FC923270

Overview
NameFC923270
Unique NameFC923270
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length724
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: Y5389_ARATH (Probable receptor-like protein kinase At5g38990 OS=Arabidopsis thaliana GN=At5g38990 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.949e-42
Identity = 92/222 (41.44%), Postives = 142/222 (63.96%), Query Frame = 3
Query:   36 RYTYKELKKITSRFKHRL--GQGGYGSVFRGKLFNRIP-VAVKMLEHLKGNG-QEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSL-TAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCRKI 686
            R++  E+K  T+ F+ +L  G GG+GSV++G++      VAVK LE     G +EF  E+  + ++ H H+V L+G+C + N   L+YE+MP+G+L+  +F + + +S  PLSW++  +I  G ARG++YLH G    I+H DIK  NILLD NF  K+SDFGL+++     S   + T  +GT GY+ PE + R    ++ KSDVYS+G++LLE++ CR I
Sbjct:  512 RFSIYEIKSATNDFEEKLIIGVGGFGSVYKGRIDGGATLVAVKRLEITSNQGAKEFDTELEMLSKLRHVHLVSLIGYCDDDNEMVLVYEYMPHGTLKDHLFRR-DKASDPPLSWKRRLEICIGAARGLQYLHTGAKYTIIHRDIKTTNILLDENFVAKVSDFGLSRVGPTSASQTHVSTVVKGTFGYLDPEYYRRQI--LTEKSDVYSFGVVLLEVLCCRPI 730          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: Y1677_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana GN=At1g67720 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.949e-42
Identity = 88/211 (41.71%), Postives = 140/211 (66.35%), Query Frame = 3
Query:   54 LKKITSRFKHRLGQGGYGSVFRGKLFNRIPVAVKMLEHLKGN-GQEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCRK 683
            L++ T  F  ++G+G +GSV+ G++ +   VAVK+      +  ++F+ EVA + RIHH ++V L+G+C E +RR L+YE+M NGSL   +     SS ++PL W    +IA   A+G+EYLH GCN  I+H D+K  NILLD N + K+SDFGL++   +D++ VS + A+GT GY+ PE ++    +++ KSDVYS+G++L E++  +K
Sbjct:  601 LEEATDNFSKKVGRGSFGSVYYGRMKDGKEVAVKITADPSSHLNRQFVTEVALLSRIHHRNLVPLIGYCEEADRRILVYEYMHNGSLGDHLHG---SSDYKPLDWLTRLQIAQDAAKGLEYLHTGCNPSIIHRDVKSSNILLDINMRAKVSDFGLSRQTEEDLTHVS-SVAKGTVGYLDPEYYASQ--QLTEKSDVYSFGVVLFELLSGKK 805          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: CRK38_ARATH (Cysteine-rich receptor-like protein kinase 38 OS=Arabidopsis thaliana GN=CRK38 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.949e-42
Identity = 95/223 (42.60%), Postives = 142/223 (63.68%), Query Frame = 3
Query:   12 NYRTVNPIRYTYKELKKITS--RFKHRLGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNGQ-EFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 671
            +Y   + +R+ ++ +   T    F++++GQGG+GSV++GKL     +AVK L    G G+ EF NEV  + R+ H ++V+LLGFC+EG+   L+YEF+PN SL+ FIF +        L+W+   +I  GVARG+ YLH+    RI+H D+K  NILLD    PK++DFG+A+L + D +        GT GY+APE + RN    S K+DVYS+G++LLEM+
Sbjct:  318 DYGGQSKLRFDFRMILTATDDFSFENKIGQGGFGSVYKGKLPGGEEIAVKRLTRGSGQGEIEFRNEVLLLTRLQHRNLVKLLGFCNEGDEEILVYEFVPNSSLDHFIFDE---EKRLLLTWDMRARIIEGVARGLVYLHEDSQLRIIHRDLKASNILLDAYMNPKVADFGMARLFNMDQTRAVTRKVVGTFGYMAPE-YVRN-RTFSVKTDVYSFGVVLLEMI 535          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: CRK23_ARATH (Putative cysteine-rich receptor-like protein kinase 23 OS=Arabidopsis thaliana GN=CRK23 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.949e-42
Identity = 90/228 (39.47%), Postives = 139/228 (60.96%), Query Frame = 3
Query:    9 ENYRTVNPIRYTYKELKKITSRFK--HRLGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNGQ-EFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCRK 683
            ++  T   +++ +K +   T+ F   ++LGQGG+G V++G   + + VAVK L    G G+ EF NEV  + ++ H ++VRLLG+C EG  + L+YEF+ N SL+ F+F  T     R L W +  KI  G+ARG+ YLHQ     I+H D+K  NILLD +  PK++DFG+A++   D +  +     GT GY+APE     +G+ S KSDVYS+G+++ E++   K
Sbjct:  486 DSITTAGSLQFDFKAIVAATNNFLPINKLGQGGFGEVYKGTFPSGVQVAVKRLSKTSGQGEREFENEVVVVAKLQHRNLVRLLGYCLEGEEKILVYEFVHNKSLDYFLFDTTMK---RQLDWTRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDADMNPKVADFGMARIFGMDQTEANTRRVVGTYGYMAPEY--AMYGQFSMKSDVYSFGVLVFEIISGMK 708          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: Y5900_ARATH (Putative receptor-like protein kinase At5g39000 OS=Arabidopsis thaliana GN=At5g39000 PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.546e-42
Identity = 93/222 (41.89%), Postives = 142/222 (63.96%), Query Frame = 3
Query:   36 RYTYKELKKITSRFKHRL--GQGGYGSVFRGKLFNRIP-VAVKMLEHLKGNG-QEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSL-TAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCRKI 686
            R++  E+K  T+ F+ +L  G GG+GSV++G++      VAVK LE     G +EF  E+  + ++ H H+V L+G+C E N   L+YE+MP+G+L+  +F + + +S  PLSW++  +I  G ARG++YLH G    I+H DIK  NILLD NF  K+SDFGL+++     S   + T  +GT GY+ PE + R    ++ KSDVYS+G++LLE++ CR I
Sbjct:  505 RFSIFEIKSATNDFEDKLIIGVGGFGSVYKGQIDGGATLVAVKRLEITSNQGAKEFETELEMLSKLRHVHLVSLIGYCDEDNEMVLVYEYMPHGTLKDHLFRR-DKTSDPPLSWKRRLEICIGAARGLQYLHTGAKYTIIHRDIKTTNILLDENFVTKVSDFGLSRVGPTSASQTHVSTVVKGTFGYLDPEYYRRQV--LTEKSDVYSFGVVLLEVLCCRPI 723          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: Y4245_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana GN=At4g20450 PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.546e-42
Identity = 90/222 (40.54%), Postives = 139/222 (62.61%), Query Frame = 3
Query:   27 NPIRYTYKELKKITSRFKHRLGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNG-QEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCRKIM 689
            N   YTY+E+  IT+ F+  LG+GG+G V+ G + +   VAVK+L      G ++F  EV  + R+HH ++V L+G+C EG    LIYE+M NG+L++ +   +  +S  PLSWE   +IA   A+G+EYLH GC   ++H DIK  NILLD+NFQ K+ DFGL++           T   G+ GY+ PE +  N+  ++ KSDV+S+G++LLE++  + ++
Sbjct:  577 NKRSYTYEEVAVITNNFERPLGEGGFGVVYHGNVNDNEQVAVKVLSESSAQGYKQFKAEVDLLLRVHHINLVTLVGYCDEGQHLVLIYEYMSNGNLKQHL---SGENSRSPLSWENRLRIAAETAQGLEYLHIGCKPPMIHRDIKSMNILLDNNFQAKLGDFGLSRSFPVGSETHVSTNVAGSPGYLDPEYYRTNW--LTEKSDVFSFGVVLLEIITSQPVI 793          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: Y2289_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g28960 OS=Arabidopsis thaliana GN=At2g28960 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.343e-42
Identity = 89/219 (40.64%), Postives = 134/219 (61.19%), Query Frame = 3
Query:   36 RYTYKELKKITSRFKHRLGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNG-QEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCRKIM 689
            R+TY E++ +T  F+  LG+GG+G V+ G L    P+AVK+L      G +EF  EV  + R+HH ++V L+G+C E +  AL+YE+ PNG L++ +  +   S   PL W    KI    A+G+EYLH GC   ++H D+K  NILLD +FQ K++DFGL++           TA  GT GY+ PE +  N   ++ KSDVYS+G++LLE++  R ++
Sbjct:  562 RFTYSEVEALTDNFERVLGEGGFGVVYHGILNGTQPIAVKLLSQSSVQGYKEFKAEVELLLRVHHVNLVSLVGYCDEESNLALLYEYAPNGDLKQHLSGERGGS---PLKWSSRLKIVVETAQGLEYLHTGCKPPMVHRDVKTTNILLDEHFQAKLADFGLSRSFPVGGETHVSTAVAGTPGYLDPEYYRTN--RLNEKSDVYSFGIVLLEIITSRPVI 775          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: CRK15_ARATH (Cysteine-rich receptor-like protein kinase 15 OS=Arabidopsis thaliana GN=CRK15 PE=2 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 4.343e-42
Identity = 90/224 (40.18%), Postives = 136/224 (60.71%), Query Frame = 3
Query:   21 TVNPIRYTYKELKKITSRFK--HRLGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNGQ-EFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCRK 683
            T   ++  Y+ ++  T++F   +++GQGG+G V++G   N   VAVK L    G G  EF NEV  + ++ H ++VRLLGF   G  R L+YE+MPN SL+ F+F     +    L W +  K+  G+ARG+ YLHQ     I+H D+K  NILLD +  PK++DFGLA++   D +  + +   GT GY+APE      G+ S KSDVYS+G+++LE++  +K
Sbjct:  319 TTESLQLDYRMIRAATNKFSENNKIGQGGFGEVYKGTFSNGTEVAVKRLSKSSGQGDTEFKNEVVVVAKLQHRNLVRLLGFSIGGGERILVYEYMPNKSLDYFLFDPAKQNQ---LDWTRRYKVIGGIARGILYLHQDSRLTIIHRDLKASNILLDADMNPKLADFGLARIFGMDQTQENTSRIVGTFGYMAPEYAIH--GQFSVKSDVYSFGVLVLEIISGKK 537          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: CRK36_ARATH (Cysteine-rich receptor-like protein kinase 36 OS=Arabidopsis thaliana GN=CRK36 PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 5.672e-42
Identity = 93/203 (45.81%), Postives = 131/203 (64.53%), Query Frame = 3
Query:   78 KHRLGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNGQ-EFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCRK 683
            +++LGQGG+GSV++G L +   +AVK L    G G+ EF NEV  + R+ H ++V+LLGFC+EGN   L+YE +PN SL+ FIF +        L+W+   +I  GVARG+ YLH+    RI+H D+K  NILLD    PK++DFG+A+L + D +    +   GT GY+APE      G+ S KSDVYS+G+MLLEM+   K
Sbjct:  343 ENKLGQGGFGSVYKGILPSGQEIAVKRLAGGSGQGELEFKNEVLLLTRLQHRNLVKLLGFCNEGNEEILVYEHVPNSSLDHFIFDE---DKRWLLTWDVRYRIIEGVARGLLYLHEDSQLRIIHRDLKASNILLDAEMNPKVADFGMARLFNMDETRGETSRVVGTYGYMAPEYV--RHGQFSAKSDVYSFGVMLLEMISGEK 540          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 170.244 bits (430), Expect = 9.674e-42
Identity = 93/214 (43.46%), Postives = 139/214 (64.95%), Query Frame = 3
Query:   39 YTYKELKKITSRF--KHRLGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNGQ-EFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 671
            YT +EL+  T+    ++ +G+GGYG V+RG L +   VAVK L + +G  + EF  EV  IGR+ H ++VRLLG+C EG  R L+Y+F+ NG+LE++I       S  PL+W+    I  G+A+G+ YLH+G   +++H DIK  NILLD  +  K+SDFGLAKL   + S V+ T   GT GY+APE      G ++ KSD+YS+G++++E++
Sbjct:  142 YTLRELEAATNGLCEENVIGEGGYGIVYRGILTDGTKVAVKNLLNNRGQAEKEFKVEVEVIGRVRHKNLVRLLGYCVEGAYRMLVYDFVDNGNLEQWIHGDVGDVS--PLTWDIRMNIILGMAKGLAYLHEGLEPKVVHRDIKSSNILLDRQWNAKVSDFGLAKLLGSESSYVT-TRVMGTFGYVAPEYACT--GMLNEKSDIYSFGILIMEII 350          
The following BLAST results are available for this feature:
BLAST of FC923270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y5389_ARATH1.949e-4241.44Probable receptor-like protein kinase At5g38990 OS... [more]
Y1677_ARATH1.949e-4241.71Probable LRR receptor-like serine/threonine-protei... [more]
CRK38_ARATH1.949e-4242.60Cysteine-rich receptor-like protein kinase 38 OS=A... [more]
CRK23_ARATH1.949e-4239.47Putative cysteine-rich receptor-like protein kinas... [more]
Y5900_ARATH2.546e-4241.89Putative receptor-like protein kinase At5g39000 OS... [more]
Y4245_ARATH2.546e-4240.54Probable LRR receptor-like serine/threonine-protei... [more]
Y2289_ARATH4.343e-4240.64Probable LRR receptor-like serine/threonine-protei... [more]
CRK15_ARATH4.343e-4240.18Cysteine-rich receptor-like protein kinase 15 OS=A... [more]
CRK36_ARATH5.672e-4245.81Cysteine-rich receptor-like protein kinase 36 OS=A... [more]
Y1154_ARATH9.674e-4243.46Probable serine/threonine-protein kinase At1g01540... [more]

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Properties
Property NameValue
Genbank descriptionC31702H06EF StrClemenN Citrus clementina cDNA clone C31702H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923270 ID=FC923270; Name=FC923270; organism=Citrus clementina; type=EST; length=724bp
AGTTCCTCGAAAACTACAGGACCGTCAATCCCATCCGATATACTTACAAA
GAGCTGAAGAAAATAACAAGCAGATTTAAGCACAGGCTCGGCCAGGGAGG
TTACGGAAGCGTGTTCAGAGGAAAACTCTTCAACAGAATTCCAGTTGCTG
TCAAGATGTTGGAACATTTAAAAGGAAATGGACAAGAGTTCATCAATGAA
GTGGCCACAATTGGCAGGATTCACCACTTCCACATTGTTCGGCTTCTGGG
ATTTTGCTCTGAAGGAAACAGACGTGCTCTTATTTACGAGTTTATGCCCA
ACGGATCACTTGAGAAATTCATCTTCTCAAAGACAAATAGCTCAAGTCAT
CGTCCATTGAGTTGGGAGAAGCTGAGGAAGATTGCATTTGGCGTTGCCCG
TGGAGTGGAGTACTTGCACCAAGGATGCAACCAAAGGATCCTGCACTTCG
ATATCAAGCCTCACAATATATTATTAGACCATAATTTTCAACCGAAGATT
TCAGATTTTGGGCTGGCTAAGTTGTGCTCTAAGGACATAAGCATTGTATC
TCTGACAGCTGCCAGAGGCACTGCTGGCTACATTGCACCTGAACTTTTCT
CCAGGAATTTTGGTGAGGTCTCTTACAAGTCTGATGTTTACAGTTATGGA
ATGATGCTGTTAGAGATGGTCGGATGCAGAAAAATAATGATCCTGCGGTT
GAAATTCAAGCCAATATATTTTCC
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