46%), Query Frame = 3 Query: 3 RNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLS 197 R EKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGA+IGDTIVSGTEVPIKMGNALPL+ Sbjct: 67 RTEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGALIGDTIVSGTEVPIKMGNALPLT 131
BLAST of FC923257 vs. ExPASy Swiss-Prot
Match: RK2_POPTR (50S ribosomal protein L2, chloroplastic OS=Populus trichocarpa GN=rpl2-A PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.902e-30 Identity = 62/65 (95.38%), Postives = 64/65 (98.46%), Query Frame = 3 Query: 3 RNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLS 197 RNEK IYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTI+SGTEVPIKMGNALPL+ Sbjct: 67 RNEKYIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIISGTEVPIKMGNALPLT 131
BLAST of FC923257 vs. ExPASy Swiss-Prot
Match: RK2_JASNU (50S ribosomal protein L2, chloroplastic OS=Jasminum nudiflorum GN=rpl2-A PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.902e-30 Identity = 61/65 (93.85%), Postives = 65/65 (100.00%), Query Frame = 3 Query: 3 RNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLS 197 RN+KDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGA+IGDTIVSGT+VPIKMGNALPL+ Sbjct: 67 RNKKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGALIGDTIVSGTKVPIKMGNALPLT 131
BLAST of FC923257 vs. ExPASy Swiss-Prot
Match: RK2_GOSBA (50S ribosomal protein L2, chloroplastic OS=Gossypium barbadense GN=rpl2-A PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.902e-30 Identity = 62/65 (95.38%), Postives = 63/65 (96.92%), Query Frame = 3 Query: 3 RNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLS 197 RNEKDIYGRIVTIEYDPNRNAYIC IHYGDGEKRYILHPRGAIIGD IVSGTEVPIKMGNALPL+ Sbjct: 67 RNEKDIYGRIVTIEYDPNRNAYICFIHYGDGEKRYILHPRGAIIGDIIVSGTEVPIKMGNALPLT 131
BLAST of FC923257 vs. ExPASy Swiss-Prot
Match: RK2B_POPAL (50S ribosomal protein L2-B, chloroplastic OS=Populus alba GN=rpl2-B PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.902e-30 Identity = 62/65 (95.38%), Postives = 64/65 (98.46%), Query Frame = 3 Query: 3 RNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLS 197 RNEK IYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTI+SGTEVPIKMGNALPL+ Sbjct: 67 RNEKYIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIISGTEVPIKMGNALPLT 131
BLAST of FC923257 vs. ExPASy Swiss-Prot
Match: RK2_DIOEL (50S ribosomal protein L2, chloroplastic OS=Dioscorea elephantipes GN=rpl2-A PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.484e-30 Identity = 63/65 (96.92%), Postives = 63/65 (96.92%), Query Frame = 3 Query: 3 RNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLS 197 RNEKDI GRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPI MGNALPLS Sbjct: 67 RNEKDISGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPISMGNALPLS 131
BLAST of FC923257 vs. ExPASy Swiss-Prot
Match: RK2_CAPBU (50S ribosomal protein L2, chloroplastic OS=Capsella bursa-pastoris GN=rpl2-A PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.484e-30 Identity = 62/65 (95.38%), Postives = 63/65 (96.92%), Query Frame = 3 Query: 3 RNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLS 197 RN DIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPL+ Sbjct: 67 RNANDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLT 131
BLAST of FC923257 vs. ExPASy Swiss-Prot
Match: RK2_MORIN (50S ribosomal protein L2, chloroplastic OS=Morus indica GN=rpl2-A PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 3.244e-30 Identity = 61/65 (93.85%), Postives = 64/65 (98.46%), Query Frame = 3 Query: 3 RNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLS 197 RNEKDIYG+IVTIEYDPNRNAYICLIHYG GEKRYILHPRGA+IGDTIVSGTEVPIKMGNALPL+ Sbjct: 67 RNEKDIYGKIVTIEYDPNRNAYICLIHYGGGEKRYILHPRGALIGDTIVSGTEVPIKMGNALPLT 131
BLAST of FC923257 vs. ExPASy Swiss-Prot
Match: RK2_EUCGG (50S ribosomal protein L2, chloroplastic OS=Eucalyptus globulus subsp. globulus GN=rpl2-A PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 4.237e-30 Identity = 62/65 (95.38%), Postives = 64/65 (98.46%), Query Frame = 3 Query: 3 RNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLS 197 RNEKDIYGRIV+IEYDPNRNA ICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPL+ Sbjct: 67 RNEKDIYGRIVSIEYDPNRNASICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLT 131 The following BLAST results are available for this feature:
BLAST of FC923257 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923257 ID=FC923257; Name=FC923257; organism=Citrus clementina; type=EST; length=764bpback to top |