FC923257
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923257 vs. ExPASy Swiss-Prot
Match: RL2_BORDL (50S ribosomal protein L2 OS=Borrelia duttonii (strain Ly) GN=rplB PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 8.027e-13 Identity = 34/67 (50.75%), Postives = 46/67 (68.66%), Query Frame = 3 Query: 3 RNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAV 203 R++ I R+ IEYDPNR+ I L+ Y DG+KRYI+ P+G +GD + SG PIK+GNALPL + Sbjct: 71 RDKFGIPARVAAIEYDPNRSPNIALLVYRDGDKRYIIAPKGVKVGDILESGPNAPIKIGNALPLENI 137
BLAST of FC923257 vs. ExPASy Swiss-Prot
Match: RL2_BLOPB (50S ribosomal protein L2 OS=Blochmannia pennsylvanicus (strain BPEN) GN=rplB PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 8.027e-13 Identity = 38/67 (56.72%), Postives = 45/67 (67.16%), Query Frame = 3 Query: 3 RNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAV 203 RN+ I I +EYDPNR+A I L+ Y DGE RYIL P+ IGD I SG VPIK GNALP+S + Sbjct: 71 RNKDGISAVIKRLEYDPNRSANIALLSYRDGEYRYILAPKDVKIGDFISSGANVPIKPGNALPMSNI 137
BLAST of FC923257 vs. ExPASy Swiss-Prot
Match: RL2_BAUCH (50S ribosomal protein L2 OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=rplB PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 8.027e-13 Identity = 34/67 (50.75%), Postives = 46/67 (68.66%), Query Frame = 3 Query: 3 RNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAV 203 RN+ +I +I IEYDPNR+A I L+ Y DGE+RYI+ P+G +GD I+SG IK GN LP+ + Sbjct: 69 RNKDNIAAKIERIEYDPNRSANIALVLYQDGERRYIIAPKGLKVGDQIISGHHATIKTGNTLPIQNI 135
BLAST of FC923257 vs. ExPASy Swiss-Prot
Match: RL2_XYLFT (50S ribosomal protein L2 OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=rplB PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.048e-12 Identity = 35/64 (54.69%), Postives = 47/64 (73.44%), Query Frame = 3 Query: 3 RNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPL 194 R+++ I R+ IEYDPNR A+I L+ Y DGE+ YI+ P+G GD I+SG VPIK+GN+LPL Sbjct: 69 RDKEAIPARVERIEYDPNRTAHIALLCYIDGERCYIIAPKGLKEGDKIISGPNVPIKLGNSLPL 132
BLAST of FC923257 vs. ExPASy Swiss-Prot
Match: RL2_XYLFM (50S ribosomal protein L2 OS=Xylella fastidiosa (strain M12) GN=rplB PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.048e-12 Identity = 35/64 (54.69%), Postives = 47/64 (73.44%), Query Frame = 3 Query: 3 RNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPL 194 R+++ I R+ IEYDPNR A+I L+ Y DGE+ YI+ P+G GD I+SG VPIK+GN+LPL Sbjct: 69 RDKEAIPARVERIEYDPNRTAHIALLCYIDGERCYIIAPKGLKEGDKIISGPNVPIKLGNSLPL 132
BLAST of FC923257 vs. ExPASy Swiss-Prot
Match: RL2_XYLF2 (50S ribosomal protein L2 OS=Xylella fastidiosa (strain M23) GN=rplB PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.048e-12 Identity = 35/64 (54.69%), Postives = 47/64 (73.44%), Query Frame = 3 Query: 3 RNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPL 194 R+++ I R+ IEYDPNR A+I L+ Y DGE+ YI+ P+G GD I+SG VPIK+GN+LPL Sbjct: 69 RDKEAIPARVERIEYDPNRTAHIALLCYIDGERCYIIAPKGLKEGDKIISGPNVPIKLGNSLPL 132
BLAST of FC923257 vs. ExPASy Swiss-Prot
Match: RL2_NITMU (50S ribosomal protein L2 OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=rplB PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.048e-12 Identity = 32/64 (50.00%), Postives = 46/64 (71.88%), Query Frame = 3 Query: 3 RNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPL 194 RN+ I R+ +EYDPNR+A + L+ Y DGE+RY++ P+G + G ++SG + PIK GNALPL Sbjct: 69 RNKDGIAARVERLEYDPNRSANLALLCYSDGERRYVIAPKGIVPGMQLMSGADAPIKNGNALPL 132
BLAST of FC923257 vs. ExPASy Swiss-Prot
Match: RL2_HAEIN (50S ribosomal protein L2 OS=Haemophilus influenzae GN=rplB PE=3 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 1.048e-12 Identity = 34/64 (53.12%), Postives = 46/64 (71.88%), Query Frame = 3 Query: 3 RNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPL 194 RN+ DI + +EYDPNR+A I L+ Y DGE+RYIL P+G +GD I +G PIK+GN+LP+ Sbjct: 69 RNKLDIPAVVERLEYDPNRSANIALVLYKDGERRYILAPKGLSVGDQIQAGINSPIKVGNSLPM 132
BLAST of FC923257 vs. ExPASy Swiss-Prot
Match: RL2_HAEIG (50S ribosomal protein L2 OS=Haemophilus influenzae (strain PittGG) GN=rplB PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.048e-12 Identity = 34/64 (53.12%), Postives = 46/64 (71.88%), Query Frame = 3 Query: 3 RNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPL 194 RN+ DI + +EYDPNR+A I L+ Y DGE+RYIL P+G +GD I +G PIK+GN+LP+ Sbjct: 69 RNKLDIPAVVERLEYDPNRSANIALVLYKDGERRYILAPKGLSVGDQIQAGINSPIKVGNSLPM 132
BLAST of FC923257 vs. ExPASy Swiss-Prot
Match: RL2_HAEIE (50S ribosomal protein L2 OS=Haemophilus influenzae (strain PittEE) GN=rplB PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.048e-12 Identity = 34/64 (53.12%), Postives = 46/64 (71.88%), Query Frame = 3 Query: 3 RNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPL 194 RN+ DI + +EYDPNR+A I L+ Y DGE+RYIL P+G +GD I +G PIK+GN+LP+ Sbjct: 69 RNKLDIPAVVERLEYDPNRSANIALVLYKDGERRYILAPKGLSVGDQIQAGINSPIKVGNSLPM 132 The following BLAST results are available for this feature:
BLAST of FC923257 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923257 ID=FC923257; Name=FC923257; organism=Citrus clementina; type=EST; length=764bpback to top |