FC923258
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923258 vs. ExPASy Swiss-Prot
Match: TRAF7_HUMAN (E3 ubiquitin-protein ligase TRAF7 OS=Homo sapiens GN=TRAF7 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.798e-12 Identity = 44/112 (39.29%), Postives = 65/112 (58.04%), Query Frame = 1 Query: 28 GPVGQVYAMAVGNDLLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCWDQLLLSCSLDKTIKVW 363 GPV + ++G DLLF+G+ D I W T C + +L+GH V++L + KLYSGS D +I VW+++ LQ + T+ H + V +L+ +L S SL K IKVW Sbjct: 397 GPVWCLCVYSMG-DLLFSGSSDKTIKVWDTCTTYKCQK---TLEGHDGIVLALCIQGCKLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNVLFSGSL-KAIKVW 503
BLAST of FC923258 vs. ExPASy Swiss-Prot
Match: SCONB_EMENI (Sulfur metabolite repression control protein OS=Emericella nidulans GN=sconB PE=3 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 7.798e-12 Identity = 50/164 (30.49%), Postives = 75/164 (45.73%), Query Frame = 1 Query: 19 SLSGPVGQVYAMAVGNDLLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCWDQLLLSCSLDKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDL 510 + G V + +++L G+ D I W T E +L+GH + L KL SGSMD +I+VWN T +CI T T H V+ L +L S S+DKT+K+W D + + + V D+ + V S +D +VR +DL Sbjct: 344 TFKGHTNGVMCLQFEDNILATGSYDTTIKIWD----TETGEELRTLRGHESGIRCLQFDDTKLISGSMDRTIKVWNWRTGECISTYTGHRGGVIGLHFDASILASGSVDKTVKIWNFEDKSTFSLRGHTDWVNAVRV-----DTSSRTVFSAS-DDCTVRLWDL 497
BLAST of FC923258 vs. ExPASy Swiss-Prot
Match: FBXW7_MOUSE (F-box/WD repeat-containing protein 7 OS=Mus musculus GN=Fbxw7 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.798e-12 Identity = 50/163 (30.67%), Postives = 76/163 (46.63%), Query Frame = 1 Query: 22 LSGPVGQVYAMAVGNDLLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCWDQLLLSCSLDKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDL 510 L G V V + + +G D + W T C +L+GH+ V SL + SGS+D SIRVW++ET CI TLT H S+ + D +L+S + D T+K+W +G T +H C K ++ S +D +V+ +DL Sbjct: 419 LMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETET-CLH---TLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIW-DIKTGQCLQTLQGPSKHQSAVTC---LQFNKNFVITSSDDGTVKLWDL 573
BLAST of FC923258 vs. ExPASy Swiss-Prot
Match: Y2800_ANASP (Uncharacterized WD repeat-containing protein alr2800 OS=Anabaena sp. (strain PCC 7120) GN=alr2800 PE=4 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.963e-11 Identity = 58/217 (26.73%), Postives = 101/217 (46.54%), Query Frame = 1 Query: 7 NTDLSLSGPVGQVYAMAVGNDLLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGANK--LYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCWDQ--LLLSCSLDKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPSFAERGKIFA-KQEIRAIQLGPGGLFFTGDGTGQ-VRVWQWCNG 639 NTD +L PV A + +L +G+ D + W + + +SL+GH+ + + + L S S D+S+R+WN+ T QC Q L EHT V +++ Q ++ + S D T+K+W + L+ H+++ +L + PD + +L + D SVR +D + G + + + P G T Q V++W W G Sbjct: 935 NTDWAL--PV----AFSPDRQILASGSNDKTVKLWDWQTG----KYISSLEGHTDFIYGIAFSPDSQTLASASTDSSVRLWNISTGQCFQILLEHTDWVYAVVFHPQGKIIATGSADCTVKLWNISTGQCLKTLSEHSDK--ILGMAWSPDGQ---LLASASADQSVRLWDCCTGRCVGILRGHSNRVYSAIFSPNGEIIATCSTDQTVKIWDWQQG 1136
BLAST of FC923258 vs. ExPASy Swiss-Prot
Match: SCON2_NEUCR (Sulfur controller 2 OS=Neurospora crassa GN=scon-2 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.870e-11 Identity = 34/70 (48.57%), Postives = 46/70 (65.71%), Query Frame = 1 Query: 154 LKGHSLAVVSLVVGANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCWDQLLLSCSLDKTIKVW 363 LKGH V L + N L +GS D +I++WN+ET +CI+TL HT+ + +L D L+S SLD TIKVW Sbjct: 290 LKGHENGVTCLQLDDNILATGSYDTTIKIWNIETEECIRTLVGHTAGIRALQFDDSKLISGSLDHTIKVW 359 HSP 2 Score: 67.3958 bits (163), Expect = 8.621e-11 Identity = 39/114 (34.21%), Postives = 61/114 (53.51%), Query Frame = 1 Query: 22 LSGPVGQVYAMAVGNDLLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCWDQLLLSCSLDKTIKVW 363 L G V + + +++L G+ D I W T C +L GH+ + +L +KL SGS+D++I+VWN T +C+ T HT V+S+ LL S S DKT+K++ Sbjct: 290 LKGHENGVTCLQLDDNILATGSYDTTIKIWNIE-TEECIR---TLVGHTAGIRALQFDDSKLISGSLDHTIKVWNWHTGECLSTFAAHTDSVISVHFDGHLLASGSSDKTVKIF 399
BLAST of FC923258 vs. ExPASy Swiss-Prot
Match: MET30_YEAST (F-box protein MET30 OS=Saccharomyces cerevisiae GN=MET30 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.054e-11 Identity = 40/112 (35.71%), Postives = 58/112 (51.79%), Query Frame = 1 Query: 28 GPVGQVYAMAVGNDLLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCWDQLLLSCSLDKTIKVW 363 G + V + LLF G+ D I W + L GHS V +L KL +GS+D +IRVWN T +CI T H+ V+S+ + ++++S S DKT+KVW Sbjct: 300 GHMDGVLTLQFNYRLLFTGSYDSTIGIWDLFTG----KLIRRLSGHSDGVKTLYFDDRKLITGSLDKTIRVWNYITGECISTYRGHSDSVLSVDSYQKVIVSGSADKTVKVW 407
BLAST of FC923258 vs. ExPASy Swiss-Prot
Match: SEL10_CAEEL (F-box/WD repeat-containing protein sel-10 OS=Caenorhabditis elegans GN=sel-10 PE=1 SV=3) HSP 1 Score: 67.3958 bits (163), Expect = 8.621e-11 Identity = 58/207 (28.02%), Postives = 91/207 (43.96%), Query Frame = 1 Query: 19 SLSGPVGQVYAMAVGNDLLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCWDQLLLSC--SLDKTIKVW-FATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCN-DNSVRFYDLPSFAERGKIFA-KQEIRAIQLGPGGLFFTGDGTGQVRVW 624 +L G V MA+ +L G++D + W + A+L GH AV + + SG D ++++WN T +CI+TLT H + V SLL + + C SLD +I+VW F G V G +L G +L SCN D+ VR +D+ + + I ++Q + T G V++W Sbjct: 333 TLQGHTSTVRCMAMAGSILVTGSRDTTLRVWDVESGRHL----ATLHGHHAAVRCVQFDGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALL----QGHTSLTSGMQLRGN--ILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRNMVATSSDDGTVKLW 529 The following BLAST results are available for this feature:
BLAST of FC923258 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923258 ID=FC923258; Name=FC923258; organism=Citrus clementina; type=EST; length=713bpback to top |