FC923261
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923261 vs. ExPASy Swiss-Prot
Match: SRP54_STRMU (Signal recognition particle protein OS=Streptococcus mutans GN=ffh PE=3 SV=3) HSP 1 Score: 111.309 bits (277), Expect = 1.281e-25 Identity = 55/127 (43.31%), Postives = 86/127 (67.72%), Query Frame = 1 Query: 280 FGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKNRE 660 F LT L+ + L+G+ L+++++ E ++IR ALLEADV+LPVV+ F++ V ++AVG +I + P QQ++KIV +EL ++G E +E+ + PT+I++ GLQG GKTT + KLAN L E Sbjct: 3 FESLTERLQGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVGHEVIDTLDPSQQIIKIVNEELTAVLGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLVKEE 129 HSP 2 Score: 25.0238 bits (53), Expect = 1.281e-25 Identity = 9/19 (47.37%), Postives = 14/19 (73.68%), Query Frame = 3 Query: 651 EQGKSCMLVAGDVYRPAAI 707 E+ +++A D+YRPAAI Sbjct: 128 EENARPLMIAADIYRPAAI 146
BLAST of FC923261 vs. ExPASy Swiss-Prot
Match: SRP54_HAEIN (Signal recognition particle protein OS=Haemophilus influenzae GN=ffh PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 3.681e-25 Identity = 59/129 (45.74%), Postives = 80/129 (62.02%), Query Frame = 1 Query: 277 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKNRER 663 MF L+ L + G+ LT++NI E +R++R ALLEADV+LPVVR F+ V E A+G + + + P Q+ +KIV+ EL K MG L A P VIL+AGLQG GKTT KLA +L+ R + Sbjct: 1 MFENLSDRLSKTLRNITGKGRLTEDNIKETLREVRMALLEADVALPVVREFIAKVKESALGEEVNKSLTPGQEFLKIVQRELEKAMGEANESLNLATQPPAVILMAGLQGAGKTTSVGKLAKFLRERHK 129 HSP 2 Score: 25.0238 bits (53), Expect = 3.681e-25 Identity = 10/16 (62.50%), Postives = 13/16 (81.25%), Query Frame = 3 Query: 660 KSCMLVAGDVYRPAAI 707 K ++V+ DVYRPAAI Sbjct: 130 KKVLVVSADVYRPAAI 145
BLAST of FC923261 vs. ExPASy Swiss-Prot
Match: SRP54_BUCAP (Signal recognition particle protein OS=Buchnera aphidicola subsp. Schizaphis graminum GN=ffh PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.003e-24 Identity = 58/141 (41.13%), Postives = 94/141 (66.67%), Query Frame = 1 Query: 277 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKNRERVACSLLEMCTDL 699 MF LT L + K+ + LT+ENI + +R++R+ALLEADV+L V+++F+Q VS++A+G + + + P Q+ +KIV++EL+ MG + +L + P +IL+ GLQGVGKTT KLA ++K E+ +L + TD+ Sbjct: 1 MFNNLTERLSQSLRKIINKGRLTEENIKDTIREVRKALLEADVTLSVIKKFIQNVSKKAIGHEINKSLTPGQEFIKIVKNELILSMGEKNHDLNLSIQPPAIILVVGLQGVGKTTTLVKLAKWIK--EKYKKKILTVSTDI 139
BLAST of FC923261 vs. ExPASy Swiss-Prot
Match: SRP54_BUCAI (Signal recognition particle protein OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=ffh PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.549e-23 Identity = 54/127 (42.52%), Postives = 85/127 (66.93%), Query Frame = 1 Query: 277 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKNR 657 MF LT L + K+ + LT+ENI E +R++R+ALLEADV+L V+++F++ V ++++G + + + P Q+ +KIV+ EL+ MG + L F+ P VIL+ GLQG GKTT AKL ++KN+ Sbjct: 1 MFNNLTQRLSDSLKKILNKGRLTEENIKETIREVRKALLEADVALSVIKKFIENVKKKSIGHEINKSLTPGQEFIKIVKHELIFAMGEKNHSLNFSIEPPAVILVVGLQGSGKTTSLAKLGKWIKNK 127
BLAST of FC923261 vs. ExPASy Swiss-Prot
Match: SRP54_RICPR (Signal recognition particle protein OS=Rickettsia prowazekii GN=ffh PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 9.923e-22 Identity = 53/131 (40.46%), Postives = 81/131 (61.83%), Query Frame = 1 Query: 277 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGG--EVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKNRER 663 MF LT L ++KL LT+ I MRD+R ALLE+DV+LPV++ F++ V ++A+G +I+ V P Q ++KI+ +E++ L+ ++L P +L+ GLQG GKTT S KLA LKN+ + Sbjct: 1 MFKTLTQNLTKIFDKLVNSGILTENQIDTAMRDVRVALLESDVALPVIKGFIEEVKQKALGQEVIKSVSPGQMIIKIIHEEMINLLASTESTTKLNLNAKPPVNLLIVGLQGGGKTTASGKLALRLKNQNK 131 HSP 2 Score: 23.483 bits (49), Expect = 9.923e-22 Identity = 10/17 (58.82%), Postives = 12/17 (70.59%), Query Frame = 3 Query: 654 QGKSCMLVAGDVYRPAA 704 Q K +LV+ D YRPAA Sbjct: 129 QNKKVLLVSLDTYRPAA 145
BLAST of FC923261 vs. ExPASy Swiss-Prot
Match: SRP54_RICBR (Signal recognition particle protein OS=Rickettsia bellii (strain RML369-C) GN=ffh PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 9.923e-22 Identity = 54/131 (41.22%), Postives = 84/131 (64.12%), Query Frame = 1 Query: 277 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSEL-VFAKSRPTV-ILLAGLQGVGKTTVSAKLANYLKNRER 663 MF LT L +++L LT+E I +RDIR ALLE+DV+LPV++ FV V ++A+G +I+ V P Q ++KI+ +E++ ++ E+ + ++P V +L+ GLQG GKTT S KLA LKN+ + Sbjct: 1 MFKTLTQNLMKIFDRLVSSGLLTEEQIDAALRDIRVALLESDVALPVIKNFVAEVKQKALGQEVIKSVSPGQMIIKIIHEEMINILSSSEDEIKLNLNAKPPVNLLMVGLQGSGKTTASGKLALCLKNQNK 131 HSP 2 Score: 23.483 bits (49), Expect = 9.923e-22 Identity = 10/17 (58.82%), Postives = 12/17 (70.59%), Query Frame = 3 Query: 654 QGKSCMLVAGDVYRPAA 704 Q K +LV+ D YRPAA Sbjct: 129 QNKKVLLVSLDTYRPAA 145
BLAST of FC923261 vs. ExPASy Swiss-Prot
Match: SRP54_RICFE (Signal recognition particle protein OS=Rickettsia felis GN=ffh PE=3 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 7.066e-21 Identity = 56/131 (42.75%), Postives = 80/131 (61.07%), Query Frame = 1 Query: 277 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSE--LVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKNRER 663 MF LT L ++KL LT+ I MRDIR ALLE+DV+LPV++ F+ V ++A+G +I+ V P Q ++KI+ +E++ L+ SE L P L+ GLQG GKTT S+KLA LKN+ + Sbjct: 1 MFKTLTQNLTKIFDKLVSSGILTEAQIDAAMRDIRVALLESDVALPVIKDFIAEVKQKALGQEVIKSVSPGQMIIKIIHEEMINLLASSESETKLNLNSKPPVNFLMVGLQGSGKTTASSKLALRLKNQNK 131
BLAST of FC923261 vs. ExPASy Swiss-Prot
Match: SRP54_BUCBP (Signal recognition particle protein OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=ffh PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.066e-21 Identity = 51/127 (40.16%), Postives = 80/127 (62.99%), Query Frame = 1 Query: 277 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKNR 657 MF LT K+ + LT++NI E +R+IR ALLEADV+LPVV+ F+ ++ + +G + + + P Q+L+KIV+ EL ++G E L + + P +IL+ GLQG GKTT +AKL ++ + Sbjct: 1 MFNNLTQRFLKIIKKISNKGRLTEKNIKETLREIRIALLEADVALPVVKNFIPSIQKSVIGNQVNKSLTPGQELIKIVKKELTLILGKENHSLNLSVTPPAIILMIGLQGSGKTTTTAKLGQLIRTK 127
BLAST of FC923261 vs. ExPASy Swiss-Prot
Match: SRP54_RICCN (Signal recognition particle protein OS=Rickettsia conorii GN=ffh PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.574e-20 Identity = 55/131 (41.98%), Postives = 80/131 (61.07%), Query Frame = 1 Query: 277 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSE--LVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKNRER 663 MF LT L ++KL LT+ I MRDIR ALLE+DV+LPV++ F+ V ++A+G +I+ V P Q ++KI+ +E++ L+ SE L P L+ GLQG GKTT S+KLA L+N+ + Sbjct: 1 MFKTLTQNLTKIFDKLVSSGILTEAQIDAAMRDIRVALLESDVALPVIKDFIAEVKQKALGQEVIKSVSPGQMIIKIIHEEMINLLASSKSETKLNLNSKPPVNFLMVGLQGSGKTTASSKLALRLRNQNK 131
BLAST of FC923261 vs. ExPASy Swiss-Prot
Match: SRP54_RICTY (Signal recognition particle protein OS=Rickettsia typhi GN=ffh PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.507e-20 Identity = 53/131 (40.46%), Postives = 80/131 (61.07%), Query Frame = 1 Query: 277 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVS--ELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKNRER 663 MF LT L +++L LT+ I MRD+R ALLE+DV+LPV++ F+ V ++A+G +I+ V P Q ++KI+ +E++ L+ S +L P +L+ GLQG GKTT S KLA LKN+ + Sbjct: 1 MFKTLTQNLTKIFDRLVNSGILTENQIDTAMRDVRVALLESDVALPVIKGFIAEVKQKALGQEVIKSVSPGQMIIKIIHEEMINLLASSESTTKLNLNSKPPVNLLMVGLQGGGKTTASGKLALLLKNQNK 131 The following BLAST results are available for this feature:
BLAST of FC923261 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923261 ID=FC923261; Name=FC923261; organism=Citrus clementina; type=EST; length=708bpback to top |