FC923270

Overview
NameFC923270
Unique NameFC923270
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length724
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: APK2A_ARATH (Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=1 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.206e-37
Identity = 93/231 (40.26%), Postives = 140/231 (60.61%), Query Frame = 3
Query:   39 YTYKELKKITSRFK--HRLGQGGYGSVFRGKLFNR----------IPVAVKML--EHLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCRKIM 689
            +T+ ELK  T  F+  + LG+GG+G VF+G +             I VAVK L  E  +G+ +E++ EV  +G++ H ++V L+G+C+EG  R L+YEFMP GSLE  +F +      +PL+W    K+A G A+G+ +LH+  +Q +++ D K  NILLD +F  K+SDFGLAK      +    T   GT GY APE  +   G ++ KSDVYS+G++LLE++  R+ M
Sbjct:   74 FTFNELKNATKNFRQDNLLGEGGFGCVFKGWIDQTSLTASRPGSGIVVAVKQLKPEGFQGH-KEWLTEVNYLGQLSHPNLVLLVGYCAEGENRLLVYEFMPKGSLENHLFRR----GAQPLTWAIRMKVAVGAAKGLTFLHEAKSQ-VIYRDFKAANILLDADFNAKLSDFGLAKAGPTGDNTHVSTKVIGTHGYAAPEYVAT--GRLTAKSDVYSFGVVLLELISGRRAM 296          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: PAM74_ARATH (Probable LRR receptor-like serine/threonine-protein kinase PAM74 OS=Arabidopsis thaliana GN=PAM74 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 9.370e-37
Identity = 84/213 (39.44%), Postives = 124/213 (58.22%), Query Frame = 3
Query:   36 RYTYKELKKITSRFKHRLGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNG-QEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 671
            R+TY E+ K+T+ F+  +G+GG+G V  G +     VAVK+L      G + F  EV  + R+HH ++V L+G+C E +  ALIYEF+P G L + +  K+  S    ++W    +IA   A G+EYLH GC   I+H DIK  NILLD   + K++DFGL++           T   GT GY+ PE +      +  KSDVYS+G++LLE++
Sbjct:  568 RFTYSEVIKMTNNFQRVVGEGGFGVVCHGTINGSEQVAVKVLSQSSSQGYKHFKAEVDLLLRVHHTNLVSLVGYCDERDHLALIYEFLPKGDLRQHLSGKSGGSF---INWGNRLRIALEAALGLEYLHSGCTPPIVHRDIKTTNILLDEQLKAKLADFGLSRSFPIGGETHISTVVAGTPGYLDPEYYQTT--RLGEKSDVYSFGIVLLEII 775          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: CRK27_ARATH (Cysteine-rich receptor-like protein kinase 27 OS=Arabidopsis thaliana GN=CRK27 PE=2 SV=2)

HSP 1 Score: 153.295 bits (386), Expect = 1.224e-36
Identity = 82/222 (36.94%), Postives = 132/222 (59.46%), Query Frame = 3
Query:   15 YRTVNPIRYTYKELKKITSRFK--HRLGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNGQ-EFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 671
            + + + + + ++ ++  T  F   +++G+GG+G V++G L + + +AVK L    G G  EF  EV  + ++ H ++V+L GF  + + R L+YEF+PN SL++F+F        + L WEK   I  GV+RG+ YLH+G    I+H D+K  N+LLD    PKISDFG+A+    D +        GT GY+APE      G  S K+DVYS+G+++LE++
Sbjct:  313 FESTDSLHFDFETIRVATDDFSLTNKIGEGGFGVVYKGHLPDGLEIAVKRLSIHSGQGNAEFKTEVLLMTKLQHKNLVKLFGFSIKESERLLVYEFIPNTSLDRFLFDPIKQ---KQLDWEKRYNIIVGVSRGLLYLHEGSEFPIIHRDLKSSNVLLDEQMLPKISDFGMARQFDFDNTQAVTRRVVGTYGYMAPEYAMH--GRFSVKTDVYSFGVLVLEII 529          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: Y5613_ARATH (Probable receptor-like protein kinase At5g61350 OS=Arabidopsis thaliana GN=At5g61350 PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.598e-36
Identity = 88/222 (39.64%), Postives = 128/222 (57.66%), Query Frame = 3
Query:   39 YTYKELKKITSRFKHRL--GQGGYGSVFRGKLFNRIPVAVKMLEHLKGNG-QEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIF-SKTNSSSHRP-LSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCRKIM 689
            + + EL+  T  F      G GG+G V+ G++     VA+K        G  EF  E+  + ++ H H+V L+GFC E     L+YE+M NG L   ++ SK N  +  P LSW++  +I  G ARG+ YLH G  Q I+H D+K  NILLD N   K+SDFGL+K    D   VS TA +G+ GY+ PE F R   +++ KSDVYS+G++L E++  R ++
Sbjct:  513 FPFTELQTATQNFDENAVCGVGGFGKVYIGEIDGGTQVAIKRGSQSSEQGINEFQTEIQMLSKLRHRHLVSLIGFCDENKEMILVYEYMSNGPLRDHLYGSKENDPNPIPTLSWKQRLEICIGSARGLHYLHTGAAQGIIHRDVKTTNILLDENLVAKVSDFGLSKDAPMDEGHVS-TAVKGSFGYLDPEYFRRQ--QLTDKSDVYSFGVVLFEVLCARPVI 731          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: RKF1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana GN=RKF1 PE=1 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.598e-36
Identity = 86/214 (40.19%), Postives = 134/214 (62.62%), Query Frame = 3
Query:   39 YTYKELKKITSRFK--HRLGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNG-QEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 671
            +T +++K  T  F   +++G+GG+G+VF+G L +   VAVK L      G +EF+NE+  I  + H ++V+L GFC E  +  L YE+M N SL   +FS  +     P+ W    KI  G+A+G+ +LH+    + +H DIK  NILLD +  PKISDFGLA+L  ++ + +S T   GT GY+APE     +G +++K+DVYS+G+++LE+V
Sbjct:  669 FTLRQIKFATDDFNPTNKIGEGGFGAVFKGVLADGRVVAVKQLSSKSRQGNREFLNEIGAISCLQHPNLVKLHGFCVERAQLLLAYEYMENNSLSSALFSPKHKQI--PMDWPTRFKICCGIAKGLAFLHEESPLKFVHRDIKATNILLDKDLTPKISDFGLARLDEEEKTHIS-TKVAGTIGYMAPEY--ALWGYLTFKADVYSFGVLVLEIV 877          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: CRK22_ARATH (Cysteine-rich receptor-like protein kinase 22 OS=Arabidopsis thaliana GN=CRK22 PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.087e-36
Identity = 85/224 (37.95%), Postives = 133/224 (59.38%), Query Frame = 3
Query:   21 TVNPIRYTYKELKKITSRFK--HRLGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNG-QEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCRK 683
            T N ++Y +K ++  T++F   ++LG+G +G V++GK  N   VAVK L  + G   ++F NE   + +I H ++ RLLGFC +G+ + LIYEF+ N SL+ F+F          L W +  KI  G+A+G+ +LHQ     I++ D K  NILLD +  PKISDFG+A +   + S  +      T  Y++PE      G+ S KSDVYS+G+++LE++  +K
Sbjct:  335 TTNSLQYEFKTIEAATNKFSKSNKLGEGRFGEVYKGKFSNGTEVAVKRLSKVSGQDTKKFRNEAVLVSKIQHRNLARLLGFCLQGDGKFLIYEFVLNKSLDYFLFDPEKQGE---LDWTRRYKIIGGIAQGILHLHQDPQLTIIYRDFKASNILLDADMNPKISDFGMATVFGMEESRGNTNWIAETFVYMSPEYAVH--GKFSMKSDVYSFGILILEIISGKK 553          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: CRK1_ARATH (Cysteine-rich receptor-like protein kinase 1 OS=Arabidopsis thaliana GN=CRK1 PE=2 SV=2)

HSP 1 Score: 152.525 bits (384), Expect = 2.087e-36
Identity = 88/220 (40.00%), Postives = 137/220 (62.27%), Query Frame = 3
Query:   33 IRYTYKELKKITSRFKH--RLGQGGYGSVFRGKLFNRIPVAVKMLE-HLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCRK 683
            + + Y+ L+K T  F    +LGQGG GSV++G L +   VAVK L  + +    +F NEV  I  + H ++VRLLG   EG +  L+YE++ N SL++ +F K   ++   LSW++   I  G++ G+EYLH+G   +I+H DIK  NILLD N  PKI+DFGL +    D +  + T   GT GY+APE   +  G+++ K+DVY++G++++E+V  +K
Sbjct:  304 VNFKYEMLEKATESFHDSMKLGQGGAGSVYKGILPDGRIVAVKKLFFNTREWADQFFNEVNLISGVQHKNLVRLLGCSIEGPKSLLVYEYVHNRSLDQILFMK---NTVHILSWKQRFNIIIGISEGLEYLHRGSEVKIIHRDIKTSNILLDRNLSPKIADFGLIRSMGTDKTQTN-TGIAGTLGYLAPEYLIK--GQLTEKADVYAFGVLIIEIVTGKK 517          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: CLV1_ARATH (Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana GN=CLV1 PE=1 SV=3)

HSP 1 Score: 152.525 bits (384), Expect = 2.087e-36
Identity = 84/202 (41.58%), Postives = 125/202 (61.88%), Query Frame = 3
Query:   87 LGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNGQE---FINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCRK 683
            +G+GG G V+RG + N + VA+K L   +G G+    F  E+ T+GRI H HIVRLLG+ +  +   L+YE+MPNGSL + +    + S    L WE   ++A   A+G+ YLH  C+  ILH D+K +NILLD +F+  ++DFGLAK      +   +++  G+ GYIAPE       +V  KSDVYS+G++LLE++  +K
Sbjct:  698 IGKGGAGIVYRGSMPNNVDVAIKRLVG-RGTGRSDHGFTAEIQTLGRIRHRHIVRLLGYVANKDTNLLLYEYMPNGSLGELL----HGSKGGHLQWETRHRVAVEAAKGLCYLHHDCSPLILHRDVKSNNILLDSDFEAHVADFGLAKFLVDGAASECMSSIAGSYGYIAPEYAYTL--KVDEKSDVYSFGVVLLELIAGKK 892          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: Y1756_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07560 OS=Arabidopsis thaliana GN=At1g07560 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.726e-36
Identity = 90/214 (42.06%), Postives = 127/214 (59.35%), Query Frame = 3
Query:   36 RYTYKELKKITSRFKHRLGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNG-QEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAK-LCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 671
            RYTY E+  +T +F+  LG+GG+G V+ G +     VAVK+L      G +EF  EV  + R++H ++V L+G+C E +  ALIY++M NG L+K        S    +SW     IA   A G+EYLH GC   I+H D+K  NILLD   Q K++DFGL++     D S VS T   GT GY+  E +  N   +S KSDVYS+G++LLE++
Sbjct:  559 RYTYAEVLAMTKKFERVLGKGGFGMVYHGYINGTEEVAVKLLSPSSAQGYKEFKTEVELLLRVYHTNLVSLVGYCDEKDHLALIYQYMVNGDLKKHF------SGSSIISWVDRLNIAVDAASGLEYLHIGCKPLIVHRDVKSSNILLDDQLQAKLADFGLSRSFPIGDESHVS-TLVAGTFGYLDHEYYQTN--RLSEKSDVYSFGVVLLEII 763          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: NORK_PEA (Nodulation receptor kinase OS=Pisum sativum GN=NORK PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.561e-36
Identity = 86/222 (38.74%), Postives = 132/222 (59.46%), Query Frame = 3
Query:   21 TVNPIRYTYKELKKITSRFKHRLGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNG-QEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCRK 683
            +V P    Y EL   T ++K  +G+GG+GSV+RG L +   VAVK+       G +EF NE+  +  I H ++V LLG+C+E +++ L+Y FM NGSL   ++ +   +  + L W     IA G ARG+ YLH    + ++H D+K  NILLDH+   K++DFG +K   ++         RGTAGY+ PE +     ++S KSDV+S+G++LLE+V  R+
Sbjct:  581 SVKPFTLEYIELA--TEKYKTLIGEGGFGSVYRGTLDDGQEVAVKVRSATSTQGTREFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLYGEP--AKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDHSMCAKVADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQ--QLSEKSDVFSFGVVLLEIVSGRE 796          
The following BLAST results are available for this feature:
BLAST of FC923270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APK2A_ARATH4.206e-3740.26Protein kinase 2A, chloroplastic OS=Arabidopsis th... [more]
PAM74_ARATH9.370e-3739.44Probable LRR receptor-like serine/threonine-protei... [more]
CRK27_ARATH1.224e-3636.94Cysteine-rich receptor-like protein kinase 27 OS=A... [more]
Y5613_ARATH1.598e-3639.64Probable receptor-like protein kinase At5g61350 OS... [more]
RKF1_ARATH1.598e-3640.19Probable LRR receptor-like serine/threonine-protei... [more]
CRK22_ARATH2.087e-3637.95Cysteine-rich receptor-like protein kinase 22 OS=A... [more]
CRK1_ARATH2.087e-3640.00Cysteine-rich receptor-like protein kinase 1 OS=Ar... [more]
CLV1_ARATH2.087e-3641.58Receptor protein kinase CLAVATA1 OS=Arabidopsis th... [more]
Y1756_ARATH2.726e-3642.06Probable LRR receptor-like serine/threonine-protei... [more]
NORK_PEA3.561e-3638.74Nodulation receptor kinase OS=Pisum sativum GN=NOR... [more]

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Properties
Property NameValue
Genbank descriptionC31702H06EF StrClemenN Citrus clementina cDNA clone C31702H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923270 ID=FC923270; Name=FC923270; organism=Citrus clementina; type=EST; length=724bp
AGTTCCTCGAAAACTACAGGACCGTCAATCCCATCCGATATACTTACAAA
GAGCTGAAGAAAATAACAAGCAGATTTAAGCACAGGCTCGGCCAGGGAGG
TTACGGAAGCGTGTTCAGAGGAAAACTCTTCAACAGAATTCCAGTTGCTG
TCAAGATGTTGGAACATTTAAAAGGAAATGGACAAGAGTTCATCAATGAA
GTGGCCACAATTGGCAGGATTCACCACTTCCACATTGTTCGGCTTCTGGG
ATTTTGCTCTGAAGGAAACAGACGTGCTCTTATTTACGAGTTTATGCCCA
ACGGATCACTTGAGAAATTCATCTTCTCAAAGACAAATAGCTCAAGTCAT
CGTCCATTGAGTTGGGAGAAGCTGAGGAAGATTGCATTTGGCGTTGCCCG
TGGAGTGGAGTACTTGCACCAAGGATGCAACCAAAGGATCCTGCACTTCG
ATATCAAGCCTCACAATATATTATTAGACCATAATTTTCAACCGAAGATT
TCAGATTTTGGGCTGGCTAAGTTGTGCTCTAAGGACATAAGCATTGTATC
TCTGACAGCTGCCAGAGGCACTGCTGGCTACATTGCACCTGAACTTTTCT
CCAGGAATTTTGGTGAGGTCTCTTACAAGTCTGATGTTTACAGTTATGGA
ATGATGCTGTTAGAGATGGTCGGATGCAGAAAAATAATGATCCTGCGGTT
GAAATTCAAGCCAATATATTTTCC
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