FC923270

Overview
NameFC923270
Unique NameFC923270
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length724
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: CRK33_ARATH (Putative cysteine-rich receptor-like protein kinase 33 OS=Arabidopsis thaliana GN=CRK33 PE=2 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.263e-41
Identity = 90/220 (40.91%), Postives = 132/220 (60.00%), Query Frame = 3
Query:   33 IRYTYKELKKITSRFK--HRLGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNG-QEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCRK 683
            ++Y  K ++  T  F   + LGQGG+G VF+G L +   +AVK L      G QEF NE + + ++ H ++V +LGFC EG  + L+YEF+PN SL++F+F  T       L W K  KI  G ARG+ YLH     +I+H D+K  NILLD   +PK++DFG+A++   D S        GT GYI+PE      G+ S KSDVYS+G+++LE++  ++
Sbjct:  307 LQYDLKTIEAATCTFSKCNMLGQGGFGEVFKGVLQDGSEIAVKRLSKESAQGVQEFQNETSLVAKLQHRNLVGVLGFCMEGEEKILVYEFVPNKSLDQFLFEPTKKGQ---LDWAKRYKIIVGTARGILYLHHDSPLKIIHRDLKASNILLDAEMEPKVADFGMARIFRVDQSRADTRRVVGTHGYISPEYLMH--GQFSVKSDVYSFGVLVLEIISGKR 521          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: CRK11_ARATH (Cysteine-rich receptor-like protein kinase 11 OS=Arabidopsis thaliana GN=CRK11 PE=2 SV=2)

HSP 1 Score: 169.474 bits (428), Expect = 1.650e-41
Identity = 91/224 (40.62%), Postives = 138/224 (61.61%), Query Frame = 3
Query:   21 TVNPIRYTYKELKKITSRFK--HRLGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNG-QEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCRK 683
            T + + Y +K ++  T++F   ++LG+GG+G+V++GKL N   VAVK L    G G +EF NE   + ++ H ++VRLLGFC E   + LIYEF+ N SL+ F+F     S    L W +  KI  G+ARG+ YLHQ    +I+H D+K  NILLD +  PKI+DFGLA +   + +  +     GT  Y++PE      G+ S KSD+YS+G+++LE++  +K
Sbjct:  332 TTDSLVYDFKTIEAATNKFSTSNKLGEGGFGAVYKGKLSNGTDVAVKRLSKKSGQGTREFRNEAVLVTKLQHRNLVRLLGFCLEREEQILIYEFVHNKSLDYFLFDPEKQSQ---LDWTRRYKIIGGIARGILYLHQDSRLKIIHRDLKASNILLDADMNPKIADFGLATIFGVEQTQGNTNRIAGTYAYMSPEYAMH--GQYSMKSDIYSFGVLVLEIISGKK 550          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: Y2899_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g28990 OS=Arabidopsis thaliana GN=At2g28990 PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.815e-41
Identity = 95/232 (40.95%), Postives = 140/232 (60.34%), Query Frame = 3
Query:    9 ENYRTVNPIRYTYKELKKITSRFKHRLGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNG-QEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLC----SKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCRKIM 689
            E+  T   IR+TY E++++T+ F   LG+GG+G V+ G +     VAVK+L      G + F  EV  + R+HH ++V L+G+C EG   ALIYE+MPNG L++ +  K        LSWE   KI    A G+EYLH GC   ++H DIK  NILLD + Q K++DFGL++       K++S    T   GT GY+ PE +  N+  ++ KSD+YS+G++LLE++  R I+
Sbjct:  557 ESSFTSKKIRFTYSEVQEMTNNFDKALGEGGFGVVYHGFVNVIEQVAVKLLSQSSSQGYKHFKAEVELLMRVHHINLVSLVGYCDEGEHLALIYEYMPNGDLKQHLSGKHGGFV---LSWESRLKIVLDAALGLEYLHTGCVPPMVHRDIKTTNILLDQHLQAKLADFGLSRSFPIGNEKNVS----TVVAGTPGYLDPEYYQTNW--LTEKSDIYSFGIVLLEIISNRPII 779          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: CRK12_ARATH (Putative cysteine-rich receptor-like protein kinase 12 OS=Arabidopsis thaliana GN=CRK12 PE=2 SV=2)

HSP 1 Score: 168.318 bits (425), Expect = 3.676e-41
Identity = 90/216 (41.67%), Postives = 130/216 (60.19%), Query Frame = 3
Query:   45 YKELKKITSRFK--HRLGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNG-QEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCRK 683
            +K ++  T  F   ++LGQGG+G V++G L N   VAVK L      G QEF NEV  + ++ H ++V+LLG+C E   + L+YEF+PN SL+ F+F  T       L W K   I  G+ RG+ YLHQ     I+H D+K  NILLD +  PKI+DFG+A++   D S+ +     GT GY+ PE      G+ S KSDVYS+G+++LE++  +K
Sbjct:  357 FKTIEVATENFAKTNKLGQGGFGEVYKGTLVNGTEVAVKRLSKTSEQGAQEFKNEVVLVAKLQHRNLVKLLGYCLEPEEKILVYEFVPNKSLDYFLFDPTKQGQ---LDWTKRYNIIGGITRGILYLHQDSRLTIIHRDLKASNILLDADMIPKIADFGMARISGIDQSVANTKRIAGTFGYMPPEYVIH--GQFSMKSDVYSFGVLILEIICGKK 567          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: Y2296_ARATH (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 4.801e-41
Identity = 94/214 (43.93%), Postives = 135/214 (63.08%), Query Frame = 3
Query:   39 YTYKELKKITSRFK--HRLGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNGQ-EFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 671
            +T ++L+  T+RF   + LG+GGYG V+RGKL N   VAVK L +  G  + EF  EV  IG + H ++VRLLG+C EG  R L+YE++ +G+LE+++        H  L+WE   KI  G A+ + YLH+    +++H DIK  NIL+D  F  K+SDFGLAKL     S ++ T   GT GY+APE    N G ++ KSD+YS+G++LLE +
Sbjct:  171 FTLRDLELATNRFAPVNVLGEGGYGVVYRGKLVNGTEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNSGNLEQWLHGAMRQ--HGNLTWEARMKIITGTAQALAYLHEAIEPKVVHRDIKASNILIDDEFNAKLSDFGLAKLLDSGESHIT-TRVMGTFGYVAPEY--ANTGLLNEKSDIYSFGVLLLEAI 379          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: RLK7_ARATH (Receptor-like protein kinase At5g59670 OS=Arabidopsis thaliana GN=At5g59670 PE=1 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 4.801e-41
Identity = 88/213 (41.31%), Postives = 133/213 (62.44%), Query Frame = 3
Query:   36 RYTYKELKKITSRFKHRLGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNG-QEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 671
            R+TY E+ ++T  F+  LG+GG+G V+ G +     VAVK+L      G +EF  EV  + R+HH ++V L+G+C EG+  AL+YEF+PNG L++ +  K  +S    ++W    +IA   A G+EYLH GC   ++H D+K  NILLD NF+ K++DFGL++    +      T   GT GY+ PE +  + G +  KSDVYS+G++LLEM+
Sbjct:  553 RFTYSEVVQVTKNFQRVLGKGGFGMVYHGTVKGSEQVAVKVLSQSSTQGSKEFKAEVDLLLRVHHTNLVSLVGYCCEGDYLALVYEFLPNGDLKQHLSGKGGNSI---INWSIRLRIALEAALGLEYLHIGCTPPMVHRDVKTANILLDENFKAKLADFGLSRSFQGEGESQESTTIAGTLGYLDPECY--HSGRLGEKSDVYSFGIVLLEMI 760          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: Y1561_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2)

HSP 1 Score: 167.548 bits (423), Expect = 6.271e-41
Identity = 97/223 (43.50%), Postives = 139/223 (62.33%), Query Frame = 3
Query:   24 VNPIRYTYKELKKITSRF--KHRLGQGGYGSVFRGKLFNRIPVAVKMLE--HLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 680
            V P  +TY ELK  T  F   ++LG+GG+G V++G L +   VAVK+L     +G GQ F+ E+  I  + H ++V+L G C EG  R L+YE++PNGSL++ +F   + + H  L W    +I  GVARG+ YLH+  + RI+H D+K  NILLD    P+ISDFGLAKL     + +S T   GT GY+APE   R  G ++ K+DVY++G++ LE+V  R
Sbjct:  677 VKPYIFTYSELKSATQDFDPSNKLGEGGFGPVYKGNLNDGRVVAVKLLSVGSRQGKGQ-FVAEIVAISSVLHRNLVKLYGCCFEGEHRMLVYEYLPNGSLDQALFG--DKTLH--LDWSTRYEICLGVARGLVYLHEEASVRIVHRDVKASNILLDSRLVPQISDFGLAKLYDDKKTHIS-TRVAGTIGYLAPEYAMR--GHLTEKTDVYAFGVVALELVSGR 891          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: SRK6_BRAOE (Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 6.271e-41
Identity = 92/211 (43.60%), Postives = 134/211 (63.51%), Query Frame = 3
Query:   60 KITSRFK--HRLGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNG-QEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCRK 683
            K T  F   ++LGQGG+G V++G+L +   +AVK L      G  EF+NEV  I R+ H ++V++LG C EG+ + LIYE++ N SL+ ++F KT  S    L+W +   I  GVARG+ YLHQ    RI+H D+K  NILLD N  PKISDFG+A++  +D +  +     GT GY++PE     +G  S KSDV+S+G+++LE+V  +K
Sbjct:  523 KATENFSSCNKLGQGGFGIVYKGRLLDGKEIAVKRLSKTSVQGTDEFMNEVTLIARLQHINLVQVLGCCIEGDEKMLIYEYLENLSLDSYLFGKTRRSK---LNWNERFDITNGVARGLLYLHQDSRFRIIHRDLKVSNILLDKNMIPKISDFGMARIFERDETEANTMKVVGTYGYMSPEY--AMYGIFSEKSDVFSFGVIVLEIVSGKK 728          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: RLK6_ARATH (Receptor-like protein kinase At3g21340 OS=Arabidopsis thaliana GN=At3g21340 PE=1 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 6.271e-41
Identity = 92/227 (40.53%), Postives = 139/227 (61.23%), Query Frame = 3
Query:   36 RYTYKELKKITSRFKHRLGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNG-QEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCRKIMILRLKFKP 713
            R+TY E+  +T+ F+  LG+GG+G V+ G + N   VAVKML H    G +EF  EV  + R+HH ++V L+G+C EG   ALIYE+M NG L + +  K   S    L+WE   KI    A+G+EYLH GC   ++H D+K  NILL+ +   K++DFGL++    +      T   GT GY+ PE +  N+  ++ KSDVYS+G++LLE++   +++I + + KP
Sbjct:  581 RFTYSEVVTMTNNFERVLGKGGFGMVYHGTVNNTEQVAVKMLSHSSSQGYKEFKAEVELLLRVHHKNLVGLVGYCDEGENLALIYEYMANGDLREHMSGKRGGSI---LNWETRLKIVVESAQGLEYLHNGCKPPMVHRDVKTTNILLNEHLHAKLADFGLSRSFPIEGETHVSTVVAGTPGYLDPEYYRTNW--LNEKSDVYSFGIVLLEII-TNQLVINQSREKP 801          
BLAST of FC923270 vs. ExPASy Swiss-Prot
Match: Y5188_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51880 OS=Arabidopsis thaliana GN=At1g51880 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.397e-40
Identity = 91/213 (42.72%), Postives = 135/213 (63.38%), Query Frame = 3
Query:   36 RYTYKELKKITSRFKHRLGQGGYGSVFRGKLFNRIPVAVKMLEHLKGNG-QEFINEVATIGRIHHFHIVRLLGFCSEGNRRALIYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLRKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 671
            R TY E+ K+T+ F+  LG+GG+G+V+ G L +   VAVKML H    G +EF  EV  + R+HH ++V L+G+C +G+  ALIYE+M NG L++ +  K   +    L+WE   +IA   A+G+EYLH GC   ++H D+K  NILL+  +  K++DFGL++    D      T   GT GY+ PE +  N+  +S KSDVYS+G++LLE+V
Sbjct:  555 RITYPEVLKMTNNFERVLGKGGFGTVYHGNLEDT-QVAVKMLSHSSAQGYKEFKAEVELLLRVHHRNLVGLVGYCDDGDNLALIYEYMANGDLKENMSGKRGGNV---LTWENRMQIAVEAAQGLEYLHNGCTPPMVHRDVKTTNILLNERYGAKLADFGLSRSFPVDGESHVSTVVAGTPGYLDPEYYRTNW--LSEKSDVYSFGVVLLEIV 761          
The following BLAST results are available for this feature:
BLAST of FC923270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CRK33_ARATH1.263e-4140.91Putative cysteine-rich receptor-like protein kinas... [more]
CRK11_ARATH1.650e-4140.63Cysteine-rich receptor-like protein kinase 11 OS=A... [more]
Y2899_ARATH2.815e-4140.95Probable leucine-rich repeat receptor-like protein... [more]
CRK12_ARATH3.676e-4141.67Putative cysteine-rich receptor-like protein kinas... [more]
Y2296_ARATH4.801e-4143.93Probable receptor-like protein kinase At2g42960 OS... [more]
RLK7_ARATH4.801e-4141.31Receptor-like protein kinase At5g59670 OS=Arabidop... [more]
Y1561_ARATH6.271e-4143.50Probable LRR receptor-like serine/threonine-protei... [more]
SRK6_BRAOE6.271e-4143.60Putative serine/threonine-protein kinase receptor ... [more]
RLK6_ARATH6.271e-4140.53Receptor-like protein kinase At3g21340 OS=Arabidop... [more]
Y5188_ARATH1.397e-4042.72Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionC31702H06EF StrClemenN Citrus clementina cDNA clone C31702H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923270 ID=FC923270; Name=FC923270; organism=Citrus clementina; type=EST; length=724bp
AGTTCCTCGAAAACTACAGGACCGTCAATCCCATCCGATATACTTACAAA
GAGCTGAAGAAAATAACAAGCAGATTTAAGCACAGGCTCGGCCAGGGAGG
TTACGGAAGCGTGTTCAGAGGAAAACTCTTCAACAGAATTCCAGTTGCTG
TCAAGATGTTGGAACATTTAAAAGGAAATGGACAAGAGTTCATCAATGAA
GTGGCCACAATTGGCAGGATTCACCACTTCCACATTGTTCGGCTTCTGGG
ATTTTGCTCTGAAGGAAACAGACGTGCTCTTATTTACGAGTTTATGCCCA
ACGGATCACTTGAGAAATTCATCTTCTCAAAGACAAATAGCTCAAGTCAT
CGTCCATTGAGTTGGGAGAAGCTGAGGAAGATTGCATTTGGCGTTGCCCG
TGGAGTGGAGTACTTGCACCAAGGATGCAACCAAAGGATCCTGCACTTCG
ATATCAAGCCTCACAATATATTATTAGACCATAATTTTCAACCGAAGATT
TCAGATTTTGGGCTGGCTAAGTTGTGCTCTAAGGACATAAGCATTGTATC
TCTGACAGCTGCCAGAGGCACTGCTGGCTACATTGCACCTGAACTTTTCT
CCAGGAATTTTGGTGAGGTCTCTTACAAGTCTGATGTTTACAGTTATGGA
ATGATGCTGTTAGAGATGGTCGGATGCAGAAAAATAATGATCCTGCGGTT
GAAATTCAAGCCAATATATTTTCC
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