FC923257
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923257 vs. ExPASy Swiss-Prot
Match: RK2_MAIZE (50S ribosomal protein L2, chloroplastic OS=Zea mays GN=rpl2-A PE=2 SV=2) HSP 1 Score: 128.257 bits (321), Expect = 4.684e-29 Identity = 59/65 (90.77%), Postives = 63/65 (96.92%), Query Frame = 3 Query: 3 RNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLS 197 RN+KDI GRI+TIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGT+VPI MGNALPL+ Sbjct: 67 RNQKDISGRIITIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTKVPISMGNALPLT 131
BLAST of FC923257 vs. ExPASy Swiss-Prot
Match: RK2_EPIVI (50S ribosomal protein L2, plastid OS=Epifagus virginiana GN=rpl2-A PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.780e-28 Identity = 58/65 (89.23%), Postives = 63/65 (96.92%), Query Frame = 3 Query: 3 RNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLS 197 RNEK IYGRI+TIEYDPNRNAYICLIHYGDG+KRYILHPRGAIIGDT+VSGTEVPI +GNALPL+ Sbjct: 67 RNEKYIYGRIITIEYDPNRNAYICLIHYGDGDKRYILHPRGAIIGDTLVSGTEVPIIIGNALPLT 131
BLAST of FC923257 vs. ExPASy Swiss-Prot
Match: RK2_ORYSJ (50S ribosomal protein L2, chloroplastic OS=Oryza sativa subsp. japonica GN=rpl2-A PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.325e-28 Identity = 59/65 (90.77%), Postives = 62/65 (95.38%), Query Frame = 3 Query: 3 RNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLS 197 RN+KDI GRIVTIEYDPNRNAYICLIHYGDGEK YILHPRGAIIGDTIVSGT+VPI MGNALPL+ Sbjct: 67 RNQKDISGRIVTIEYDPNRNAYICLIHYGDGEKGYILHPRGAIIGDTIVSGTKVPISMGNALPLT 131
BLAST of FC923257 vs. ExPASy Swiss-Prot
Match: RK2_ORYSI (50S ribosomal protein L2, chloroplastic OS=Oryza sativa subsp. indica GN=rpl2-A PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.325e-28 Identity = 59/65 (90.77%), Postives = 62/65 (95.38%), Query Frame = 3 Query: 3 RNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLS 197 RN+KDI GRIVTIEYDPNRNAYICLIHYGDGEK YILHPRGAIIGDTIVSGT+VPI MGNALPL+ Sbjct: 67 RNQKDISGRIVTIEYDPNRNAYICLIHYGDGEKGYILHPRGAIIGDTIVSGTKVPISMGNALPLT 131
BLAST of FC923257 vs. ExPASy Swiss-Prot
Match: RK2_ORYSA (50S ribosomal protein L2, chloroplastic OS=Oryza sativa GN=rpl2-A PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.325e-28 Identity = 59/65 (90.77%), Postives = 62/65 (95.38%), Query Frame = 3 Query: 3 RNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLS 197 RN+KDI GRIVTIEYDPNRNAYICLIHYGDGEK YILHPRGAIIGDTIVSGT+VPI MGNALPL+ Sbjct: 67 RNQKDISGRIVTIEYDPNRNAYICLIHYGDGEKGYILHPRGAIIGDTIVSGTKVPISMGNALPLT 131
BLAST of FC923257 vs. ExPASy Swiss-Prot
Match: RK2_ORYNI (50S ribosomal protein L2, chloroplastic OS=Oryza nivara GN=rpl2-A PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.325e-28 Identity = 59/65 (90.77%), Postives = 62/65 (95.38%), Query Frame = 3 Query: 3 RNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLS 197 RN+KDI GRIVTIEYDPNRNAYICLIHYGDGEK YILHPRGAIIGDTIVSGT+VPI MGNALPL+ Sbjct: 67 RNQKDISGRIVTIEYDPNRNAYICLIHYGDGEKGYILHPRGAIIGDTIVSGTKVPISMGNALPLT 131
BLAST of FC923257 vs. ExPASy Swiss-Prot
Match: RK2_WHEAT (50S ribosomal protein L2, chloroplastic OS=Triticum aestivum GN=rpl2-A PE=3 SV=2) HSP 1 Score: 125.176 bits (313), Expect = 3.966e-28 Identity = 59/65 (90.77%), Postives = 62/65 (95.38%), Query Frame = 3 Query: 3 RNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLS 197 RN+KDI GRIVTIE DPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGT+VPI MGNALPL+ Sbjct: 67 RNQKDISGRIVTIESDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTKVPISMGNALPLT 131
BLAST of FC923257 vs. ExPASy Swiss-Prot
Match: RK2_SORBI (50S ribosomal protein L2, chloroplastic OS=Sorghum bicolor GN=rpl2-A PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 8.834e-28 Identity = 58/62 (93.55%), Postives = 60/62 (96.77%), Query Frame = 3 Query: 3 RNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNAL 188 RN+KDI GRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGT+VPI MGNAL Sbjct: 67 RNQKDISGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTKVPISMGNAL 128
BLAST of FC923257 vs. ExPASy Swiss-Prot
Match: RK2_PEA (50S ribosomal protein L2, chloroplastic OS=Pisum sativum GN=rpl2 PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 8.834e-28 Identity = 59/65 (90.77%), Postives = 63/65 (96.92%), Query Frame = 3 Query: 3 RNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLS 197 RNEKDIYGRI+TIEYDPNRNA+ICLIHYGDGEKRYILHP+ AIIGDTIV GTEVPIKMGNALPL+ Sbjct: 67 RNEKDIYGRIITIEYDPNRNAHICLIHYGDGEKRYILHPK-AIIGDTIVYGTEVPIKMGNALPLT 130
BLAST of FC923257 vs. ExPASy Swiss-Prot
Match: RK2_CUSRE (50S ribosomal protein L2, plastid OS=Cuscuta reflexa GN=rpl2 PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.384e-27 Identity = 57/65 (87.69%), Postives = 63/65 (96.92%), Query Frame = 3 Query: 3 RNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLS 197 RN+K+IYGRIVTIEYDPNRNA+ICLIHY +GEKRYILHPRGAIIGDTIVSGTEV IK+GNALPL+ Sbjct: 67 RNKKNIYGRIVTIEYDPNRNAHICLIHYRNGEKRYILHPRGAIIGDTIVSGTEVSIKIGNALPLT 131 The following BLAST results are available for this feature:
BLAST of FC923257 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923257 ID=FC923257; Name=FC923257; organism=Citrus clementina; type=EST; length=764bpback to top |